| Definition | Streptococcus pseudopneumoniae IS7493 chromosome, complete genome. |
|---|---|
| Accession | NC_015875 |
| Length | 2,190,731 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 29 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 10336..11613 | PHAGE_Cafete_BV_PW1: putative 3'-5' exonuclease/tRNA(Ile) lysidine synthetase; SPPN_00055; phage(gi310831050) | 2e-10 | Click |
| 2 | 11618..12160 | hypoxanthine-guanine phosphoribosyltransferase; SPPN_00060 | N/A | Click |
| 3 | 12176..14134 | PROPHAGE_Escher_Sakai: ATP-dependent metalloprotease; SPPN_00065; phage(gi15833311) | 3e-159 | Click |
| 4 | 14254..14733 | hypothetical protein; SPPN_00070 | N/A | Click |
| 5 | 15051..15158 | hypothetical protein; SPPN_00075 | N/A | Click |
| 6 | 15158..15319 | hypothetical protein; SPPN_00080 | N/A | Click |
| 7 | 15316..15576 | PHAGE_Strept_1: hypothetical protein EJ-1p29; SPPN_00085; phage(gi39653703) | 6e-42 | Click |
| 8 | 15573..16064 | PHAGE_Strept_1: DNA-binding protein; SPPN_00090; phage(gi39653705) | 7e-85 | Click |
| 9 | 16061..16483 | PHAGE_Entero_phiFL2A: YopX superfamily protein; SPPN_00095; phage(gi281416516) | 2e-13 | Click |
| 10 | 16480..16716 | PHAGE_Strept_MM1: hypothetical protein MM1p27; SPPN_00100; phage(gi26553446) | 1e-39 | Click |
| 11 | complement(16737..17090) | PHAGE_Strept_1: transcriptional regulator; SPPN_00105; phage(gi39653708) | 3e-21 | Click |
| 12 | complement(17074..17289) | PHAGE_Strept_1: transcriptional regulator; SPPN_00110; phage(gi39653709) | 3e-23 | Click |
| 13 | 17419..17865 | PHAGE_Strept_1: hypothetical protein EJ-1p36; SPPN_00115; phage(gi39653710) | 8e-79 | Click |
| 14 | complement(17990..18121) | hypothetical protein; SPPN_00120 | N/A | Click |
| 15 | 18316..18386 | tRNA | N/A | Click |
| 16 | 18416..18508 | hypothetical protein; SPPN_00125 | N/A | Click |
| 17 | 18447..18941 | PHAGE_Strept_PH15: putative small subunit of phage terminase; SPPN_00130; phage(gi190151447) | 6e-58 | Click |
| 18 | 18931..20145 | PHAGE_Strept_O1205: hypothetical protein O1205p26; SPPN_00135; phage(gi23455873) | 2e-146 | Click |
| 19 | 20157..21176 | PHAGE_Brocho_BL3: gp4; SPPN_00140; phage(gi327409394) | 1e-55 | Click |
| 20 | 21305..21838 | PHAGE_Bacill_Bastille: deoxyuridine 5'-triphosphate nucleotidohydrolase family protein; SPPN_00145; phage(gi410492302) | 6e-17 | Click |
| 21 | 22412..23962 | PHAGE_Brocho_BL3: gp7; SPPN_00160; phage(gi327409397) | 4e-34 | Click |
| 22 | 24252..24821 | PHAGE_Brocho_BL3: gp8; SPPN_00165; phage(gi327409398) | 2e-15 | Click |
| 23 | 24827..25669 | PHAGE_Strept_5093: major head protein; SPPN_00170; phage(gi238801899) | 3e-104 | Click |
| 24 | 25681..25863 | hypothetical protein; SPPN_00175 | N/A | Click |
| 25 | 25853..26041 | hypothetical protein; SPPN_00180 | N/A | Click |
