Definition Clostridium sp. SY8519, complete genome.
Accession NC_015737
Length 2,835,737
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 18 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(59678..59875)  PHAGE_Staphy_X2: ORF083; CXIVA_00560; phage(gi66394730)  4e-16  Click
2 complement(59939..60244)  PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_33; CXIVA_00570; phage(gi13487834)  3e-10  Click
3 complement(60231..60434)  Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; CXIVA_00580  N/A  Click
4 complement(60428..60694)  hypothetical protein; CXIVA_00590  N/A  Click
5 complement(60879..61049)  hypothetical protein; CXIVA_00600  N/A  Click
6 complement(61046..61486)  hypothetical protein; CXIVA_00610  N/A  Click
7 complement(61491..62015)  hypothetical protein; CXIVA_00620  N/A  Click
8 complement(62180..62371)  PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_33; CXIVA_00630; phage(gi13487834)  1e-09  Click
9 complement(62368..62529)  hypothetical protein; CXIVA_00640  N/A  Click
10 complement(62533..62742)  ribonuclease HI; CXIVA_00650  N/A  Click
11 complement(62774..63037)  PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_33; CXIVA_00660; phage(gi13487834)  2e-08  Click
12 complement(63065..63250)  hypothetical protein; CXIVA_00670  N/A  Click
13 complement(63244..63486)  hypothetical protein; CXIVA_00680  N/A  Click
14 complement(63613..64074)  PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_33; CXIVA_00690; phage(gi13487834)  5e-17  Click
15 complement(64074..64292)  hypothetical protein; CXIVA_00700  N/A  Click
16 complement(64305..65192)  PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_32; CXIVA_00710; phage(gi13487833)  3e-21  Click
17 complement(65287..65922)  PHAGE_Strept_Dp_1: minor capsid protein; CXIVA_00720; phage(gi327198355)  4e-07  Click
18 complement(66376..66582)  hypothetical protein; CXIVA_00730  N/A  Click
19 67123..68289  PROPHAGE_Escher_CFT073: transposase; CXIVA_00740; phage(gi26248352)  1e-19  Click
Region 2, total : 33 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(149952..150761)  PHAGE_Clostr_st: putative N-acetylmuramoyl-L-alanine amidase; CXIVA_01560; phage(gi80159841)  2e-10  Click
2 complement(150748..151092)  PHAGE_Staphy_StB27: holin; CXIVA_01570; phage(gi431809728)  2e-12  Click
3 complement(151105..151476)  hypothetical protein; CXIVA_01580  N/A  Click
4 complement(151513..151929)  hypothetical protein; CXIVA_01590  N/A  Click
5 complement(151932..152333)  hypothetical protein; CXIVA_01600  N/A  Click
6 complement(152333..152671)  amino acid ABC transporter; CXIVA_01610  N/A  Click
7 complement(152708..152917)  PLP-dependent aminotransferase; CXIVA_01620  N/A  Click
8 complement(152950..153897)  PHAGE_Entero_mEp460: side tail fiber protein; CXIVA_01630; phage(gi428782336)  8e-09  Click
9 complement(153897..154436)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p26; CXIVA_01640; phage(gi134287360)  9e-10  Click
10 complement(154436..155572)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p25; CXIVA_01650; phage(gi134287359)  1e-62  Click
11 complement(155565..155981)  PHAGE_Strept_1: hypothetical protein EJ-1p60; CXIVA_01660; phage(gi39653734)  5e-13  Click
12 complement(155983..156270)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p23; CXIVA_01670; phage(gi134287358)  1e-09  Click
13 complement(156260..158209)  PHAGE_Clostr_phiC2: putative hydrolase; CXIVA_01680; phage(gi134287357)  1e-69  Click
14 complement(158238..159068)  PHAGE_Clostr_phiC2: putative LysM; CXIVA_01690; phage(gi134287356)  7e-19  Click
