Definition | Delftia sp. Cs1-4 chromosome, complete genome. |
---|---|
Accession | NC_015563 |
Length | 6,685,842 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 42 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3010917..3010934 | attL GTGCTGGCCGAGGCCCGC | N/A | Click |
2 | 3023429..3024712 | PHAGE_Burkho_KS9: integrase gp31; DelCs14_2650; phage(gi255033714) | 1e-79 | Click |
3 | complement(3024709..3025020) | PHAGE_Burkho_KS9: transcriptional regulator gp34; DelCs14_2651; phage(gi255033717) | 6e-12 | Click |
4 | complement(3025017..3025154) | hypothetical protein; DelCs14_2652 | N/A | Click |
5 | 3025341..3026276 | PHAGE_Salmon_7_11: hypothetical protein; DelCs14_2653; phage(gi345461254) | 4e-06 | Click |
6 | complement(3026296..3027690) | PHAGE_Mycoba_Porky: gp98; DelCs14_2654; phage(gi194303394) | 5e-91 | Click |
7 | complement(3027836..3028237) | BLUF domain-containing protein; DelCs14_2655 | N/A | Click |
8 | complement(3028479..3028772) | histone family protein nucleoid-structuring protein H-NS; DelCs14_2656 | N/A | Click |
9 | complement(3028826..3029524) | hypothetical protein; DelCs14_2657 | N/A | Click |
10 | complement(3029514..3029744) | hypothetical protein; DelCs14_2658 | N/A | Click |
11 | complement(3029741..3030802) | PHAGE_Entero_epsilon15: RecT; DelCs14_2659; phage(gi30387413) | 3e-62 | Click |
12 | complement(3030799..3031608) | PHAGE_Xantho_CP2: hypothetical protein; DelCs14_2660; phage(gi448245207) | 4e-13 | Click |
13 | complement(3031688..3031870) | hypothetical protein; DelCs14_2661 | N/A | Click |
14 | complement(3031858..3032121) | hypothetical protein; DelCs14_2662 | N/A | Click |
15 | complement(3032125..3032391) | hypothetical protein; DelCs14_2663 | N/A | Click |
16 | complement(3032381..3032722) | hypothetical protein; DelCs14_2664 | N/A | Click |
17 | complement(3032953..3033249) | PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p32; DelCs14_2665; phage(gi109289967) | 2e-07 | Click |
18 | complement(3033521..3033739) | hypothetical protein; DelCs14_2666 | N/A | Click |
19 | complement(3034077..3034460) | hypothetical protein; DelCs14_2667 | N/A | Click |
20 | complement(3034479..3035135) | PHAGE_Entero_HK446: prophage repressor; DelCs14_2668; phage(gi428782233) | 8e-31 | Click |
21 | complement(3035574..3035786) | hypothetical protein; DelCs14_2669 | N/A | Click |
22 | 3035981..3036508 | hypothetical protein; DelCs14_2670 | N/A | Click |
23 | 3036501..3036653 | hypothetical protein; DelCs14_2671 | N/A | Click |
24 | 3036650..3036967 | hypothetical protein; DelCs14_2672 | N/A | Click |
25 | 3036960..3037856 | PHAGE_Acinet_Bphi_B1251: hypothetical protein; DelCs14_2673; phage(gi423261989) | 9e-18 | Click |
26 | 3037853..3039247 | PHAGE_Burkho_KS9: helicase gp45; DelCs14_2674; phage(gi255033728) | 3e-58 | Click |
27 | 3039259..3039723 | PHAGE_Pseudo_phi297: holliday junction resolvase; DelCs14_2675; phage(gi374531280) | 2e-41 | Click |
28 | 3039720..3040178 | PHAGE_Aggreg_S1249: putative recombination protein NinB; DelCs14_2676; phage(gi273809585) | 4e-06 | Click |
