Definition | Polymorphum gilvum SL003B-26A1 chromosome, complete genome. |
---|---|
Accession | NC_015259 |
Length | 4,649,365 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 35 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 708097..708108 | attL GGCGACGACGGC | N/A | Click |
2 | 713390..713974 | PHAGE_Pseudo_vB_PaeS_PMG1: integrase; SL003B_0670; phage(gi374531680) | 1e-08 | Click |
3 | complement(714118..714489) | hypothetical protein; SL003B_0671 | N/A | Click |
4 | 714610..714623 | attL CACTTAACCTTCTT | N/A | Click |
5 | 714656..715702 | PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; SL003B_0672; phage(gi160688404) | 2e-06 | Click |
6 | 716282..719614 | PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; SL003B_0673; phage(gi414087138) | 1e-08 | Click |
7 | 719708..720016 | PROPHAGE_Shewan_MR-1: ISSod6, transposase; SL003B_0674; phage(gi24374783) | 2e-16 | Click |
8 | 720034..720420 | PROPHAGE_Brucel_1330: IS711, transposase orfB; SL003B_0675; phage(gi23501420) | 4e-17 | Click |
9 | 721048..721440 | transposon protein; SL003B_0676 | N/A | Click |
10 | 721498..723339 | PHAGE_Agroba_7_7_1: hypothetical protein; SL003B_0677; phage(gi435844368) | 1e-09 | Click |
11 | 724081..724377 | hypothetical protein; SL003B_0678 | N/A | Click |
12 | 724445..724924 | hypothetical protein; SL003B_0679 | N/A | Click |
13 | 725243..725809 | PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; SL003B_0680; phage(gi374531713) | 4e-05 | Click |
14 | 726146..726511 | phosphoglycerate kinase; SL003B_0681 | N/A | Click |
15 | complement(726722..727009) | hypothetical protein; SL003B_0683 | N/A | Click |
16 | 726943..727245 | hypothetical protein; SL003B_0682 | N/A | Click |
17 | 728097..728483 | transposase and inactivated derivatives-like protein; SL003B_0684 | N/A | Click |
18 | 728540..729046 | transposase and inactivated derivatives-like protein; SL003B_0685 | N/A | Click |
19 | complement(728869..729972) | PROPHAGE_Shewan_MR-1: IS110 family transposase; SL003B_0686; phage(gi24375433) | 6e-39 | Click |
20 | 730985..731545 | hypothetical protein; SL003B_0687 | N/A | Click |
21 | 731535..733232 | PHAGE_Bathyc_BpV1: hypothetical protein; SL003B_0688; phage(gi313768111) | 5e-05 | Click |
22 | 733316..733933 | phage integrase / plasmid pRiA4b ORF-3-like protein; SL003B_0689 | N/A | Click |
23 | complement(733975..734226) | hypothetical protein; SL003B_0690 | N/A | Click |
24 | 734386..734772 | hypothetical protein; SL003B_0691 | N/A | Click |
25 | complement(734795..735127) | PHAGE_Clostr_st: PemK family transcriptional regulator; SL003B_0692; phage(gi80159713) | 4e-06 | Click |
26 | complement(735121..735372) | transcriptional regulator/antitoxin, MazE; SL003B_0693 | N/A | Click |
27 | complement(735452..735811) | hypothetical protein; SL003B_0694 | N/A | Click |
28 | complement(735827..737422) | Plasmid transfer factor, traG; SL003B_0695 | N/A | Click |
29 | complement(737697..737870) | hypothetical protein; SL003B_0696 | N/A | Click |
30 | complement(737926..738399) | Plasmid partition protein ParA-like protein; SL003B_0697 | N/A | Click |
31 | 738556..738942 | transposase and inactivated derivatives-like protein; SL003B_0698 | N/A | Click |
32 | 738999..739505 | transposase and inactivated derivatives-like protein; SL003B_0699 | N/A | Click |
33 | complement(739477..739692) | hypothetical protein; SL003B_0700 | N/A | Click |
34 | 739811..740503 | PHAGE_Pseudo_F10: Conserved hypothetical protein; putative transcriptional regulator, LuxR family; SL003B_0701; phage(gi148912803) | 2e-05 | Click |
