Definition Oligotropha carboxidovorans OM5 chromosome, complete genome.
Accession NC_015684
Length 3,595,748
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1577389..1578564  PHAGE_Marino_P12026: phage portal protein, HK97 family; OCA5_c14570; phage(gi399528319)  9e-25  Click
2 1578638..1578898  hypothetical protein; OCA5_c14580  N/A  Click
3 1579309..1579824  PHAGE_Tetras_SI1: phage prohead protease; OCA5_c14590; phage(gi472342256)  3e-20  Click
4 1580067..1580531  hypothetical protein; OCA5_c14600  N/A  Click
5 1580661..1581929  PHAGE_Salmon_ST64B: Major capsid protein precursor; OCA5_c14610; phage(gi23505451)  2e-83  Click
6 1582029..1582394  hypothetical protein; OCA5_c14620  N/A  Click
7 1582539..1582790  hypothetical protein; OCA5_c14630  N/A  Click
8 complement(1583139..1583897)  serine protease; OCA5_c14640  N/A  Click
9 1583953..1584522  PHAGE_Rhodob_RcapNL: hypothetical protein; OCA5_c14650; phage(gi461474967)  2e-14  Click
10 1584519..1584839  PHAGE_Burkho_2: gp9, phage head-tail adaptor, putative; OCA5_c14660; phage(gi134288641)  5e-06  Click
11 1584873..1585283  PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; OCA5_c14670; phage(gi461474971)  5e-15  Click
12 1585317..1585724  PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; OCA5_c14680; phage(gi461474972)  1e-23  Click
13 1585734..1586078  hypothetical protein; OCA5_c14690  N/A  Click
14 1586075..1586278  hypothetical protein; OCA5_c14700  N/A  Click
15 1586275..1586865  PHAGE_Entero_2009a: putative bacteriophage tail tape measure protein; OCA5_c14710; phage(gi225220098)  4e-17  Click
16 1586982..1587623  PHAGE_Roseob_1: putative glycoside hydrolase; OCA5_c14720; phage(gi331028135)  2e-35  Click
17 1587620..1588510  PHAGE_Tetras_SI1: hypothetical protein; OCA5_c14730; phage(gi472342235)  7e-28  Click
18 1588519..1588962  PHAGE_Roseob_1: phage cell wall peptidase; OCA5_c14740; phage(gi331028137)  2e-31  Click
19 1588962..1592831  PHAGE_Tetras_SI1: hypothetical protein; OCA5_c14750; phage(gi472342233)  7e-41  Click
20 1592838..1594307  PHAGE_Tetras_SI1: hypothetical protein; OCA5_c14760; phage(gi472342232)  5e-11  Click
21 complement(1594348..1595019)  PHAGE_Acanth_mimivirus: putative WbbJ Acetyltransferase; OCA5_c14770; phage(gi311977514)  2e-09  Click
22 1595124..1595654  PHAGE_Gifsy_1: bacteriophage lysin protein; endolysin; OCA5_c14780; phage(gi169257239)  7e-20  Click
Region 2, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2010971..2010989  attL    TGGCGGAAGGGGTGTCCGC  N/A  Click
2 2011089..2012261  PROPHAGE_Mesorh_MAFF303099: phage integrase; OCA5_c18560; phage(gi13473443)  6e-89  Click
3 2012407..2012649  transcriptional regulator; OCA5_c18570  N/A  Click
4 2012646..2012849  hypothetical protein; OCA5_c18580  N/A  Click
5 2013051..2014916  ATPase; OCA5_c18590  N/A  Click
6 2015149..2015817  hypothetical protein; OCA5_c18600  N/A  Click
7 2015989..2016927  hypothetical protein; OCA5_c18610  N/A  Click
8 2016934..2017170  hypothetical protein; OCA5_c18620  N/A  Click
9 2017170..2018390  PHAGE_Burkho_phiE125: putative portal protein; OCA5_c18630; phage(gi17975165)  8e-42  Click
10 2018387..2018920  PHAGE_Entero_phiP27: putative prohead protease; OCA5_c18640; phage(gi18249903)  2e-28  Click
11 2018928..2020076  PHAGE_Entero_phiP27: putative major capsid protein; OCA5_c18650; phage(gi18249904)  6e-46  Click
12 2020134..2020520  PHAGE_Azospi_Cd: hypothetical protein APCd_gp34; OCA5_c18660; phage(gi168495137)  6e-10  Click
13 2020834..2021007  hypothetical protein; OCA5_c18670  N/A  Click
14 2021286..2021585  phage-like protein; OCA5_c18680  N/A  Click
15 2021582..2021989  PHAGE_Entero_phiP27: hypothetical protein P27p35; OCA5_c18690; phage(gi18249899)  4e-09  Click
16 2021989..2022324  PHAGE_Marino_P12026: phage head-tail adaptor; OCA5_c18700; phage(gi399528325)  2e-05  Click
17 2022324..2023928  PHAGE_Entero_phiP27: putative terminase; OCA5_c18710; phage(gi18249900)  5e-43  Click
18 2023998..2024534  hypothetical protein; OCA5_c18720  N/A  Click
19 complement(2024547..2025440)  hypothetical protein; OCA5_c18730  N/A  Click
20 complement(2025446..2026918)  hypothetical protein; OCA5_c18740  N/A  Click
21 complement(2027158..2027733)  hypothetical protein; OCA5_c18750  N/A  Click
22 2027909..2028154  hypothetical protein; OCA5_c18760  N/A  Click
23 2028266..2028284  attR    TGGCGGAAGGGGTGTCCGC  N/A  Click
24 2028423..2029640  PROPHAGE_Mesorh_MAFF303099: phage integrase; OCA5_c18770; phage(gi13473443)  2e-103  Click
Region 3, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2616478..2616489  attL    GCCGCTTTTCGC  N/A  Click
2 2620372..2621307  PHAGE_Burkho_DC1: nuclease; OCA5_c24520; phage(gi401723085)  1e-15  Click
3 2621378..2622112  PHAGE_Tetras_TJE1: hypothetical protein; OCA5_c24530; phage(gi431810886)  9e-07  Click
4 2622139..2623524  PHAGE_Burkho_BcepMigl: RecT-like protein; OCA5_c24540; phage(gi431809863)  2e-33  Click
5 2623528..2624295  PHAGE_Salmon_SSU5: putative ribonuclease H; OCA5_c24550; phage(gi410491500)  8e-36  Click
6 2624297..2624782  PHAGE_Entero_IME10: single-stranded DNA-binding protein SSB-P1; OCA5_c24560; phage(gi422934292)  5e-37  Click
7 2624782..2625207  PHAGE_Cronob_vB_CsaM_GAP31: baseplate wedge protein gp25; OCA5_c24570; phage(gi414086904)  1e-18  Click
8 2625207..2626130  PHAGE_Burkho_phiE125: hypothetical protein phiE125p37; OCA5_c24580; phage(gi17975198)  5e-86  Click
9 2626127..2626813  hypothetical protein; OCA5_c24590  N/A  Click
10 2626810..2627112  PHAGE_Mycoba_Brujita: gp60; OCA5_c24600; phage(gi206599604)  3e-17  Click
11 2627126..2627719  hypothetical protein; OCA5_c24610  N/A  Click
12 2628046..2628057  attR    GCCGCTTTTCGC  N/A  Click
13 2628280..2629494  PHAGE_Burkho_phiE125: putative site-specific integrase; OCA5_c24620; phage(gi17975195)  2e-06  Click