Definition Clostridium acetobutylicum DSM 1731 chromosome, complete genome.
Accession NC_015687
Length 3,942,462
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 12 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1994467..1994478  attL    ATAAATTTATTA  N/A  Click
2 2007845..2008363  PHAGE_Lactob_LP65: hypothetical protein LP65_gp086; SMB_G1879; phage(gi56693134)  2e-07  Click
3 complement(2008389..2008535)  hypothetical protein; SMB_G1880  N/A  Click
4 complement(2008577..2009314)  PHAGE_Staphy_K: putative ribonuclease; SMB_G1881; phage(gi48696415)  5e-14  Click
5 complement(2009330..2010700)  PHAGE_Pseudo_LIT1: N4 gp25-like protein; SMB_G1882; phage(gi282598882)  5e-11  Click
6 complement(2010697..2011830)  PHAGE_Vibrio_VBP47: ATPase; SMB_G1883; phage(gi472340581)  2e-15  Click
7 complement(2011842..2012480)  PHAGE_Acanth_moumouvirus: hypothetical protein; SMB_G1884; phage(gi441432748)  3e-09  Click
8 2012785..2013771  hypothetical protein; SMB_G1885  N/A  Click
9 2013799..2014080  flavodoxin oxidoreductase; SMB_G1886  N/A  Click
10 complement(2014251..2014919)  PHAGE_Entero_EPS7: putative phage tail protein; SMB_G1887; phage(gi182682945)  6e-05  Click
11 complement(2014947..2015267)  hypothetical protein; SMB_G1888  N/A  Click
12 2015507..2015518  attR    ATAAATTTATTA  N/A  Click
13 complement(2015598..2015774)  hypothetical protein; SMB_G1889  N/A  Click
14 2015853..2017433  PHAGE_Bacill_BMBtp2: resolvase; SMB_G1890; phage(gi431809469)  3e-28  Click
Region 2, total : 86 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2019331..2019342  attL    TTTTACTTTATA  N/A  Click
2 2019687..2019699  attL    TTAGTAATTTAAA  N/A  Click
3 complement(2024272..2025327)  PHAGE_Clostr_phiSM101: autolytic lysozyme; SMB_G1901; phage(gi110804057)  3e-20  Click
4 complement(2025345..2025602)  PHAGE_Clostr_phiSM101: hypothetical protein; SMB_G1902; phage(gi110804030)  5e-05  Click
5 complement(2025614..2025880)  hypothetical protein; SMB_G1903  N/A  Click
6 complement(2025910..2030121)  PHAGE_Clostr_phiCTP1: hypothetical phage structural protein; SMB_G1904; phage(gi304360688)  5e-82  Click
7 complement(2030153..2030527)  PHAGE_Clostr_phiSM101: hypothetical protein; SMB_G1905; phage(gi110804056)  1e-22  Click
8 complement(2030514..2030780)  PHAGE_Lactoc_bIL285: Orf59; SMB_G1906; phage(gi13095739)  1e-05  Click
9 complement(2030799..2032007)  PHAGE_Clostr_phiSM101: hypothetical protein; SMB_G1907; phage(gi110804045)  8e-10  Click
10 complement(2032009..2037468)  PHAGE_Clostr_phiSM101: phage tail tape measure protein, TP901 family, core region domain protein; SMB_G1908; phage(gi110804068)  6e-90  Click
11 complement(2037502..2037657)  hypothetical protein; SMB_G1909  N/A  Click
12 complement(2037684..2038013)  hypothetical protein; SMB_G1910  N/A  Click
13 complement(2038067..2038987)  PHAGE_Clostr_phiSM101: phage major tail protein, phi13 family subfamily; SMB_G1911; phage(gi110804026)  3e-19  Click
14 complement(2039032..2039355)  PHAGE_Clostr_PhiS63: gp10; SMB_G1912; phage(gi388570639)  2e-06  Click
15 complement(2039352..2039783)  PHAGE_Bacill_Fah: head-tail joining protein; SMB_G1913; phage(gi89152487)  2e-05  Click
16 complement(2039784..2040131)  PHAGE_Clostr_phiSM101: putative phage head-tail adaptor; SMB_G1914; phage(gi110804032)  7e-08  Click
17 complement(2040094..2040411)  PHAGE_Lactob_Sha1: phage protein DNA packaging protein; SMB_G1915; phage(gi418489807)  6e-12  Click