| 26 | 26043..26354 | hypothetical protein; SPPN_00185 | N/A | Click |
| 27 | 26335..26673 | hypothetical protein; SPPN_00190 | N/A | Click |
| 28 | 26696..27163 | PHAGE_Brocho_BL3: gp12; SPPN_00195; phage(gi327409402) | 8e-16 | Click |
| 29 | 27160..27528 | PHAGE_Bacill_phIS3501: phage protein; SPPN_00200; phage(gi422934335) | 2e-09 | Click |
| 30 | 27531..27944 | PHAGE_Brocho_BL3: gp14; SPPN_00205; phage(gi327409404) | 4e-13 | Click |
| 31 | 27949..28329 | PHAGE_Brocho_BL3: gp15; SPPN_00210; phage(gi327409407) | 1e-08 | Click |
Region 2, total : 46 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 31146..31158 | attL ATAAAGAGATTAT | N/A | Click |
| 2 | 41328..41870 | PHAGE_Strept_SM1: hypothetical protein SM1p53; SPPN_00265; phage(gi32469428) | 9e-18 | Click |
| 3 | 41863..42015 | hypothetical protein; SPPN_00270 | N/A | Click |
| 4 | 42026..42304 | PHAGE_Strept_1: hypothetical protein SpyM3_0729; SPPN_00275; phage(gi28876194) | 8e-09 | Click |
| 5 | 42320..42796 | PHAGE_Strept_1: hypothetical protein EJ-1p69; SPPN_00280; phage(gi39653743) | 2e-69 | Click |
| 6 | 42803..43123 | PHAGE_Strept_1: hypothetical protein EJ-1p70; SPPN_00285; phage(gi39653744) | 7e-27 | Click |
| 7 | 43129..43911 | PHAGE_Strept_1: structural phage protein; SPPN_00290; phage(gi39653739) | 8e-09 | Click |
| 8 | 43920..44237 | hypothetical protein; SPPN_00295 | N/A | Click |
| 9 | 44266..44583 | PHAGE_Strept_MM1: hypothetical protein MM1p22; SPPN_00300; phage(gi15088763) | 7e-56 | Click |
| 10 | 44585..45070 | PHAGE_Strept_MM1: hypothetical protein MM1p23; SPPN_00305; phage(gi15088764) | 2e-63 | Click |
| 11 | 45070..45321 | PHAGE_Strept_MM1: hypothetical protein MM1p24; SPPN_00310; phage(gi15088765) | 2e-32 | Click |
| 12 | 45356..45832 | PHAGE_Strept_2: putative DNA methyltransferase; SPPN_00315; phage(gi28876237) | 2e-58 | Click |
| 13 | 45829..46089 | PHAGE_Strept_1: hypothetical protein EJ-1p29; SPPN_00320; phage(gi39653703) | 2e-41 | Click |
| 14 | 46086..46493 | PHAGE_Entero_phiFL2A: YopX superfamily protein; SPPN_00325; phage(gi281416516) | 3e-11 | Click |
| 15 | 46486..46665 | hypothetical protein; SPPN_00330 | N/A | Click |
| 16 | 46652..47164 | PHAGE_Strept_1: transcriptional regulator; SPPN_00335; phage(gi39653706) | 2e-15 | Click |
| 17 | 47166..47279 | PHAGE_Strept_1: hypothetical protein EJ-1p33; SPPN_00340; phage(gi39653707) | 1e-08 | Click |
| 18 | 47272..47451 | PHAGE_Strept_Sfi21: hypothetical protein Sfi21p42; SPPN_00345; phage(gi19263425) | 7e-05 | Click |
| 19 | 47441..47671 | transcriptional regulator; SPPN_00350 | N/A | Click |
| 20 | 47742..48170 | PHAGE_Temper_1: hypothetical protein phiNIH1.1_22; SPPN_00355; phage(gi16271798) | 3e-27 | Click |
| 21 | complement(48315..48413) | hypothetical protein; SPPN_00360 | N/A | Click |