15 complement(159068..161278)  PHAGE_Clostr_phiC2: putative tail tape measure protein; CXIVA_01700; phage(gi134287355)  8e-36  Click
16 complement(161282..161401)  hypothetical protein; CXIVA_01710  N/A  Click
17 complement(161461..161895)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p16; CXIVA_01720; phage(gi134287351)  4e-21  Click
18 complement(162004..162489)  PHAGE_Clostr_phiC2: putative core tail; CXIVA_01730; phage(gi134287349)  2e-11  Click
19 complement(162511..163848)  PHAGE_Clostr_phiC2: putative sheath tail protein; CXIVA_01740; phage(gi134287348)  1e-76  Click
20 complement(163845..164057)  imidazoleglycerol-phosphate synthase; CXIVA_01750  N/A  Click
21 complement(164099..164539)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p12; CXIVA_01760; phage(gi134287347)  2e-12  Click
22 complement(164539..164973)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p11; CXIVA_01770; phage(gi134287346)  5e-13  Click
23 complement(164978..165358)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p10; CXIVA_01780; phage(gi134287345)  5e-08  Click
24 complement(165361..165720)  hypothetical protein; CXIVA_01790  N/A  Click
25 complement(165786..166775)  PHAGE_Entero_phiFL3A: coat protein; CXIVA_01800; phage(gi281416261)  3e-82  Click
26 complement(166810..167445)  PHAGE_Strept_Dp_1: minor capsid protein; CXIVA_01810; phage(gi327198355)  9e-07  Click
27 complement(167597..167875)  PHAGE_Strept_MM1: hypothetical protein MM1p19; CXIVA_01820; phage(gi15088761)  2e-06  Click
28 complement(167946..168194)  PHAGE_Lactob_1: hypothetical protein lb338_phage_74; CXIVA_01830; phage(gi226377704)  9e-21  Click
29 complement(168320..168394)  tRNA  N/A  Click
30 complement(168506..170035)  PHAGE_Clostr_phiC2: putative head morphogenesis protein; CXIVA_01840; phage(gi134287339)  2e-91  Click
31 complement(170032..171546)  PHAGE_Clostr_phiC2: putative portal protein; CXIVA_01850; phage(gi134287338)  3e-65  Click
32 complement(171561..173093)  PHAGE_Staphy_37: ORF009; CXIVA_01860; phage(gi66395738)  1e-123  Click
33 complement(173224..173415)  hypothetical protein; CXIVA_01870  N/A  Click
34 173848..174240  PHAGE_Bacill_phi105: hypothetical protein phi105_48; CXIVA_01880; phage(gi22855041)  3e-15  Click
Region 3, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 748905..748916  attL    TTCTCCTTTTTT  N/A  Click
2 complement(756407..758278)  PHAGE_Clostr_phiMMP04: DNA polymerase III alpha subunit; CXIVA_07100; phage(gi414090475)  5e-17  Click
3 complement(758458..760035)  PHAGE_Bacill_Fah: site-specific serine recombinase; CXIVA_07110; phage(gi89152504)  1e-25  Click
4 complement(760020..761753)  PHAGE_Bacill_Fah: site-specific serine recombinase; CXIVA_07120; phage(gi89152504)  2e-24  Click
5 complement(761810..761974)  hypothetical protein; CXIVA_07130  N/A  Click
6 complement(761964..762389)  hypothetical protein; CXIVA_07140  N/A  Click
7 complement(762710..764029)  PHAGE_Clostr_phiSM101: autolytic lysozyme; CXIVA_07150; phage(gi110804057)  2e-17  Click
8 complement(764030..764443)  PHAGE_Bacill_Fah: holin; CXIVA_07160; phage(gi89152494)  8e-26  Click
9 complement(764460..766073)  PHAGE_Lactob_c5: putative antireceptor; CXIVA_07170; phage(gi418488169)  2e-27  Click
10 complement(766086..766970)  PHAGE_Cronob_ESP2949_1: tail fiber; CXIVA_07180; phage(gi422935481)  5e-10  Click
11 complement(766967..767974)  hypothetical protein; CXIVA_07190  N/A  Click
12 complement(767976..769679)  PHAGE_Entero_phiFL4A: tail tape measure protein; CXIVA_07200; phage(gi281416482)  1e-39  Click
13 778421..778432  attR    TTCTCCTTTTTT  N/A  Click