Definition Marinomonas mediterranea MMB-1 chromosome, complete genome.
Accession NC_015276
Length 4,684,316
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 40 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2014082..2014099  attL    AGGAGGCCAATGATGGCT  N/A  Click
2 2014094..2014669  PHAGE_Salmon_vB_SemP_Emek: antirepressor; Marme_1827; phage(gi399498814)  4e-21  Click
3 2014729..2015184  PHAGE_Cronob_ENT39118: protein umuD; Marme_1828; phage(gi431811072)  3e-27  Click
4 2015181..2016452  PHAGE_Salmon_vB_SosS_Oslo: error-prone lesion bypass DNA polymerase V; Marme_1829; phage(gi399528790)  6e-133  Click
5 2016567..2016827  hypothetical protein; Marme_1830  N/A  Click
6 2017160..2017175  attL    GGGCTTTTTCGTTTCT  N/A  Click
7 2017192..2017485  PHAGE_Ralsto_RSL1: unnamed protein product; Marme_1831; phage(gi189426958)  3e-08  Click
8 2017482..2018000  PHAGE_Klebsi_phiKO2: Gp54; Marme_1832; phage(gi46402140)  8e-05  Click
9 2017997..2018164  hypothetical protein; Marme_1833  N/A  Click
10 2018346..2018825  PHAGE_Entero_cdtI: putative small terminase subunit; Marme_1834; phage(gi148609383)  2e-23  Click
11 2018825..2020876  PHAGE_Entero_cdtI: putative large terminase subunit; Marme_1835; phage(gi148609384)  2e-160  Click
12 2020873..2021073  hypothetical protein; Marme_1836  N/A  Click
13 2021073..2022572  PHAGE_Vibrio_vB_VpaM_MAR: portal protein; Marme_1837; phage(gi428782728)  6e-50  Click
14 2022601..2023629  PHAGE_Pseudo_vB_PaeS_PMG1: Clp protease; Marme_1838; phage(gi374531650)  1e-24  Click
15 2023663..2024025  hypothetical phage-related protein; Marme_1839  N/A  Click
16 2024035..2025054  PHAGE_Entero_01: major capsid protein; Marme_1840; phage(gi38707831)  2e-20  Click
17 2025054..2025419  hypothetical protein; Marme_1841  N/A  Click
18 2025409..2025900  PHAGE_Halomo_1: hypothetical protein HAPgp07; Marme_1842; phage(gi167832352)  9e-18  Click
19 2025897..2026436  PHAGE_Halomo_1: hypothetical protein HAPgp08; Marme_1843; phage(gi167832353)  3e-10  Click
20 2026433..2027098  PHAGE_Halomo_1: putative baseplate assembly protein V; Marme_1844; phage(gi167832354)  2e-22  Click
21 2027112..2027309  PHAGE_Vibrio_VP882: putative phage-related protein; Marme_1845; phage(gi126010860)  1e-14  Click
22 2027309..2027650  PHAGE_Halomo_1: putative baseplate assembly protein; Marme_1846; phage(gi167832355)  4e-17  Click
23 2027637..2028638  PHAGE_Halomo_1: putative baseplate assembly protein J; Marme_1847; phage(gi167832356)  1e-70  Click
24 2028598..2029350  PHAGE_Halomo_1: putative tail protein; Marme_1848; phage(gi167832357)  2e-32  Click
25 2029347..2029883  PHAGE_Halomo_1: putative tail protein; Marme_1849; phage(gi167832358)  9e-31  Click
26 2029888..2030589  hypothetical protein; Marme_1850  N/A  Click
27 2030586..2030999  hypothetical protein; Marme_1851  N/A  Click
28 2031082..2031270  hypothetical protein; Marme_1852  N/A  Click
29 2031270..2032439  PHAGE_Halomo_1: putative tail sheath protein; Marme_1853; phage(gi167832365)  1e-108  Click