29 | 3040175..3040630 | hypothetical protein; DelCs14_2677 | N/A | Click |
30 | 3040702..3041223 | PHAGE_Pseudo_F116: hypothetical protein F116p37; DelCs14_2678; phage(gi56692953) | 5e-12 | Click |
31 | complement(3041282..3042118) | PHAGE_Entero_mEp390: hypothetical protein; DelCs14_2679; phage(gi428782711) | 1e-47 | Click |
32 | 3042231..3042932 | PHAGE_Escher_HK639: terminase small subunit; DelCs14_2680; phage(gi356870601) | 1e-40 | Click |
33 | 3042929..3044233 | PHAGE_Bdello_phi1422: putative TerL large-subunit terminase; DelCs14_2681; phage(gi422936857) | 7e-58 | Click |
34 | 3044235..3046442 | PHAGE_Escher_vB_EcoP_G7C: portal protein; DelCs14_2682; phage(gi345461893) | 1e-08 | Click |
35 | 3046493..3046711 | hypothetical protein; DelCs14_2683 | N/A | Click |
36 | 3046743..3047702 | PHAGE_Bovine_1: large tegument protein; DelCs14_2684; phage(gi124246481) | 1e-08 | Click |
37 | 3047721..3048761 | PHAGE_Pseudo_pYD6_A: major coat protein; DelCs14_2685; phage(gi472340770) | 5e-16 | Click |
38 | 3048856..3049311 | hypothetical protein; DelCs14_2686 | N/A | Click |
39 | 3049291..3049308 | attR GTGCTGGCCGAGGCCCGC | N/A | Click |
40 | 3049331..3050008 | PHAGE_Pseudo_F116: hypothetical protein F116p46; DelCs14_2687; phage(gi56692957) | 3e-13 | Click |
41 | complement(3050080..3050355) | hypothetical protein; DelCs14_2688 | N/A | Click |
42 | 3051023..3052360 | PHAGE_Pseudo_F116: hypothetical protein F116p58; DelCs14_2689; phage(gi56692969) | 1e-08 | Click |
43 | complement(3052366..3052659) | hypothetical protein; DelCs14_2690 | N/A | Click |
44 | complement(3052712..3053326) | phage membrane protein; DelCs14_2691 | N/A | Click |
Region 2, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4414854..4418348 | PHAGE_Acanth_moumouvirus: DEAD/SNF2-like helicase; DelCs14_3899; phage(gi441432286) | 5e-05 | Click |
2 | 4418366..4419031 | hypothetical protein; DelCs14_3900 | N/A | Click |
3 | 4419111..4419824 | phosphoserine phosphatase SerB; DelCs14_3901 | N/A | Click |
4 | complement(4419933..4420547) | PHAGE_Ralsto_RSM3: hypothetical protein RSM3_gp14; DelCs14_3902; phage(gi209901327) | 7e-36 | Click |
5 | complement(4420624..4421259) | hypothetical protein; DelCs14_3903 | N/A | Click |
6 | complement(4421334..4422698) | PHAGE_Vibrio_Vf33: Vpf380; DelCs14_3904; phage(gi49248527) | 2e-48 | Click |
7 | complement(4422695..4423084) | PHAGE_Vibrio_Vf33: Vpf104; DelCs14_3905; phage(gi49248526) | 3e-10 | Click |
8 | complement(4423086..4424456) | PHAGE_Human__2: EBNA-1; DelCs14_3906; phage(gi139424506) | 6e-25 | Click |
9 | complement(4424706..4424939) | PHAGE_Vibrio_Vf33: Vpf77; DelCs14_3907; phage(gi49248524) | 1e-06 | Click |
10 | complement(4425013..4425228) | hypothetical protein; DelCs14_3908 | N/A | Click |
11 | complement(4425228..4425368) | hypothetical protein; DelCs14_3909 | N/A | Click |
12 | complement(4425580..4425990) | PHAGE_Ralsto_PE226: hypothetical protein; DelCs14_3910; phage(gi327198629) | 2e-07 | Click |
13 | complement(4425974..4427056) | PHAGE_Entero_2: gene II product; DelCs14_3911; phage(gi9625383) | 8e-24 | Click |