18 complement(2040699..2041889)  PHAGE_Staphy_phi7401PVL: phage major capsid protein; SMB_G1917; phage(gi448244667)  1e-73  Click
19 complement(2041891..2042661)  PHAGE_Lactob_JCL1032: putative ClpP protease; SMB_G1918; phage(gi418489116)  5e-62  Click
20 complement(2042624..2043883)  PHAGE_Staphy_phi7401PVL: portal protein; SMB_G1919; phage(gi448244665)  3e-90  Click
21 complement(2043880..2045670)  PHAGE_Lactob_JCL1032: putative terminase large subunit; SMB_G1920; phage(gi418489114)  0.0  Click
22 complement(2045645..2046100)  PHAGE_Geobac_E2: putative terminase small subunit; SMB_G1921; phage(gi148747728)  1e-31  Click
23 complement(2046276..2046587)  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp43; SMB_G1922; phage(gi156603992)  1e-19  Click
24 complement(2046594..2046857)  hypothetical protein; SMB_G1923  N/A  Click
25 complement(2046952..2047329)  PHAGE_Bacill_BCP78: hypothetical protein; SMB_G1924; phage(gi410492926)  1e-10  Click
26 complement(2047322..2047501)  Phage regulatory CoM-like protein, containing Zn-finger; SMB_G1925  N/A  Click
27 complement(2047489..2047842)  hypothetical protein; SMB_G1926  N/A  Click
28 complement(2047877..2048074)  hypothetical protein; SMB_G1927  N/A  Click
29 complement(2048034..2048252)  hypothetical protein; SMB_G1928  N/A  Click
30 complement(2048264..2048425)  metal-dependent hydrolase; SMB_G1929  N/A  Click
31 complement(2048556..2048750)  PHAGE_Clostr_phiSM101: hypothetical protein; SMB_G1930; phage(gi110804039)  7e-06  Click
32 complement(2048895..2049245)  PHAGE_Bacill_SP10: metal-dependent hydrolase; SMB_G1931; phage(gi418489659)  1e-06  Click
33 complement(2049263..2049451)  hypothetical protein; SMB_G1932  N/A  Click
34 complement(2049455..2049655)  hypothetical protein; SMB_G1933  N/A  Click
35 complement(2049670..2049834)  hypothetical protein; SMB_G1934  N/A  Click
36 complement(2049840..2050037)  hypothetical protein; SMB_G1935  N/A  Click
37 complement(2050092..2050244)  Large subunit of NADH-dependent glutamate; SMB_G1936  N/A  Click
38 complement(2050291..2050908)  PHAGE_Thermu_TMA: DNA polymerase; SMB_G1937; phage(gi343960414)  2e-10  Click
39 complement(2050921..2051796)  hypothetical protein; SMB_G1938  N/A  Click
40 2052185..2052406  hypothetical protein; SMB_G1939  N/A  Click
41 complement(2052437..2052649)  PHAGE_Entero_phiEf11: conserved hypothetical protein; SMB_G1940; phage(gi282598725)  3e-17  Click
42 complement(2052702..2052920)  Zn-finger containing protein; SMB_G1941  N/A  Click
43 complement(2053151..2053423)  hypothetical protein; SMB_G1942  N/A  Click
44 complement(2053596..2054123)  PHAGE_Clostr_phi3626: Gp43 protein; SMB_G1943; phage(gi20066006)  4e-18  Click
45 complement(2054255..2054446)  hypothetical protein; SMB_G1944  N/A  Click
46 complement(2054494..2054835)  hypothetical protein; SMB_G1945  N/A  Click
47 complement(2054918..2055139)  hypothetical protein; SMB_G1946  N/A  Click
48 complement(2055186..2055587)  PHAGE_Brocho_NF5: gp45; SMB_G1947; phage(gi327197630)  5e-32  Click
49 complement(2055592..2055774)  Zn-finger containing protein; SMB_G1948  N/A  Click
50 complement(2055774..2056058)  hypothetical protein; SMB_G1949  N/A  Click
51 complement(2056146..2056343)  hypothetical protein; SMB_G1950  N/A  Click
52 complement(2056355..2056687)  PHAGE_Clostr_phiSM101: hypothetical protein; SMB_G1951; phage(gi110804067)  8e-07  Click