35 | 740657..741220 | Conjugation factor synthetase; TraI; SL003B_0702 | N/A | Click |
36 | 741517..742083 | PHAGE_Burkho_KS14: gp6; SL003B_0703; phage(gi327198275) | 2e-45 | Click |
37 | 742100..742113 | attR CACTTAACCTTCTT | N/A | Click |
38 | complement(742103..743149) | PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; SL003B_0704; phage(gi160688404) | 2e-06 | Click |
39 | 750481..750492 | attR GGCGACGACGGC | N/A | Click |
Region 2, total : 15 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 839552..839565 | attL CGATCCTGCCGGCG | N/A | Click |
2 | 853259..855193 | PHAGE_Singap_iridovirus: hypothetical protein ORF141R; SL003B_0799; phage(gi56692778) | 9e-12 | Click |
3 | 855387..855695 | PROPHAGE_Shewan_MR-1: ISSod6, transposase; SL003B_0800; phage(gi24374783) | 2e-16 | Click |
4 | 855713..856099 | PROPHAGE_Brucel_1330: IS711, transposase orfB; SL003B_0801; phage(gi23501420) | 4e-17 | Click |
5 | complement(856066..856488) | PHAGE_Megavi_lba: putative methylated-DNA-protein-cysteine methyltransferase; SL003B_0802; phage(gi448825193) | 2e-13 | Click |
6 | 856659..857600 | PHAGE_Azospi_Cd: hypothetical protein APCd_gp01; SL003B_0803; phage(gi168495104) | 3e-18 | Click |
7 | 857739..858383 | hypothetical protein; SL003B_0804 | N/A | Click |
8 | 858470..858937 | outer membrane lipoprotein; SL003B_0805 | N/A | Click |
9 | 859066..860151 | Bacterial regulatory protein LacI, HTH motif:Periplasmic binding protein/LacI transcriptional regulator; SL003B_0806 | N/A | Click |
10 | 860208..861683 | PHAGE_Lactob_KC5a: putative minor tail protein; SL003B_0807; phage(gi90592623) | 2e-05 | Click |
11 | complement(861694..862875) | aminotransferase, classes I and II superfamily; SL003B_0808 | N/A | Click |
12 | 863169..864296 | PHAGE_Acanth_moumouvirus: hypothetical protein; SL003B_0809; phage(gi441432084) | 6e-07 | Click |
13 | 864304..865278 | WD-repeat family protein; SL003B_0810 | N/A | Click |
14 | 865356..866948 | Gamma-glutamyltranspeptidase protein; SL003B_0811 | N/A | Click |
15 | 867022..867507 | hypothetical protein; SL003B_0812 | N/A | Click |
16 | 867248..867261 | attR CGATCCTGCCGGCG | N/A | Click |
17 | 867547..868593 | PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; SL003B_0813; phage(gi160688404) | 2e-06 | Click |
Region 3, total : 53 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1757138..1757149 | attL GCGCTCCGCGCA | N/A | Click |
2 | 1760742..1760756 | attL GCACAGCCCGCCGCC | N/A | Click |
3 | complement(1767092..1767658) | PHAGE_Rhodob_RcapMu: c-repressor; SL003B_1655; phage(gi356870844) | 8e-15 | Click |
4 | 1767909..1768202 | PHAGE_Rhodob_RcapMu: ner-like transcriptional regulator; SL003B_1656; phage(gi356870845) | 3e-13 | Click |
5 | 1768202..1768513 | hypothetical protein; SL003B_1657 | N/A | Click |
6 | 1768848..1769687 | PHAGE_Rhodob_RcapMu: ParB-like nuclease; SL003B_1658; phage(gi356870851) | 1e-38 | Click |
7 | 1769680..1770138 | PHAGE_Rhodob_RcapMu: conserved transposable prophage protein; SL003B_1659; phage(gi356870852) | 7e-22 | Click |
8 | 1770135..1770353 | hypothetical protein; SL003B_1660 | N/A | Click |
9 | 1770362..1772515 | PHAGE_Rhodob_RC1: integrase; SL003B_1661; phage(gi472339716) | 6e-142 | Click |
10 | 1772587..1773351 | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_1662; phage(gi472339715) | 7e-48 | Click |
11 | 1773351..1773992 | PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp08; SL003B_1663; phage(gi215479932) | 1e-10 | Click |
