Definition Helicobacter bizzozeronii CIII-1, complete genome.
Accession NC_015674
Length 1,755,458
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 100 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(46304..48685)  PHAGE_Helico_1961P: JHP1044-like mosaic region protein; HBZC1_00490; phage(gi422935774)  2e-61  Click
2 complement(48810..50480)  PHAGE_Helico_1961P: JHP1044-like mosaic region protein; HBZC1_00500; phage(gi422935773)  1e-36  Click
3 complement(50534..52606)  PHAGE_Helico_1961P: JHP1044-like mosaic region protein; HBZC1_00510; phage(gi422935773)  1e-74  Click
4 complement(52930..53097)  hypothetical protein; HBZC1_00520  N/A  Click
5 complement(53294..54379)  PHAGE_Helico_phiHP33: transposase; HBZC1_00530; phage(gi371671362)  4e-135  Click
6 complement(54333..54683)  PHAGE_Helico_phiHP33: transposase; HBZC1_00540; phage(gi371671361)  2e-46  Click
7 complement(54867..56261)  PHAGE_Helico_1961P: terminsae large subunit; HBZC1_00550; phage(gi422935783)  0.0  Click
8 complement(56258..56797)  PHAGE_Helico_1961P: phage structure protein; HBZC1_00560; phage(gi422935792)  4e-07  Click
9 complement(56798..59194)  PHAGE_Lymant_MNPV: desmoplakin-like protein; HBZC1_00570; phage(gi292397752)  1e-10  Click
10 complement(59204..59953)  PHAGE_Helico_1961P: hypothetical protein; HBZC1_00580; phage(gi422935790)  1e-31  Click
11 complement(59950..60534)  PHAGE_Helico_1961P: hypothetical protein; HBZC1_00590; phage(gi422935776)  3e-32  Click
12 complement(60518..60844)  PHAGE_Helico_phiHP33: hypothetical protein; HBZC1_00600; phage(gi371671355)  2e-18  Click
13 complement(60916..61494)  PHAGE_Helico_1961P: phage structure protein; HBZC1_00610; phage(gi422935781)  2e-05  Click
14 complement(61495..61851)  PHAGE_Helico_1961P: phage structure protein; HBZC1_00620; phage(gi422935780)  6e-10  Click
15 complement(61854..63035)  PHAGE_Helico_1961P: phage structure protein; HBZC1_00630; phage(gi422935779)  3e-110  Click
16 complement(63048..63767)  PHAGE_Helico_1961P: phage structure protein; HBZC1_00640; phage(gi422935778)  5e-35  Click
17 complement(63934..64053)  hypothetical protein; HBZC1_00650  N/A  Click
18 complement(64669..64953)  PHAGE_Helico_1961P: DNA primase; HBZC1_00660; phage(gi422935771)  4e-08  Click
19 70766..70978  hypothetical protein; HBZC1_00670  N/A  Click
20 complement(71343..71936)  type II restriction enzyme HaeIII; HBZC1_00680  N/A  Click
21 complement(71926..72243)  type II restriction enzyme HaeIII; HBZC1_00690  N/A  Click
22 complement(72291..73289)  PHAGE_Thermu_26: C5 cytosine-specific DNA methylase; HBZC1_00700; phage(gi157265426)  8e-45  Click
23 complement(73371..73484)  hypothetical protein; HBZC1_00710  N/A  Click
24 complement(75525..75662)  hypothetical protein; HBZC1_00720  N/A  Click
25 complement(75750..77093)  protein C; HBZC1_00730  N/A  Click
26 complement(77646..77819)  hypothetical protein; HBZC1_00740  N/A  Click
27 78306..79604  putative mechanosensitive ion channel; HBZC1_00750  N/A  Click
28 80763..80945  hypothetical protein; HBZC1_00760  N/A  Click
29 complement(81155..81268)  hypothetical protein; HBZC1_00770  N/A  Click
