Definition Lacinutrix sp. 5H-3-7-4 chromosome, complete genome.
Accession NC_015638
Length 3,296,168
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2050802..2050815  attL    CATATAACAAAGAA  N/A  Click
2 2051100..2051990  PHAGE_Entero_P2: Int; Lacal_1817; phage(gi9630357)  4e-11  Click
3 2052025..2052327  sigma-54 modulation protein; Lacal_1818  N/A  Click
4 2052429..2052502  tRNA  N/A  Click
5 2052570..2052651  tRNA  N/A  Click
6 2052702..2052777  tRNA  N/A  Click
7 2052784..2052858  tRNA  N/A  Click
8 2052923..2054110  PHAGE_Cafete_BV_PW1: putative eIF-2gamma; Lacal_1819; phage(gi310831469)  6e-21  Click
9 2054176..2054248  tRNA  N/A  Click
10 2054333..2054530  preprotein translocase subunit SecE; Lacal_1820  N/A  Click
11 2054538..2055092  PHAGE_Synech_S_CRM01: NusG antitermination factor; Lacal_1821; phage(gi333798264)  2e-13  Click
12 2055165..2055605  50S ribosomal protein L11; Lacal_1822  N/A  Click
13 2055626..2056315  50S ribosomal protein L1; Lacal_1823  N/A  Click
14 2056336..2056857  50S ribosomal protein L10; Lacal_1824  N/A  Click
15 2056911..2057285  50S ribosomal protein L7/L12; Lacal_1825  N/A  Click
16 2057410..2061222  PHAGE_Cafete_BV_PW1: putative DNA-directed RNA polymerase subunit Rpb2 precursor; Lacal_1826; phage(gi310831213)  8e-44  Click
17 2061294..2065595  PHAGE_Wisean_virus: hypothetical protein; Lacal_1827; phage(gi339906153)  2e-44  Click
18 2065670..2065990  PHAGE_Staphy_42E: ORF048; Lacal_1828; phage(gi66395554)  2e-06  Click
19 complement(2066212..2067867)  PHAGE_Marseillevirus: translation elongation factor EF-1alpha; Lacal_1829; phage(gi284504191)  2e-08  Click
20 2068228..2074653  PHAGE_Cyanop_P_RSM6: hypothetical protein; Lacal_1830; phage(gi472341641)  3e-34  Click
21 2074650..2076521  PHAGE_Cyanop_P_RSM6: hypothetical protein; Lacal_1831; phage(gi472341641)  9e-19  Click
22 2076541..2077812  PHAGE_Cyanop_P_RSM6: hypothetical protein; Lacal_1832; phage(gi472341641)  3e-12  Click
23 2084659..2084672  attR    CATATAACAAAGAA  N/A  Click
Region 2, total : 6 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2126679..2127587)  PHAGE_Agroba_7_7_1: hypothetical protein; Lacal_1878; phage(gi435844368)  5e-09  Click
2 complement(2127590..2128354)  PHAGE_Entero_EF62phi: chromosome partitioning ATPase; Lacal_1879; phage(gi384519759)  1e-18  Click
3 complement(2128511..2131360)  PHAGE_Acanth_moumouvirus: putative Zn-dependent peptidase; Lacal_1880; phage(gi441432193)  2e-21  Click
4 2131571..2133022  Spore coat protein CotH; Lacal_1881  N/A  Click
5 complement(2133023..2134228)  PHAGE_Cafete_BV_PW1: putative phosphoesterase; Lacal_1882; phage(gi310831303)  2e-18  Click
6 complement(2134277..2134915)  PHAGE_Acanth_moumouvirus: putative transposase; Lacal_1883; phage(gi441432213)  3e-05  Click