| 22 | 48459..49001 | PHAGE_Strept_1: site-specific recombinase; SPPN_00365; phage(gi28876169) | 8e-53 | Click |
| 23 | 49215..49511 | PHAGE_Strept_1: hypothetical protein SpyM3_0708; SPPN_00370; phage(gi28876173) | 6e-26 | Click |
| 24 | 49630..49968 | PHAGE_Strept_1: hypothetical protein SpyM3_0709; SPPN_00375; phage(gi28876174) | 6e-07 | Click |
| 25 | 49965..51605 | PHAGE_Lister_B025: putative terminase large subunit; SPPN_00380; phage(gi157325219) | 1e-150 | Click |
| 26 | 51661..52809 | PHAGE_Staphy_P954: HK97 family phage portal protein; SPPN_00385; phage(gi257136404) | 1e-79 | Click |
| 27 | 52790..53512 | PHAGE_Lister_B025: gp4; SPPN_00390; phage(gi157325221) | 2e-57 | Click |
| 28 | 53531..54646 | PHAGE_Staphy_phi5967PVL: phage major capsid protein; SPPN_00395; phage(gi431810272) | 3e-101 | Click |
| 29 | 54660..54950 | PHAGE_Lister_B025: gp7; SPPN_00400; phage(gi157325224) | 1e-13 | Click |
| 30 | 54943..55131 | PHAGE_Strept_1: hypothetical protein SpyM3_0714; SPPN_00405; phage(gi28876179) | 1e-06 | Click |
| 31 | 55118..55507 | PHAGE_Strept_1: hypothetical protein SpyM3_0716; SPPN_00410; phage(gi28876181) | 1e-27 | Click |
| 32 | 55500..55898 | PHAGE_Strept_1: hypothetical protein SpyM3_0717; SPPN_00415; phage(gi28876182) | 4e-25 | Click |
| 33 | 55898..56278 | PHAGE_Strept_1: hypothetical protein SpyM3_0718; SPPN_00420; phage(gi28876183) | 2e-35 | Click |
| 34 | 56265..56891 | PHAGE_Strept_1: putative major tail protein; SPPN_00425; phage(gi28876184) | 8e-32 | Click |
| 35 | 56937..57230 | PHAGE_Strept_1: hypothetical protein SpyM3_0720; SPPN_00430; phage(gi28876185) | 1e-15 | Click |
| 36 | 57314..57415 | hypothetical protein; SPPN_00435 | N/A | Click |
| 37 | 57479..57709 | hypothetical protein; SPPN_00440 | N/A | Click |
| 38 | 57766..61941 | PHAGE_Strept_1: tail tapemeasure protein; SPPN_00445; phage(gi28876187) | 0.0 | Click |
| 39 | 61941..62639 | PHAGE_Lactob_c5: putative tail component; SPPN_00450; phage(gi418488167) | 9e-06 | Click |
| 40 | 62636..63988 | PHAGE_Strept_3: putative platelet-binding protein; SPPN_00455; phage(gi28876272) | 2e-86 | Click |
| 41 | 64166..64402 | hypothetical protein; SPPN_00460 | N/A | Click |
| 42 | 64633..65919 | PHAGE_Megavi_lba: adenylosuccinate synthetase; SPPN_00465; phage(gi448826112) | 1e-71 | Click |
| 43 | 66119..66586 | PHAGE_Microm_MpV1: hypothetical protein; SPPN_00470; phage(gi313768407) | 4e-07 | Click |
| 44 | 66773..67216 | PHAGE_Clostr_st: putative dUTPase; SPPN_00475; phage(gi80159764) | 2e-32 | Click |
| 45 | 67176..67733 | hypothetical protein; SPPN_00480 | N/A | Click |
| 46 | complement(67776..67916) | hypothetical protein; SPPN_00485 | N/A | Click |
| 47 | 67915..69108 | PHAGE_Bacill_W.Ph.: gp46; SPPN_00490; phage(gi371671106) | 1e-06 | Click |