30 complement(81269..81400)  hypothetical protein; HBZC1_00780  N/A  Click
31 complement(82941..83117)  hypothetical protein; HBZC1_00790  N/A  Click
32 complement(83304..83450)  hypothetical protein; HBZC1_00800  N/A  Click
33 complement(83707..83826)  hypothetical protein; HBZC1_00810  N/A  Click
34 84076..84237  hypothetical protein; HBZC1_00820  N/A  Click
35 complement(84290..85354)  hypothetical protein; HBZC1_00830  N/A  Click
36 complement(85354..86181)  hypothetical protein; HBZC1_00840  N/A  Click
37 complement(86174..86485)  hypothetical protein; HBZC1_00850  N/A  Click
38 complement(86482..87723)  hypothetical protein; HBZC1_00860  N/A  Click
39 complement(87762..87941)  hypothetical protein; HBZC1_00870  N/A  Click
40 complement(87895..89742)  hypothetical protein; HBZC1_00880  N/A  Click
41 89877..90716  PHAGE_Acanth_mimivirus: putative sel1-like repeat-containing protein; HBZC1_00890; phage(gi311977376)  1e-12  Click
42 complement(90713..91717)  PHAGE_Acanth_mimivirus: putative sel1-like repeat-containing protein; HBZC1_00900; phage(gi311977376)  2e-05  Click
43 complement(91707..92744)  PHAGE_Megavi_chiliensis: putative Sel1-like repeat-containing protein; HBZC1_00910; phage(gi363540264)  3e-17  Click
44 complement(92858..93910)  hypothetical protein; HBZC1_00920  N/A  Click
45 complement(93919..95136)  hypothetical protein; HBZC1_00930  N/A  Click
46 complement(95159..97078)  PHAGE_Mamest_A: polyhedron envelope protein calyx/pep; HBZC1_00940; phage(gi20069939)  4e-06  Click
47 97267..98418  hypothetical protein; HBZC1_00950  N/A  Click
48 complement(98405..99037)  oxygen-insensitive NAD(P)H nitroreductase; HBZC1_00960  N/A  Click
49 complement(99099..99518)  hypothetical protein; HBZC1_00970  N/A  Click
50 complement(99502..100194)  PHAGE_Camelp_virus: CMLV006; HBZC1_00980; phage(gi18640240)  5e-18  Click
51 100320..101042  NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; HBZC1_00990  N/A  Click
52 101035..101307  NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; HBZC1_01000  N/A  Click
53 complement(101304..102659)  putative dihydrolipoamide dehydrogenase; HBZC1_01010  N/A  Click
54 complement(102750..103121)  hypothetical protein; HBZC1_01020  N/A  Click
55 complement(103168..104394)  hypothetical protein; HBZC1_01030  N/A  Click
56 104468..104695  hypothetical protein; HBZC1_01040  N/A  Click
57 complement(104697..104978)  hypothetical protein; HBZC1_01050  N/A  Click
58 complement(105013..105549)  hypothetical protein; HBZC1_01060  N/A  Click
59 complement(105556..106932)  multi antimicrobial extrusion protein; HBZC1_01070  N/A  Click
60 complement(106951..107340)  30S ribosomal protein S9p (S16e); HBZC1_01080  N/A  Click
61 complement(107341..107769)  50S ribosomal protein L13p (L13Ae); HBZC1_01090  N/A  Click
62 complement(107846..108337)  hypothetical protein; HBZC1_01100  N/A  Click
63 108444..108857  flagellar assembly factor FliW; HBZC1_01110  N/A  Click
64 108861..109928  UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; HBZC1_01120  N/A  Click