12 | 1773989..1774369 | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_1664; phage(gi472339713) | 2e-21 | Click |
13 | 1774356..1774628 | hypothetical protein; SL003B_1665 | N/A | Click |
14 | 1774625..1775017 | hypothetical protein; SL003B_1666 | N/A | Click |
15 | 1775014..1775673 | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_1667; phage(gi472339708) | 1e-78 | Click |
16 | 1775673..1775975 | hypothetical protein; SL003B_1668 | N/A | Click |
17 | 1775972..1776262 | hypothetical protein; SL003B_1669 | N/A | Click |
18 | 1776583..1776822 | hypothetical protein; SL003B_1670 | N/A | Click |
19 | 1776819..1777451 | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_1671; phage(gi472339703) | 4e-31 | Click |
20 | 1777448..1777822 | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_1672; phage(gi472339699) | 4e-20 | Click |
21 | 1777987..1778742 | PHAGE_Cyanop_PSS2: phage tail protein; SL003B_1673; phage(gi254729476) | 2e-08 | Click |
22 | 1778739..1779272 | hypothetical protein; SL003B_1674 | N/A | Click |
23 | 1779269..1779487 | PHAGE_Burkho_KS10: hypothetical protein KS10_gp07; SL003B_1675; phage(gi198449269) | 4e-11 | Click |
24 | 1779487..1779813 | hypothetical protein; SL003B_1676 | N/A | Click |
25 | 1779810..1780115 | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_1677; phage(gi472339695) | 3e-07 | Click |
26 | 1780126..1780689 | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_1678; phage(gi472339694) | 1e-15 | Click |
27 | 1780690..1782102 | PHAGE_Entero_Mu: putative portal protein; SL003B_1679; phage(gi9633519) | 4e-31 | Click |
28 | 1782140..1784179 | PHAGE_Marino_P12026: phage portal protein, HK97 family; SL003B_1680; phage(gi399528319) | 7e-12 | Click |
29 | 1784181..1785062 | PHAGE_Marino_P12026: phage prohead protease; SL003B_1681; phage(gi399528321) | 7e-07 | Click |
30 | 1785426..1786721 | PHAGE_Xantho_Xp10: head protein; major capsid subunit precursor; SL003B_1682; phage(gi32128421) | 2e-28 | Click |
31 | 1786945..1787493 | hypothetical protein; SL003B_1683 | N/A | Click |
32 | 1787505..1788008 | hypothetical protein; SL003B_1684 | N/A | Click |
33 | 1788082..1788096 | attR GCACAGCCCGCCGCC | N/A | Click |
34 | 1788146..1788382 | hypothetical protein; SL003B_1685 | N/A | Click |
35 | 1788392..1788958 | hypothetical protein; SL003B_1686 | N/A | Click |
36 | 1789085..1789429 | hypothetical protein; SL003B_1687 | N/A | Click |
37 | 1789460..1789726 | hypothetical protein; SL003B_1688 | N/A | Click |
38 | 1789731..1790864 | PHAGE_Rhodob_RcapMu: putative tail fiber protein; SL003B_1689; phage(gi356870896) | 3e-05 | Click |
39 | 1790861..1791301 | hypothetical protein; SL003B_1690 | N/A | Click |
40 | 1791392..1791700 | hypothetical protein; SL003B_1691 | N/A | Click |
41 | 1792067..1792474 | hypothetical protein; SL003B_1692 | N/A | Click |
42 | 1792636..1793061 | hypothetical protein; SL003B_1693 | N/A | Click |
43 | 1793108..1793713 | hypothetical protein; SL003B_1694 | N/A | Click |
44 | 1793723..1793953 | hypothetical protein; SL003B_1695 | N/A | Click |
45 | 1793920..1794396 | hypothetical protein; SL003B_1696 | N/A | Click |
46 | 1794393..1794695 | hypothetical protein; SL003B_1697 | N/A | Click |
47 | 1794688..1796610 | PHAGE_Synech_S_CBS1: tail tape measure protein; SL003B_1698; phage(gi356870809) | 4e-23 | Click |
48 | 1796607..1797029 | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_1699; phage(gi472339674) | 4e-19 | Click |