| 48 | 74465..74477 | attR ATAAAGAGATTAT | N/A | Click |
Region 3, total : 33 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1006888..1008003) | PHAGE_Africa_virus: NifS-like protein; SPPN_05285; phage(gi9628230) | 4e-06 | Click |
| 2 | complement(1008013..1008972) | PHAGE_Salmon_PVP_SE1: phosphoribosylpyrophosphate synthetase; SPPN_05290; phage(gi363539618) | 1e-22 | Click |
| 3 | complement(1009085..1009654) | hypothetical protein; SPPN_05295 | N/A | Click |
| 4 | 1009651..1009662 | attL TCATTTTTCTTA | N/A | Click |
| 5 | complement(1009787..1010932) | PHAGE_Strept_6: putative integrase; SPPN_05300; phage(gi28876488) | 3e-71 | Click |
| 6 | complement(1011256..1012020) | PHAGE_Staphy_PT1028: ORF005; SPPN_05305; phage(gi66395169) | 8e-22 | Click |
| 7 | complement(1012022..1012825) | PHAGE_Strept_3: putative cI-like repressor; SPPN_05310; phage(gi28876313) | 3e-25 | Click |
| 8 | 1013006..1013152 | hypothetical protein; SPPN_05315 | N/A | Click |
| 9 | 1013350..1013550 | PHAGE_Strept_DT1: putative cro-like regulatory protein; SPPN_05320; phage(gi9632445) | 1e-10 | Click |
| 10 | 1013701..1013886 | PHAGE_Strept_6: transcriptional regulator; SPPN_05325; phage(gi93007412) | 1e-05 | Click |
| 11 | 1013898..1014095 | PHAGE_Strept_SM1: gp9; SPPN_05330; phage(gi32469440) | 2e-28 | Click |
| 12 | 1014107..1014247 | hypothetical protein; SPPN_05335 | N/A | Click |
| 13 | complement(1014273..1014680) | hypothetical protein; SPPN_05340 | N/A | Click |
| 14 | 1014869..1015021 | hypothetical protein; SPPN_05345 | N/A | Click |
| 15 | 1015061..1015321 | PHAGE_Strept_1: hypothetical protein SpyM3_0705; SPPN_05350; phage(gi28876170) | 9e-05 | Click |
| 16 | 1015368..1016078 | PHAGE_Strept_SM1: gp15; SPPN_05355; phage(gi32469446) | 3e-128 | Click |
| 17 | complement(1016210..1016434) | PHAGE_Strept_PH15: hypothetical protein phiPH15_gp09; SPPN_05360; phage(gi190151424) | 9e-27 | Click |
| 18 | 1016550..1016693 | hypothetical protein; SPPN_05365 | N/A | Click |
| 19 | 1016797..1017087 | PHAGE_Strept_6: hypothetical protein SpyM3_1452; SPPN_05370; phage(gi28876482) | 7e-05 | Click |
| 20 | 1017100..1017423 | PHAGE_Strept_1: hypothetical protein EJ-1p17; SPPN_05375; phage(gi39653691) | 1e-37 | Click |
| 21 | 1017436..1017732 | PHAGE_Strept_SM1: gp18; SPPN_05380; phage(gi32469449) | 3e-07 | Click |
| 22 | 1017725..1018540 | PHAGE_Strept_SM1: gp19; SPPN_05385; phage(gi32469450) | 1e-124 | Click |
| 23 | 1018528..1018686 | PHAGE_Strept_SM1: gp20; SPPN_05390; phage(gi32469451) | 1e-13 | Click |
| 24 | 1018680..1019450 | PHAGE_Strept_SM1: gp21; SPPN_05395; phage(gi32469452) | 8e-126 | Click |
| 25 | 1019465..1019659 | PHAGE_Strept_PH10: hypothetical protein PH10_gp12; SPPN_05400; phage(gi238821329) | 2e-20 | Click |