65 complement(109925..110200)  hypothetical protein; HBZC1_01130  N/A  Click
66 complement(110200..110349)  hypothetical protein; HBZC1_01140  N/A  Click
67 110354..110509  hypothetical protein; HBZC1_01150  N/A  Click
68 complement(110573..112690)  PHAGE_Strept_PH15: putative minor tail protein; HBZC1_01160; phage(gi190151462)  2e-05  Click
69 complement(112845..113840)  hypothetical protein; HBZC1_01170  N/A  Click
70 complement(113898..114506)  outer membrane protein P1; HBZC1_01180  N/A  Click
71 complement(114466..115623)  outer membrane protein P1; HBZC1_01190  N/A  Click
72 complement(115633..116247)  hypothetical protein; HBZC1_01200  N/A  Click
73 complement(116267..116953)  putative lipoprotein required for motility; HBZC1_01210  N/A  Click
74 117132..117878  PHAGE_Equid__2: uracil DNA glycosylase; HBZC1_01220; phage(gi9628049)  5e-33  Click
75 complement(117864..118508)  hypothetical protein; HBZC1_01230  N/A  Click
76 complement(118477..118974)  hypothetical protein; HBZC1_01240  N/A  Click
77 complement(119036..119557)  membrane-associated lipoprotein (lpp20); HBZC1_01250  N/A  Click
78 complement(119598..119855)  30S ribosomal protein S18p; HBZC1_01260  N/A  Click
79 complement(119882..120004)  hypothetical protein; HBZC1_01270  N/A  Click
80 complement(119964..120335)  PHAGE_Pseudo_F116: single-stranded DNA-binding protein; HBZC1_01280; phage(gi56692915)  4e-19  Click
81 complement(120328..120741)  30S ribosomal protein S6p; HBZC1_01290  N/A  Click
82 complement(120802..121758)  hypothetical protein; HBZC1_01300  N/A  Click
83 complement(121797..122330)  PHAGE_Human__8: LANA; HBZC1_01310; phage(gi139472804)  8e-06  Click
84 complement(122372..122719)  [NiFe] hydrogenase nickel incorporation protein HypA; HBZC1_01320  N/A  Click
85 complement(122728..124884)  flagellar hook protein FlgE; HBZC1_01330  N/A  Click
86 complement(124910..125257)  PHAGE_Helico_1961P: terminase small subunit; HBZC1_01340; phage(gi422935795)  1e-15  Click
87 complement(125267..125398)  hypothetical protein; HBZC1_01350  N/A  Click
88 complement(125382..126017)  PHAGE_Cyprin_2: membrane protein ORF25D; HBZC1_01360; phage(gi422933804)  9e-10  Click
89 complement(126164..126301)  hypothetical protein; HBZC1_01370  N/A  Click
90 complement(126669..128438)  PHAGE_Helico_1961P: putative phage portal protein; HBZC1_01380; phage(gi422935782)  0.0  Click
91 complement(128500..128619)  hypothetical protein; HBZC1_01390  N/A  Click
92 complement(128623..128838)  PHAGE_Helico_1961P: hypothetical protein; HBZC1_01400; phage(gi422935788)  1e-14  Click
93 complement(128835..129578)  PHAGE_Bordet_1: adenine DNA methyltransferase; HBZC1_01410; phage(gi41179391)  4e-51  Click
94 complement(129578..130738)  hypothetical protein; HBZC1_01420  N/A  Click
95 complement(131047..131181)  hypothetical protein; HBZC1_01430  N/A  Click
96 complement(131200..131325)  hypothetical protein; HBZC1_01440  N/A  Click
97 complement(131327..132391)  PHAGE_Synech_S_SKS1: GDP-L-fucose synthase; HBZC1_01450; phage(gi472340899)  6e-86  Click