49 | 1797057..1797590 | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_1700; phage(gi472339673) | 2e-45 | Click |
50 | 1797587..1798021 | PHAGE_Rhodob_RC1: tail assembly protein; SL003B_1701; phage(gi472339672) | 9e-24 | Click |
51 | 1798018..1800996 | PHAGE_Rhodob_RC1: tail fiber protein; SL003B_1702; phage(gi472339671) | 0.0 | Click |
52 | 1801007..1802806 | hypothetical protein; SL003B_1703 | N/A | Click |
53 | complement(1803074..1803149) | tRNA | N/A | Click |
54 | 1803266..1804435 | PHAGE_Pseudo_vB_PaeS_PMG1: integrase; SL003B_1704; phage(gi374531680) | 5e-08 | Click |
55 | 1804533..1804841 | hypothetical protein; SL003B_1705 | N/A | Click |
56 | 1805002..1805244 | hypothetical protein; SL003B_1706 | N/A | Click |
57 | 1805241..1807580 | PHAGE_Roseob_1: integrase; SL003B_1707; phage(gi331028101) | 1e-121 | Click |
58 | 1808265..1808276 | attR GCGCTCCGCGCA | N/A | Click |
Region 4, total : 18 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(3144756..3145169) | PHAGE_Sulfit_pCB2047_C: hypothetical protein; SL003B_2915; phage(gi472341760) | 1e-07 | Click |
2 | complement(3145166..3145378) | hypothetical protein; SL003B_2916 | N/A | Click |
3 | complement(3145501..3146376) | PHAGE_Rhodov_RS1: hypothetical protein; SL003B_2917; phage(gi472342900) | 1e-22 | Click |
4 | complement(3146421..3147125) | PHAGE_Tetras_SI1: hypothetical protein; SL003B_2918; phage(gi472342232) | 3e-08 | Click |
5 | complement(3147136..3151005) | PHAGE_Tetras_SI1: hypothetical protein; SL003B_2919; phage(gi472342233) | 5e-35 | Click |
6 | complement(3150993..3151454) | PHAGE_Roseob_1: phage cell wall peptidase; SL003B_2920; phage(gi331028137) | 6e-24 | Click |
7 | complement(3151444..3152337) | PHAGE_Tetras_SI1: hypothetical protein; SL003B_2921; phage(gi472342235) | 1e-28 | Click |
8 | complement(3152356..3152991) | PHAGE_Roseob_1: putative glycoside hydrolase; SL003B_2922; phage(gi331028135) | 5e-34 | Click |
9 | 3153088..3153342 | hypothetical protein; SL003B_2923 | N/A | Click |
10 | complement(3153365..3153952) | PHAGE_Entero_mEp460: tail length tape measure protein; SL003B_2924; phage(gi428782329) | 3e-11 | Click |
11 | complement(3154174..3154524) | Gene transfer agent-like protein; SL003B_2925 | N/A | Click |
12 | complement(3154714..3155127) | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; SL003B_2926; phage(gi461474972) | 8e-21 | Click |
13 | complement(3155151..3155567) | Gene transfer agent-like protein; SL003B_2927 | N/A | Click |
14 | complement(3155886..3156443) | PHAGE_Tetras_SI1: hypothetical protein; SL003B_2928; phage(gi472342252) | 1e-07 | Click |
15 | complement(3156532..3157830) | PHAGE_Salmon_ST64B: Major capsid protein precursor; SL003B_2929; phage(gi23505451) | 6e-81 | Click |
16 | complement(3157827..3158279) | PHAGE_Tetras_SI1: phage prohead protease; SL003B_2930; phage(gi472342256) | 6e-21 | Click |
17 | complement(3158747..3159886) | PHAGE_Marino_P12026: phage portal protein, HK97 family; SL003B_2931; phage(gi399528319) | 1e-22 | Click |
18 | complement(3160211..3161452) | PHAGE_Strept_6: terminase large subunit; SL003B_2932; phage(gi93007440) | 4e-65 | Click |
Region 5, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4072282..4075773 | PHAGE_Stenot_S1: putative primase; SL003B_3760; phage(gi213163899) | 1e-18 | Click |
2 | 4075770..4076297 | hypothetical protein; SL003B_3761 | N/A | Click |
3 | 4076294..4076722 | hypothetical protein; SL003B_3762 | N/A | Click |
4 | 4076809..4076928 | hypothetical protein; SL003B_3763 | N/A | Click |