| 26 | 1019659..1019886 | PHAGE_Strept_PH10: hypothetical protein PH10_gp15; SPPN_05405; phage(gi238821332) | 9e-16 | Click |
| 27 | 1019879..1019980 | hypothetical protein; SPPN_05410 | N/A | Click |
| 28 | 1019973..1020368 | PHAGE_Strept_PH10: hypothetical protein PH10_gp20; SPPN_05415; phage(gi238821337) | 2e-48 | Click |
| 29 | 1020384..1020710 | PHAGE_Strept_SM1: hypothetical protein SM1p55; SPPN_05420; phage(gi32469430) | 4e-37 | Click |
| 30 | 1020713..1021669 | PHAGE_Strept_SM1: gp56; SPPN_05425; phage(gi32469431) | 2e-51 | Click |
| 31 | 1021706..1021852 | hypothetical protein; SPPN_05430 | N/A | Click |
| 32 | 1021846..1022052 | hypothetical protein; SPPN_05435 | N/A | Click |
| 33 | 1022036..1022467 | hypothetical protein; SPPN_05440 | N/A | Click |
| 34 | complement(1022654..1022842) | PHAGE_Strept_PH15: hypothetical protein phiPH15_gp59; SPPN_05445; phage(gi190151474) | 5e-06 | Click |
| 35 | 1029448..1029459 | attR TCATTTTTCTTA | N/A | Click |
Region 4, total : 37 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1708871..1708887 | attL TTTATACTCAATGAAAA | N/A | Click |
| 2 | 1712624..1712635 | attL TGTTTTTCTCCT | N/A | Click |
| 3 | 1715963..1718296 | PHAGE_Bacill_BCJA1c: DEAD box family helicase; SPPN_08965; phage(gi56694884) | 5e-27 | Click |
| 4 | 1718309..1719772 | PHAGE_Acinet_Bphi_B1251: putative restriction-modification protein; SPPN_08970; phage(gi423261981) | 9e-25 | Click |
| 5 | 1719772..1719972 | type I restriction enzyme; SPPN_08975 | N/A | Click |
| 6 | 1719956..1720513 | PHAGE_Cafete_BV_PW1: putative DNA N6-adenine methyltransferase; SPPN_08980; phage(gi310831004) | 1e-08 | Click |
| 7 | 1720570..1721367 | PHAGE_Strept_1: site-specific recombinase; SPPN_08985; phage(gi28876169) | 3e-06 | Click |
| 8 | complement(1721438..1721863) | PHAGE_Lactoc_1: RUS; SPPN_08990; phage(gi13786546) | 2e-24 | Click |
| 9 | complement(1721841..1722203) | PHAGE_Strept_5093: DNA binding protein; SPPN_08995; phage(gi238801890) | 5e-14 | Click |
| 10 | complement(1722216..1722638) | PHAGE_Temper_1: single-strand binding protein; SPPN_09000; phage(gi16271789) | 3e-55 | Click |
| 11 | complement(1722642..1723265) | PHAGE_Strept_phiNJ2: hypothetical protein; SPPN_09005; phage(gi414090250) | 7e-44 | Click |
| 12 | complement(1723276..1723749) | PHAGE_Strept_2: hypothetical protein; SPPN_09010; phage(gi273809759) | 7e-52 | Click |
| 13 | complement(1723877..1724053) | PHAGE_Strept_1: hypothetical protein EJ-1p20; SPPN_09015; phage(gi39653694) | 5e-24 | Click |
| 14 | complement(1724050..1724166) | PHAGE_Strept_1: hypothetical protein EJ-1p19; SPPN_09020; phage(gi39653693) | 1e-17 | Click |
| 15 | complement(1724159..1724257) | PHAGE_Strept_1: hypothetical protein EJ-1p18; SPPN_09025; phage(gi39653692) | 2e-09 | Click |