98 complement(132465..132938)  PHAGE_Acanth_mimivirus: probable methylated-DNA--protein-cysteine methyltransferase; HBZC1_01460; phage(gi311978100)  3e-23  Click
99 complement(132935..134311)  (S)-2-hydroxy-acid oxidase; HBZC1_01470  N/A  Click
100 complement(134321..135424)  PHAGE_Bacill_phiAGATE: hypothetical protein; HBZC1_01480; phage(gi448260843)  5e-11  Click
Region 2, total : 58 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1613405..1613430  attL    ACTTTAGTTATGGGAGAGTATGTCAA  N/A  Click
2 1613405..1613430  attL    ACTTTAGTTATGGGAGAGTATGTCAA  N/A  Click
3 1625746..1626150  PHAGE_Microc_LMM01: putative site-specific integrase-resolvase; HBZC1_17420; phage(gi117530307)  4e-39  Click
4 1626410..1627438  PHAGE_Clostr_st: putative IS transposase (OrfB); HBZC1_17430; phage(gi80159731)  4e-41  Click
5 1627562..1628818  hypothetical protein; HBZC1_17440  N/A  Click
6 complement(1628871..1629254)  hypothetical protein; HBZC1_17450  N/A  Click
7 complement(1629254..1630183)  PROPHAGE_Xylell_Temecula1: phage-related tail protein; HBZC1_17460; phage(gi28198980)  1e-12  Click
8 complement(1630184..1630414)  hypothetical protein; HBZC1_17470  N/A  Click
9 complement(1630407..1630946)  hypothetical protein; HBZC1_17480  N/A  Click
10 complement(1630949..1632859)  PHAGE_Salmon_RE_2010: tail tape measure protein; HBZC1_17490; phage(gi418489724)  1e-20  Click
11 complement(1632825..1633499)  PHAGE_Vibrio_VP882: phage-related tail protein; HBZC1_17500; phage(gi126010872)  8e-15  Click
12 complement(1633484..1633699)  hypothetical protein; HBZC1_17510  N/A  Click
13 complement(1633993..1634109)  hypothetical protein; HBZC1_17520  N/A  Click
14 complement(1634115..1634387)  hypothetical protein; HBZC1_17530  N/A  Click
15 complement(1634397..1634828)  hypothetical protein; HBZC1_17540  N/A  Click
16 complement(1634911..1635765)  PHAGE_Vibrio_vB_VpaM_MAR: tail sheath protein; HBZC1_17550; phage(gi428782746)  2e-11  Click
17 complement(1635756..1636034)  hypothetical protein; HBZC1_17560  N/A  Click
18 complement(1636009..1636377)  PHAGE_Helico_KHP30: hypothetical protein; HBZC1_17570; phage(gi431810563)  2e-05  Click
19 complement(1636464..1636943)  hypothetical protein; HBZC1_17580  N/A  Click
20 complement(1636936..1637193)  hypothetical protein; HBZC1_17590  N/A  Click
21 complement(1637190..1637528)  PHAGE_Helico_KHP30: putative holin; HBZC1_17600; phage(gi431810561)  4e-24  Click
22 complement(1637760..1638014)  hypothetical protein; HBZC1_17610  N/A  Click
23 complement(1638014..1638430)  PHAGE_Erwini_vB_EamP_L1: lysozyme; HBZC1_17620; phage(gi422935539)  8e-32  Click
24 complement(1638417..1638842)  PHAGE_Pseudo_Lu11: putative tail assembly protein; HBZC1_17630; phage(gi388684690)  3e-06  Click
25 complement(1638835..1639401)  PHAGE_Helico_phiHP33: putative tail fiber; HBZC1_17640; phage(gi371671354)  1e-22  Click
26 complement(1639410..1640630)  hypothetical protein; HBZC1_17650  N/A  Click
27 complement(1640627..1641178)  hypothetical protein; HBZC1_17660  N/A  Click
28 complement(1641175..1642218)  PHAGE_Pseudo_phiCTX: predicted baseplate or base of tail fiber; HBZC1_17670; phage(gi17313237)  6e-05  Click