5 | 4077245..4078609 | PHAGE_Strept_1: transferase; SL003B_3764; phage(gi39653711) | 2e-56 | Click |
6 | 4079323..4079721 | Site-specific DNA methylase; SL003B_3765 | N/A | Click |
7 | 4079718..4079933 | PHAGE_Xantho_Xp10: hypothetical protein Xp10p34; SL003B_3766; phage(gi32128446) | 1e-08 | Click |
8 | 4079978..4080175 | hypothetical protein; SL003B_3767 | N/A | Click |
9 | complement(4080224..4080796) | PHAGE_Deftia_14: hypothetical protein; SL003B_3768; phage(gi282599144) | 1e-06 | Click |
10 | complement(4080887..4081111) | PHAGE_Roseob_1: hypothetical protein RDJLphi1_gp12; SL003B_3769; phage(gi331028066) | 8e-15 | Click |
11 | complement(4081571..4082608) | PROPHAGE_Shewan_MR-1: IS110 family transposase; SL003B_3770; phage(gi24375433) | 3e-20 | Click |
12 | 4082798..4083394 | hypothetical protein; SL003B_3771 | N/A | Click |
13 | 4083504..4085342 | PHAGE_Stenot_S1: putative terminase large subunit; SL003B_3772; phage(gi213163902) | 2e-73 | Click |
14 | 4085333..4085554 | hypothetical protein; SL003B_3773 | N/A | Click |
15 | 4085554..4087086 | PHAGE_Stenot_S1: putative portal protein; SL003B_3774; phage(gi213163905) | 6e-91 | Click |
16 | 4087092..4089146 | PHAGE_Stenot_S1: putative major head protein; SL003B_3775; phage(gi213163906) | 9e-79 | Click |
Region 6, total : 18 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4086841..4086856 | attL CTGTCGATCCGCTCGG | N/A | Click |
2 | 4092561..4093499 | PHAGE_Xantho_Xp15: possible phage minor tail protein; SL003B_3782; phage(gi66392066) | 3e-06 | Click |
3 | 4093502..4093939 | hypothetical protein; SL003B_3783 | N/A | Click |
4 | 4093948..4094166 | hypothetical protein; SL003B_3784 | N/A | Click |
5 | 4094159..4096594 | PHAGE_phiJL001: tail length tape measure protein; SL003B_3785; phage(gi62327186) | 1e-28 | Click |
6 | 4096598..4097224 | PHAGE_Roseob_1: putative glycoside hydrolase; SL003B_3786; phage(gi331028135) | 4e-49 | Click |
7 | 4097221..4097571 | PHAGE_Sulfit_pCB2047_B: hypothetical protein; SL003B_3787; phage(gi472342284) | 4e-09 | Click |
8 | 4097701..4098345 | PHAGE_Pseudo_PAJU2: putative endolysin; SL003B_3788; phage(gi209552446) | 2e-12 | Click |
9 | 4098548..4099432 | PHAGE_Roseob_1: gene transfer agent; SL003B_3789; phage(gi331028136) | 2e-67 | Click |
10 | 4099429..4099863 | PHAGE_Roseob_1: phage cell wall peptidase; SL003B_3790; phage(gi331028137) | 1e-26 | Click |
11 | 4099873..4103916 | PHAGE_Roseob_1: gene transfer agent; SL003B_3791; phage(gi331028138) | 0.0 | Click |
12 | 4103928..4105850 | PHAGE_Roseob_1: ribonuclease III; SL003B_3792; phage(gi331028139) | 2e-20 | Click |
13 | complement(4106368..4107927) | 40-residue YVTN family beta-propeller repeat protein; SL003B_3793 | N/A | Click |
14 | complement(4108626..4109111) | Metal-binding protein-like protein; SL003B_3794 | N/A | Click |
15 | complement(4109254..4111701) | PHAGE_Parame_AR158: hypothetical protein AR158_C785L; SL003B_3795; phage(gi157953975) | 5e-41 | Click |
16 | complement(4111820..4113295) | Multicopper oxidase type 2; SL003B_3796 | N/A | Click |
17 | complement(4113369..4113764) | hypothetical protein; SL003B_3797 | N/A | Click |
18 | 4113822..4114304 | cytochrome c, class I; SL003B_3798 | N/A | Click |
19 | complement(4114437..4115504) | integrase core domain containing protein; SL003B_3799 | N/A | Click |
20 | 4123574..4123589 | attR CTGTCGATCCGCTCGG | N/A | Click |
Region 7, total : 51 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4278351..4278362 | attL GTGCCGCGCGGC | N/A | Click |