53 complement(2056688..2057191)  hypothetical protein; SMB_G1952  N/A  Click
54 complement(2057154..2057648)  hypothetical protein; SMB_G1954  N/A  Click
55 complement(2057645..2057797)  Nitroreductase family protein; SMB_G1955  N/A  Click
56 complement(2057790..2058167)  PHAGE_Clostr_phiSM101: hypothetical protein; SMB_G1956; phage(gi110804041)  1e-11  Click
57 complement(2058160..2058426)  hypothetical protein; SMB_G1957  N/A  Click
58 complement(2058542..2058757)  hypothetical protein; SMB_G1958  N/A  Click
59 complement(2058794..2059165)  PHAGE_Halovi_HVTV_1: MazG-like protein; SMB_G1959; phage(gi443404610)  8e-14  Click
60 complement(2059155..2059349)  hypothetical protein; SMB_G1960  N/A  Click
61 complement(2059440..2059967)  hypothetical protein; SMB_G1961  N/A  Click
62 complement(2059977..2060825)  PHAGE_Bacill_IEBH: DNA replication protein DnaC; SMB_G1962; phage(gi197261519)  2e-41  Click
63 complement(2060764..2061603)  PHAGE_Strept_SM1: gp19; SMB_G1963; phage(gi32469450)  4e-50  Click
64 complement(2061704..2062015)  hypothetical protein; SMB_G1964  N/A  Click
65 complement(2062026..2062715)  PHAGE_Lactoc_ul36: putative translation initiation factor; SMB_G1965; phage(gi21716084)  3e-09  Click
66 complement(2062716..2062853)  hypothetical protein; SMB_G1966  N/A  Click
67 complement(2062858..2063433)  PHAGE_Strept_Dp_1: hypothetical protein; SMB_G1967; phage(gi327198335)  2e-18  Click
68 complement(2063436..2063630)  hypothetical protein; SMB_G1968  N/A  Click
69 complement(2063681..2063884)  hypothetical protein; SMB_G1969  N/A  Click
70 complement(2063889..2064128)  PHAGE_Bacill_phBC6A51: Transcription state regulatory protein abrB; SMB_G1970; phage(gi31415778)  2e-16  Click
71 complement(2064255..2064407)  flavoprotein; SMB_G1971  N/A  Click
72 complement(2064420..2064608)  hypothetical protein; SMB_G1972  N/A  Click
73 2064692..2065180  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1454; SMB_G1973; phage(gi41179299)  1e-25  Click
74 complement(2065169..2065609)  hypothetical protein; SMB_G1974  N/A  Click
75 complement(2065623..2066357)  PHAGE_Brocho_BL3: gp34; SMB_G1975; phage(gi327409426)  1e-18  Click
76 complement(2066385..2066534)  MarR/EmrR family transcriptional regulator; SMB_G1976  N/A  Click
77 complement(2066624..2066908)  phage related transcriptional regulator; SMB_G1977  N/A  Click
78 2067116..2067487  PHAGE_Clostr_PhiS63: gp26; SMB_G1978; phage(gi388570671)  3e-09  Click
79 2067636..2067881  hypothetical protein; SMB_G1979  N/A  Click
80 complement(2067892..2069082)  PHAGE_Megavi_chiliensis: putative DNA mismatch repair protein muts-like protein; SMB_G1980; phage(gi363540756)  2e-06  Click
81 2069416..2069628  hypothetical protein; SMB_G1981  N/A  Click
82 2069639..2071366  PHAGE_Strept_phiNJ2: putative recombinase; SMB_G1982; phage(gi414090258)  4e-38  Click
83 2071366..2071575  hypothetical protein; SMB_G1983  N/A  Click
84 complement(2071670..2072056)  hypothetical protein; SMB_G1984  N/A  Click
85 complement(2072272..2073102)  hypothetical protein; SMB_G1985  N/A  Click
86 complement(2073471..2073635)  anaerobic cobalt chelatase CbiK; SMB_G1986  N/A  Click
87 2073655..2073667  attR    TTAGTAATTTAAA  N/A  Click
88 complement(2073663..2073839)  hypothetical protein; SMB_G1987  N/A  Click
89 2073955..2075550  PHAGE_Lister_A118: putative integrase; SMB_G1988; phage(gi16798814)  4e-34  Click
90 2085421..2085432  attR    TTTTACTTTATA  N/A  Click