29 complement(1642215..1642490)  hypothetical protein; HBZC1_17680  N/A  Click
30 complement(1642492..1642881)  hypothetical protein; HBZC1_17690  N/A  Click
31 complement(1642875..1643165)  hypothetical protein; HBZC1_17700  N/A  Click
32 complement(1643156..1644022)  PHAGE_Stenot_S1: putative methylase; HBZC1_17710; phage(gi213163922)  4e-07  Click
33 complement(1644019..1644243)  hypothetical protein; HBZC1_17720  N/A  Click
34 complement(1644247..1644453)  PHAGE_Atelin_3: orf 48; HBZC1_17730; phage(gi9631239)  1e-11  Click
35 complement(1644559..1644729)  hypothetical protein; HBZC1_17740  N/A  Click
36 complement(1644733..1646454)  PHAGE_Synech_S_CBS3: major capsid protein; HBZC1_17750; phage(gi331028011)  3e-19  Click
37 complement(1646597..1647886)  hypothetical protein; HBZC1_17760  N/A  Click
38 1648003..1648314  PHAGE_Clostr_CD119: methyltransferase; HBZC1_17770; phage(gi90592706)  2e-10  Click
39 1648470..1648495  attR    ACTTTAGTTATGGGAGAGTATGTCAA  N/A  Click
40 1648549..1648992  PHAGE_Clostr_phiSM101: putative modification methylase dpniia; HBZC1_17780; phage(gi110804053)  1e-17  Click
41 complement(1648989..1650830)  PHAGE_Helico_KHP30: putative primase; HBZC1_17790; phage(gi431810549)  3e-46  Click
42 1650921..1651043  hypothetical protein; HBZC1_17800  N/A  Click
43 1651438..1651569  hypothetical protein; HBZC1_17810  N/A  Click
44 1651607..1651900  PHAGE_Burkho_2: gp7, putative addiction module killer protein; HBZC1_17820; phage(gi134288691)  1e-14  Click
45 1651902..1652144  hypothetical protein; HBZC1_17830  N/A  Click
46 complement(1652195..1652362)  hypothetical protein; HBZC1_17840  N/A  Click
47 1652505..1652627  hypothetical protein; HBZC1_17850  N/A  Click
48 complement(1652672..1654036)  PHAGE_Halomo_1: portal protein; HBZC1_17860; phage(gi167832349)  1e-30  Click
49 complement(1654046..1654489)  hypothetical protein; HBZC1_17870  N/A  Click
50 complement(1654476..1656287)  PHAGE_Synech_S_CBS3: large terminase subunit; HBZC1_17880; phage(gi331028008)  3e-56  Click
51 complement(1656274..1657440)  hypothetical protein; HBZC1_17890  N/A  Click
52 complement(1657437..1658012)  hypothetical protein; HBZC1_17900  N/A  Click
53 complement(1658098..1658226)  hypothetical protein; HBZC1_17910  N/A  Click
54 1658298..1658465  hypothetical protein; HBZC1_17920  N/A  Click
55 complement(1658616..1659737)  PHAGE_Staphy_26: phage repressor protein; HBZC1_17930; phage(gi304443270)  7e-07  Click
56 1659892..1660107  hypothetical protein; HBZC1_17940  N/A  Click
57 1660097..1660348  hypothetical protein; HBZC1_17950  N/A  Click
58 1660670..1661848  PHAGE_Staphy_71: ORF009; HBZC1_17960; phage(gi66396049)  2e-29  Click
59 complement(1661870..1662046)  hypothetical protein; HBZC1_17970  N/A  Click
60 complement(1662057..1662278)  PHAGE_Yersin_phiR1_37: hypothetical protein; HBZC1_17980; phage(gi358356767)  6e-05  Click
61 complement(1662316..1663377)  PHAGE_Aeromo_phiO18P: putative integrase; HBZC1_17990; phage(gi148727179)  7e-12  Click
62 1669708..1669733  attR    ACTTTAGTTATGGGAGAGTATGTCAA  N/A  Click