14 | complement(4427173..4427409) | hypothetical protein; DelCs14_3912 | N/A | Click |
15 | complement(4427502..4427753) | hypothetical protein; DelCs14_3913 | N/A | Click |
16 | 4428483..4429061 | PHAGE_Macaci_1: large tegument protein; DelCs14_3914; phage(gi30984464) | 2e-16 | Click |
Region 3, total : 29 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(4568202..4570685) | PHAGE_Burkho_BcepIL02: DarB-like antirestriction protein; DelCs14_4045; phage(gi238801686) | 3e-11 | Click |
2 | complement(4570814..4571854) | hypothetical protein; DelCs14_4046 | N/A | Click |
3 | complement(4571845..4572582) | PHAGE_Burkho_BcepIL02: PAPS reductase-like protein; DelCs14_4047; phage(gi238801683) | 2e-39 | Click |
4 | complement(4572582..4573451) | PHAGE_Burkho_BcepIL02: virion-associated phage protein; DelCs14_4048; phage(gi238801682) | 2e-20 | Click |
5 | complement(4573429..4573869) | hypothetical protein; DelCs14_4049 | N/A | Click |
6 | complement(4573869..4574189) | PHAGE_Synech_S_SKS1: hypothetical protein; DelCs14_4050; phage(gi472340851) | 1e-05 | Click |
7 | complement(4574285..4576213) | PHAGE_Escher_HK639: host specificity protein; DelCs14_4051; phage(gi356870623) | 4e-06 | Click |
8 | complement(4576210..4578789) | PHAGE_Burkho_BcepIL02: virion-associated phage protein; DelCs14_4052; phage(gi238801679) | 5e-44 | Click |
9 | complement(4578820..4579284) | hypothetical protein; DelCs14_4053 | N/A | Click |
10 | complement(4579281..4581119) | PHAGE_Burkho_BcepIL02: putative tail fiber protein; DelCs14_4054; phage(gi238801677) | 2e-08 | Click |
11 | complement(4581122..4582168) | PHAGE_Burkho_BcepIL02: virion-associated phage protein; DelCs14_4055; phage(gi238801673) | 2e-08 | Click |
12 | complement(4582172..4582588) | PHAGE_Burkho_BcepIL02: virion-associated phage protein; DelCs14_4056; phage(gi238801671) | 4e-08 | Click |
13 | complement(4582658..4583290) | PHAGE_Burkho_BcepIL02: virion-associated phage protein; DelCs14_4057; phage(gi238801669) | 6e-25 | Click |
14 | complement(4583281..4583877) | hypothetical protein; DelCs14_4058 | N/A | Click |
15 | complement(4583906..4584289) | hypothetical protein; DelCs14_4059 | N/A | Click |
16 | complement(4584377..4584826) | hypothetical protein; DelCs14_4060 | N/A | Click |
17 | complement(4584853..4585968) | PHAGE_Burkho_BcepIL02: major capsid protein; DelCs14_4061; phage(gi238801666) | 6e-86 | Click |
18 | complement(4586029..4586235) | PHAGE_Pseudo_F116: hypothetical protein F116p47; DelCs14_4062; phage(gi56692958) | 9e-05 | Click |
19 | complement(4586244..4587173) | PHAGE_Burkho_BcepIL02: hypothetical protein BcepIL02_gp47; DelCs14_4063; phage(gi238801663) | 2e-16 | Click |
20 | complement(4587717..4588364) | PHAGE_Salmon_SE1: Gp19; DelCs14_4064; phage(gi219681236) | 1e-11 | Click |
21 | complement(4588435..4588758) | hypothetical protein; DelCs14_4065 | N/A | Click |
22 | complement(4588748..4591087) | PHAGE_Burkho_BcepIL02: phage portal protein; DelCs14_4066; phage(gi238801662) | 1e-140 | Click |
23 | complement(4591074..4591496) | PHAGE_Burkho_BcepIL02: hypothetical protein BcepIL02_gp45; DelCs14_4067; phage(gi238801661) | 2e-05 | Click |
