Definition Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete sequence.
Accession NC_015593
Length 3,080,818
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1576125..1576138  attL    CGCGCAAAGCCCGC  N/A  Click
2 1590233..1591549  PHAGE_Psychr_pOW20_A: DNA methylase; Sphch_1474; phage(gi472339820)  8e-51  Click
3 1591542..1592015  hypothetical protein; Sphch_1475  N/A  Click
4 1592005..1593471  PHAGE_Aggreg_S1249: putative terminase large subunit TerL; Sphch_1476; phage(gi273809570)  2e-59  Click
5 complement(1593536..1594381)  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; Sphch_1477; phage(gi24112460)  1e-75  Click
6 complement(1594378..1594785)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; Sphch_1478; phage(gi17546153)  1e-32  Click
7 complement(1594821..1595570)  PHAGE_Prochl_P_GSP1: hypothetical protein; Sphch_1479; phage(gi472343493)  1e-08  Click
8 complement(1595663..1596526)  PHAGE_Prochl_P_GSP1: hypothetical protein; Sphch_1480; phage(gi472343493)  1e-05  Click
9 complement(1596895..1597803)  PHAGE_Acinet_133: probably gp37-like tail fiber protein; Sphch_1481; phage(gi326536388)  5e-08  Click
10 1599247..1599260  attR    CGCGCAAAGCCCGC  N/A  Click
Region 2, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2717356..2717520)  PROPHAGE_Escher_Sakai: putative integrase; Sphch_2555; phage(gi15834507)  9e-11  Click
2 complement(2717704..2717794)  tRNA  N/A  Click
3 2717993..2719108  alanine dehydrogenase; Sphch_2556  N/A  Click
4 2719445..2720446  PHAGE_Acanth_moumouvirus: NAD-dependent epimerase/dehydratase; Sphch_2557; phage(gi441432391)  7e-27  Click
5 2720745..2721752  PHAGE_Acinet_Acj61: hypothetical protein; Sphch_2558; phage(gi311992834)  6e-23  Click
6 2721835..2722641  PHAGE_Pseudo_virus: NTP pyrophosphohydrolase; Sphch_2559; phage(gi289183835)  1e-04  Click
7 2722678..2723268  phosphoglycerate mutase; Sphch_2560  N/A  Click
8 complement(2723270..2723821)  OstA family protein; Sphch_2561  N/A  Click
9 complement(2723821..2724468)  hypothetical protein; Sphch_2562  N/A  Click
10 complement(2724477..2725094)  PHAGE_Thermu_TMA: DNA polymerase; Sphch_2563; phage(gi343960414)  1e-06  Click
11 2725338..2726165  PHAGE_Ectoca_1: EsV-1-144; Sphch_2564; phage(gi13242615)  1e-18  Click
12 2726322..2727164  PHAGE_Tetras_SI1: type II DNA modification methyltransferase; Sphch_2565; phage(gi472342268)  8e-27  Click
13 complement(2727166..2727804)  Restriction endonuclease BglII; Sphch_2566  N/A  Click
14 complement(2727978..2729381)  PHAGE_Lactoc_phiLC3: phage repressor; Sphch_2567; phage(gi45597387)  9e-05  Click
15 2729505..2729672  hypothetical protein; Sphch_2568  N/A  Click
16 complement(2729733..2730734)  PHAGE_Emilia_86: putative phosphate permease; Sphch_2569; phage(gi73852587)  3e-20  Click
17 complement(2730747..2731862)  PHAGE_Pseudo_Lu11: putative NUDIX hydrolase; Sphch_2570; phage(gi388684918)  3e-08  Click
18 complement(2731968..2734082)  TonB-dependent receptor; Sphch_2571  N/A  Click
19 complement(2734211..2735137)  LysR family transcriptional regulator; Sphch_2572  N/A  Click
20 2735247..2735320  tRNA  N/A  Click
21 complement(2735442..2735990)  hypothetical protein; Sphch_2573  N/A  Click
22 complement(2735974..2736348)  hypothetical protein; Sphch_2574  N/A  Click
23 complement(2736409..2736987)  PHAGE_Caulob_CcrRogue: putative tyrosine recombinase; Sphch_2575; phage(gi414089001)  1e-27  Click