30 2032441..2032947  PHAGE_Halomo_1: putative tail tube protein; Marme_1854; phage(gi167832366)  3e-28  Click
31 2033003..2033572  PHAGE_Halomo_1: hypothetical protein HAPgp22; Marme_1855; phage(gi167832367)  7e-19  Click
32 2033767..2036550  PHAGE_Halomo_1: putative tail tape measure; Marme_1856; phage(gi167832368)  1e-83  Click
33 complement(2036752..2037699)  PROPHAGE_Neisse_MC58: IS30 family transposase; Marme_1857; phage(gi15677611)  5e-65  Click
34 2038077..2038835  hypothetical protein; Marme_1858  N/A  Click
35 2038997..2039644  hypothetical protein; Marme_1859  N/A  Click
36 2039742..2039757  attR    GGGCTTTTTCGTTTCT  N/A  Click
37 2039783..2040175  PHAGE_Halomo_1: putative tail protein; Marme_1860; phage(gi167832369)  5e-30  Click
38 2040159..2040368  PHAGE_Vibrio_VP882: phage tail X; Marme_1861; phage(gi126010875)  2e-14  Click
39 2040359..2041369  PHAGE_Halomo_1: putative tail protein; Marme_1862; phage(gi167832370)  9e-84  Click
40 2041602..2041757  hypothetical protein; Marme_1863  N/A  Click
41 2041758..2041892  hypothetical protein; Marme_1864  N/A  Click
42 2041944..2042438  hypothetical protein; Marme_1865  N/A  Click
43 2042527..2043474  PROPHAGE_Neisse_MC58: IS30 family transposase; Marme_1866; phage(gi15677611)  3e-65  Click
44 2047232..2047249  attR    AGGAGGCCAATGATGGCT  N/A  Click
Region 2, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(4656611..4657108)  PHAGE_Vibrio_VHML: major tail tube protein; Marme_4194; phage(gi27311208)  2e-15  Click
2 complement(4657111..4658205)  PHAGE_Vibrio_VHML: major tail sheath protein; Marme_4195; phage(gi27311206)  8e-17  Click
3 complement(4658218..4658679)  hypothetical protein; Marme_4196  N/A  Click
4 complement(4658679..4659479)  hypothetical protein; Marme_4197  N/A  Click
5 complement(4659476..4659985)  hypothetical protein; Marme_4198  N/A  Click
6 complement(4659973..4660545)  PHAGE_Vibrio_VHML: ORF33; Marme_4199; phage(gi27311201)  2e-11  Click
7 complement(4660542..4661354)  PROPHAGE_Salmon_Ty2: phage baseplate assembly protein; Marme_4200; phage(gi29143752)  1e-22  Click
8 complement(4661351..4661662)  PHAGE_Vibrio_VHML: baseplate wedge subunit; Marme_4201; phage(gi27311199)  1e-08  Click
9 complement(4661659..4662198)  PHAGE_Burkho_phi52237: phage baseplate assembly protein; Marme_4202; phage(gi72537705)  7e-13  Click
10 4662385..4662846  PHAGE_Pseudo_PA11: hypothetical protein ORF031; Marme_4203; phage(gi149408190)  2e-10  Click
11 4662849..4663091  hypothetical protein; Marme_4204  N/A  Click
12 4663081..4663215  hypothetical protein; Marme_4205  N/A  Click
13 complement(4663349..4663552)  hypothetical protein; Marme_4206  N/A  Click
14 complement(4663614..4664042)  PHAGE_Vibrio_vB_VchM_138: putative lysozyme; Marme_4207; phage(gi422936605)  3e-13  Click
15 4664297..4664917  PHAGE_Pseudo_MP42: c repressor; Marme_4208; phage(gi399528580)  4e-24  Click
16 complement(4664947..4665729)  PHAGE_Cafete_BV_PW1: putative ubiquitin-activating enzyme E1; Marme_4209; phage(gi310831425)  4e-05  Click