24 | complement(4591526..4592881) | PHAGE_Bdello_phi1422: putative TerL large-subunit terminase; DelCs14_4068; phage(gi422936857) | 2e-53 | Click |
25 | complement(4592878..4593654) | PHAGE_Burkho_BcepIL02: TerS; DelCs14_4069; phage(gi238801644) | 3e-31 | Click |
26 | complement(4593668..4594033) | hypothetical protein; DelCs14_4070 | N/A | Click |
27 | complement(4594313..4594840) | hypothetical protein; DelCs14_4071 | N/A | Click |
28 | complement(4594843..4595814) | PHAGE_Pseudo_phi297: putative DNA replication protein O; DelCs14_4072; phage(gi374531278) | 3e-33 | Click |
29 | 4596143..4596862 | PHAGE_Cronob_ENT47670: putative transcriptional regulator; DelCs14_4073; phage(gi431810510) | 6e-13 | Click |
Region 4, total : 47 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4943027..4943041 | attL CGCAGCTGCCGCCAG | N/A | Click |
2 | complement(4943687..4944784) | PHAGE_Burkho_phiE202: gp5, phage portal protein, pbsx family; DelCs14_4366; phage(gi134288763) | 1e-110 | Click |
3 | complement(4944781..4946748) | PHAGE_Burkho_phiE202: gp4, phage terminase, ATPase subunit; DelCs14_4367; phage(gi134288784) | 0.0 | Click |
4 | 4946852..4947637 | PHAGE_Burkho_phiE202: gp3, phage capsid scaffolding protein (GPO); DelCs14_4368; phage(gi134288755) | 2e-44 | Click |
5 | 4947677..4948699 | PHAGE_Burkho_phiE202: gp2, phage major capsid protein, P2 family; DelCs14_4369; phage(gi134288740) | 3e-107 | Click |
6 | 4948754..4949458 | PHAGE_Burkho_phiE202: gp1, phage terminase, endonuclease subunit; DelCs14_4370; phage(gi134288748) | 4e-39 | Click |
7 | 4949575..4950054 | PHAGE_Burkho_phiE202: gp48, phage head completion protein (GPL); DelCs14_4371; phage(gi134288751) | 4e-23 | Click |
8 | 4950056..4950286 | PHAGE_Burkho_phiE202: gp46, phage Tail Protein X; DelCs14_4372; phage(gi134288782) | 3e-07 | Click |
9 | 4950302..4950541 | PHAGE_Burkho_phiE125: putative class II holin; DelCs14_4373; phage(gi17975185) | 2e-06 | Click |
10 | 4950538..4951068 | PHAGE_Iodoba_phiPLPE: gp15 putative lysozyme; DelCs14_4374; phage(gi197085629) | 9e-20 | Click |
11 | 4951065..4951646 | PHAGE_Burkho_Bcep176: gp56; DelCs14_4375; phage(gi77864681) | 1e-12 | Click |
12 | 4951630..4952145 | PHAGE_Pseudo_phiCTX: predicted tail completion; DelCs14_4376; phage(gi17313232) | 5e-27 | Click |
13 | 4952148..4952621 | PROPHAGE_Salmon_Ty2: putative phage tail protein; DelCs14_4377; phage(gi29143749) | 2e-29 | Click |
14 | 4952691..4953245 | PHAGE_Pseudo_phiCTX: predicted baseplate; DelCs14_4378; phage(gi17313235) | 9e-16 | Click |
15 | 4953242..4953604 | PHAGE_Burkho_phiE202: gp35, phage baseplate assembly protein; DelCs14_4379; phage(gi134288768) | 3e-19 | Click |
16 | 4953601..4954440 | PHAGE_Mannhe_phiMHaA1: baseplate assembly protein J; DelCs14_4380; phage(gi109289956) | 6e-31 | Click |
17 | 4954440..4955387 | hypothetical protein; DelCs14_4381 | N/A | Click |
18 | 4955391..4955879 | hypothetical protein; DelCs14_4382 | N/A | Click |
19 | 4955887..4958040 | PHAGE_Entero_phiEF24C: putative adsorption associated tail protein; DelCs14_4383; phage(gi158079337) | 1e-39 | Click |
