Definition Brucella pinnipedialis B2/94 chromosome chromosome 1, complete sequence.
Accession NC_015857
Length 2,138,342
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 29 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 524443..524457  attL    TTGAATGCAGACAAG  N/A  Click
2 531314..533182  PHAGE_Megavi_lba: putative dTDP-d-glucose 4 6-dehydratase; BPI_I538; phage(gi448825504)  2e-19  Click
3 complement(533169..534176)  glycosyl transferase, group 4 family protein; BPI_I539  N/A  Click
4 534554..534628  tRNA  N/A  Click
5 534835..535653  PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BPI_I541; phage(gi23501424)  5e-25  Click
6 535385..536328  PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; BPI_I542; phage(gi52430457)  0.0  Click
7 536385..536615  PROPHAGE_Brucel_1330: transposase, interruption-C; BPI_I543; phage(gi52430458)  9e-40  Click
8 complement(536642..537034)  PROPHAGE_Brucel_1330: IS711, transposase orfB; BPI_I544; phage(gi23501420)  3e-71  Click
9 complement(537066..537377)  PROPHAGE_Brucel_1330: IS711, transposase orfA; BPI_I545; phage(gi23501419)  1e-54  Click
10 complement(538887..539666)  PHAGE_Burkho_phiE255: gp30, formyl transferase, putative; BPI_I548; phage(gi134288807)  8e-12  Click
11 complement(539693..540547)  WbkB protein; BPI_I549  N/A  Click
12 complement(540544..541302)  PHAGE_Amsact_: putative ATP-binding cassette transporter; BPI_I550; phage(gi9964444)  5e-10  Click
13 complement(541299..542081)  O-antigen export system permease RfbD; BPI_I551  N/A  Click
14 complement(542096..543199)  PHAGE_Bathyc_BpV1: hypothetical protein; BPI_I552; phage(gi313768026)  6e-22  Click
15 complement(543207..544295)  PHAGE_Acanth_1: hypothetical protein ATCV1_Z804L; BPI_I553; phage(gi155371751)  2e-135  Click
16 544631..545242  PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BPI_I554; phage(gi23501424)  4e-80  Click
17 545565..546359  PHAGE_RD114_retrovirus: gag-pol precursor polyprotein; BPI_I556; phage(gi157939613)  1e-05  Click
18 546451..546762  PROPHAGE_Brucel_1330: IS711, transposase orfA; BPI_I557; phage(gi23501419)  6e-54  Click
19 546794..547186  PROPHAGE_Brucel_1330: IS711, transposase orfB; BPI_I558; phage(gi23501420)  3e-71  Click
20 547187..547426  PROPHAGE_Brucel_1330: ISBm1, transposase orfB, interruption-C; BPI_I559; phage(gi52430460)  3e-41  Click
21 547557..548675  PHAGE_Ostreo_2: putative glycosyl transferase, group 1; BPI_I560; phage(gi314055103)  4e-05  Click
22 548733..549101  PROPHAGE_Brucel_1330: IS5 family transposase orfA; BPI_I561; phage(gi23501422)  1e-66  Click
23 549197..549538  PROPHAGE_Brucel_1330: IS5 family transposase orfB; BPI_I562; phage(gi23501423)  2e-62  Click
24 complement(549628..550215)  PROPHAGE_Escher_CFT073: transposase insF; BPI_I563; phage(gi26249410)  2e-29  Click
25 550295..550774  PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BPI_I564; phage(gi23501424)  3e-78  Click
26 550693..551109  PROPHAGE_Brucel_1330: ISBm1, transposase orfB; BPI_I565; phage(gi23501425)  2e-75  Click
27 complement(551006..551323)  transposase IS3/IS911 family protein; BPI_I566  N/A  Click
28 551469..551768  PROPHAGE_Xantho_306: transposase; BPI_I567; phage(gi21243165)  8e-31  Click
29 complement(552794..553186)  PROPHAGE_Brucel_1330: IS711, transposase orfB; BPI_I569; phage(gi23501420)  3e-71  Click
30 complement(553218..553529)  PROPHAGE_Brucel_1330: IS711, transposase orfA; BPI_I570; phage(gi23501419)  1e-54  Click
31 553604..553618  attR    TTGAATGCAGACAAG  N/A  Click
32 554206..555630  PHAGE_Acanth_1: hypothetical protein ATCV1_Z752L; BPI_I571; phage(gi155371699)  5e-15  Click
Region 2, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 603525..604679  PHAGE_Strept_6: terminase large subunit; BPI_I622; phage(gi93007440)  5e-59  Click
2 604711..605904  PHAGE_Marino_P12026: phage portal protein, HK97 family; BPI_I623; phage(gi399528319)  2e-18  Click
3 605901..606278  hypothetical protein; BPI_I624  N/A  Click
4 606265..606933  PHAGE_Marino_P12026: phage prohead protease; BPI_I625; phage(gi399528321)  2e-31  Click
5 606955..608229  PHAGE_Entero_phiP27: putative major capsid protein; BPI_I626; phage(gi18249904)  1e-87  Click
6 608433..608960  PHAGE_Rhodob_RcapNL: hypothetical protein; BPI_I627; phage(gi461474967)  4e-07  Click
7 608957..609295  PHAGE_Marino_P12026: phage head-tail adaptor; BPI_I628; phage(gi399528325)  2e-06  Click
8 609292..609459  hypothetical protein; BPI_I629  N/A  Click
9 609419..609826  PHAGE_Marino_P12026: hypothetical protein; BPI_I630; phage(gi399528327)  3e-05  Click
10 609867..610280  PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; BPI_I631; phage(gi461474972)  2e-19  Click
11 610283..610618  gene transfer agent (GTA) like protein; BPI_I632  N/A  Click
12 610837..611382  PHAGE_Vibrio_vB_VpaS_MAR10: tail tape measure protein; BPI_I634; phage(gi428782128)  7e-13  Click
13 611385..612017  PHAGE_Roseob_1: putative glycoside hydrolase; BPI_I635; phage(gi331028135)  3e-33  Click
14 612014..612889  PHAGE_Caulob_CcrColossus: putative tail protein; BPI_I636; phage(gi414088176)  6e-19  Click
15 612886..613320  PHAGE_Roseob_1: phage cell wall peptidase; BPI_I637; phage(gi331028137)  4e-30  Click
16 613324..617187  PHAGE_Roseob_1: gene transfer agent; BPI_I638; phage(gi331028138)  1e-179  Click