| 16 | complement(1724274..1724621) | PHAGE_Strept_1: hypothetical protein EJ-1p17; SPPN_09030; phage(gi39653691) | 4e-59 | Click |
| 17 | complement(1724621..1724878) | hypothetical protein; SPPN_09035 | N/A | Click |
| 18 | 1724879..1724890 | attR TGTTTTTCTCCT | N/A | Click |
| 19 | complement(1724966..1725232) | PHAGE_Strept_MM1: hypothetical protein MM1p07; SPPN_09040; phage(gi15088750) | 6e-44 | Click |
| 20 | 1725351..1725590 | PHAGE_Staphy_EW: ORF065; SPPN_09045; phage(gi66395858) | 3e-28 | Click |
| 21 | complement(1725583..1725753) | PHAGE_Staphy_phiETA: hypothetical protein phiETA_08; SPPN_09050; phage(gi17426236) | 6e-09 | Click |
| 22 | complement(1725750..1725893) | hypothetical protein; SPPN_09055 | N/A | Click |
| 23 | 1726011..1726229 | hypothetical protein; SPPN_09060 | N/A | Click |
| 24 | complement(1726354..1726521) | PHAGE_Strept_1: hypothetical protein EJ-1p13; SPPN_09065; phage(gi39653687) | 3e-20 | Click |
| 25 | complement(1726511..1727365) | PHAGE_Strept_1: DnaC protein; SPPN_09070; phage(gi39653686) | 3e-38 | Click |
| 26 | complement(1727375..1728217) | PHAGE_Strept_1: DnaD protein; SPPN_09075; phage(gi39653685) | 1e-71 | Click |
| 27 | complement(1728257..1728469) | PHAGE_Lactob_AQ113: Cro-like protein phage associated; SPPN_09080; phage(gi446730266) | 8e-06 | Click |
| 28 | complement(1728482..1728667) | PHAGE_Strept_1: transcriptional regulator; SPPN_09085; phage(gi39653689) | 1e-07 | Click |
| 29 | 1728816..1729040 | PHAGE_Strept_PH15: hypothetical protein phiPH15_gp09; SPPN_09090; phage(gi190151424) | 9e-27 | Click |
| 30 | 1729215..1729925 | PHAGE_Strept_SM1: gp7; SPPN_09095; phage(gi32469438) | 2e-06 | Click |
| 31 | complement(1729922..1730053) | PHAGE_Strept_PH15: hypothetical protein phiPH15_gp06; SPPN_09100; phage(gi190151421) | 7e-05 | Click |
| 32 | complement(1730223..1730366) | PHAGE_Strept_1: hypothetical protein EJ-1p06; SPPN_09105; phage(gi39653680) | 7e-19 | Click |
| 33 | complement(1730439..1730714) | PHAGE_Strept_1: hypothetical protein EJ-1p05; SPPN_09110; phage(gi39653679) | 8e-46 | Click |
| 34 | 1730884..1731639 | PHAGE_Strept_1: cI repressor; SPPN_09115; phage(gi39653678) | 7e-31 | Click |
| 35 | 1731640..1732404 | PHAGE_Staphy_PT1028: ORF005; SPPN_09120; phage(gi66395169) | 2e-29 | Click |
| 36 | complement(1732855..1732974) | hypothetical protein; SPPN_09125 | N/A | Click |
| 37 | 1733026..1734153 | PHAGE_Strept_MM1: integrase; SPPN_09130; phage(gi15088744) | 0.0 | Click |
| 38 | complement(1734233..1734496) | transposase; SPPN_09135 | N/A | Click |
| 39 | 1734524..1734646 | choline binding protein PcpA; SPPN_09140 | N/A | Click |
| 40 | 1734908..1735165 | PHAGE_Plankt_PaV_LD: ABC transporter; SPPN_09145; phage(gi371496158) | 2e-06 | Click |
| 41 | 1739564..1739580 | attR TTTATACTCAATGAAAA | N/A | Click |