20 | 4958030..4959064 | PHAGE_Bacill_phiAGATE: hypothetical protein; DelCs14_4384; phage(gi448261019) | 1e-05 | Click |
21 | 4959073..4959777 | hypothetical protein; DelCs14_4385 | N/A | Click |
22 | 4959843..4960697 | PHAGE_Human__2: EBNA-1; DelCs14_4386; phage(gi139424506) | 2e-31 | Click |
23 | 4960699..4961124 | hypothetical protein; DelCs14_4387 | N/A | Click |
24 | 4961295..4962491 | PHAGE_Erwini_ENT90: tail sheath protein; DelCs14_4388; phage(gi431810939) | 1e-125 | Click |
25 | 4962507..4963016 | PHAGE_Ralsto_phiRSA1: putative tail tube protein gpFII; DelCs14_4389; phage(gi145708102) | 5e-35 | Click |
26 | 4963102..4963452 | PHAGE_Entero_PsP3: gp23; DelCs14_4390; phage(gi41057375) | 1e-16 | Click |
27 | 4963461..4963592 | PHAGE_Yersin_413C: gpE+E'; DelCs14_4391; phage(gi30065728) | 6e-07 | Click |
28 | 4963608..4966271 | PHAGE_Burkho_phiE202: gp26, bacteriophage membrane protein; DelCs14_4392; phage(gi134288775) | 1e-145 | Click |
29 | 4966283..4966741 | PHAGE_Burkho_phiE202: gp25, fels-2 prophage protein; DelCs14_4393; phage(gi134288777) | 2e-33 | Click |
30 | 4966751..4967803 | PHAGE_Burkho_phiE202: gp24, fels-2 prophage protein; DelCs14_4394; phage(gi134288767) | 8e-82 | Click |
31 | 4968310..4968966 | PHAGE_Entero_P4: hypothetical protein P4p03; DelCs14_4395; phage(gi9627510) | 3e-25 | Click |
32 | complement(4968970..4970052) | PHAGE_Entero_P4: hypothetical protein P4p02; DelCs14_4396; phage(gi9627509) | 4e-77 | Click |
33 | complement(4970058..4970429) | hypothetical protein; DelCs14_4397 | N/A | Click |
34 | complement(4970477..4971433) | hypothetical protein; DelCs14_4398 | N/A | Click |
35 | complement(4971466..4972185) | PHAGE_Burkho_phiE202: gp21; DelCs14_4399; phage(gi134288765) | 2e-17 | Click |
36 | complement(4972554..4972766) | hypothetical protein; DelCs14_4400 | N/A | Click |
37 | 4972803..4973009 | hypothetical protein; DelCs14_4401 | N/A | Click |
38 | 4973120..4973422 | PHAGE_Burkho_KS5: gp9; DelCs14_4402; phage(gi327198007) | 7e-24 | Click |
39 | 4973437..4973847 | PHAGE_Burkho_phiE202: gp19, conserved hypothetical protein; DelCs14_4403; phage(gi134288771) | 4e-18 | Click |
40 | 4973950..4974093 | hypothetical protein; DelCs14_4404 | N/A | Click |
41 | 4974101..4974610 | hypothetical protein; DelCs14_4405 | N/A | Click |
42 | 4974617..4976659 | PHAGE_Burkho_2: gp15, hypothetical replication protein; DelCs14_4406; phage(gi134288692) | 2e-68 | Click |
43 | 4976675..4976905 | hypothetical protein; DelCs14_4407 | N/A | Click |
44 | 4976933..4977139 | hypothetical protein; DelCs14_4408 | N/A | Click |
45 | 4977143..4977379 | hypothetical protein; DelCs14_4409 | N/A | Click |
46 | 4977376..4977693 | PHAGE_Burkho_KS9: transcriptional regulator gp34; DelCs14_4410; phage(gi255033717) | 1e-05 | Click |
47 | 4977593..4977607 | attR CGCAGCTGCCGCCAG | N/A | Click |
48 | complement(4977650..4978939) | PHAGE_Burkho_KS9: integrase gp31; DelCs14_4411; phage(gi255033714) | 3e-114 | Click |
49 | 4979117..4981768 | PHAGE_Cafete_BV_PW1: putative DNA mismatch repair protein MutS; DelCs14_4412; phage(gi310831476) | 2e-32 | Click |