2 | complement(4280481..4281305) | PHAGE_Lactob_LF1: tail fiber; SL003B_3965; phage(gi418489400) | 1e-05 | Click |
3 | complement(4281442..4282011) | RNA polymerase sigma factor; SL003B_3966 | N/A | Click |
4 | 4282689..4282988 | transcriptional regulator, XRE family; SL003B_3967 | N/A | Click |
5 | 4282948..4283604 | RES domain protein; SL003B_3968 | N/A | Click |
6 | complement(4283920..4284642) | PHAGE_Pseudo_LBL3: putative structural protein; SL003B_3969; phage(gi197261393) | 3e-06 | Click |
7 | complement(4284706..4285710) | PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; SL003B_3970; phage(gi428782753) | 1e-38 | Click |
8 | complement(4285710..4285970) | PHAGE_Entero_PsP3: gp8; SL003B_3971; phage(gi41057360) | 3e-05 | Click |
9 | complement(4285967..4286398) | PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; SL003B_3972; phage(gi428782751) | 3e-17 | Click |
10 | complement(4286399..4288882) | PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; SL003B_3973; phage(gi428782750) | 4e-30 | Click |
11 | complement(4289017..4289469) | hypothetical protein; SL003B_3974 | N/A | Click |
12 | complement(4289495..4290013) | phage tail tube protein FII; SL003B_3975 | N/A | Click |
13 | complement(4290052..4291314) | PROPHAGE_Xylell_Temecula1: contractile tail sheath protein; SL003B_3976; phage(gi28198986) | 9e-55 | Click |
14 | complement(4291490..4291999) | PHAGE_Sinorh_PBC5: hypothetical protein PBC5p15; SL003B_3977; phage(gi18071254) | 1e-14 | Click |
15 | complement(4291996..4293069) | PHAGE_Tsukam_TPA2: putative tail fiber protein; SL003B_3978; phage(gi326425064) | 1e-06 | Click |
16 | complement(4293081..4296293) | PHAGE_Bacill_vB_BceM_Bc431v3: putative tail protein; SL003B_3979; phage(gi472437641) | 6e-61 | Click |
17 | complement(4296301..4297455) | phage protein gp27; SL003B_3980 | N/A | Click |
18 | complement(4297452..4298300) | PHAGE_Ralsto_phiRSA1: baseplate J-like protein; SL003B_3981; phage(gi145708095) | 3e-32 | Click |
19 | complement(4298297..4298704) | PHAGE_Burkho_phiE202: gp35, phage baseplate assembly protein; SL003B_3982; phage(gi134288768) | 1e-12 | Click |
20 | complement(4298914..4299480) | phage-related baseplate assembly protein; SL003B_3983 | N/A | Click |
21 | complement(4299477..4300946) | PHAGE_Rhodob_RcapMu: putative tail fiber protein; SL003B_3984; phage(gi356870896) | 1e-05 | Click |
22 | complement(4300943..4301422) | PHAGE_Rhodob_RcapMu: virion morphogenesis protein; SL003B_3985; phage(gi356870876) | 3e-14 | Click |
23 | complement(4301419..4301835) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_3986; phage(gi472339680) | 5e-07 | Click |
24 | complement(4301857..4302126) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_3987; phage(gi472339681) | 1e-06 | Click |
25 | complement(4302204..4303103) | PHAGE_Rhodob_RC1: major head subunit; SL003B_3988; phage(gi472339682) | 3e-75 | Click |
26 | complement(4303140..4303541) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_3989; phage(gi472339683) | 7e-24 | Click |
27 | complement(4303591..4304604) | PHAGE_Rhodob_RC1: I protein; SL003B_3990; phage(gi472339684) | 2e-36 | Click |
28 | complement(4304957..4306219) | PHAGE_Escher_D108: virion morphogenesis; SL003B_3991; phage(gi281199673) | 1e-42 | Click |
29 | complement(4306209..4307771) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_3992; phage(gi472339690) | 2e-83 | Click |
30 | complement(4307768..4309438) | PHAGE_Entero_Mu: putative portal protein; SL003B_3993; phage(gi9633519) | 4e-99 | Click |
31 | complement(4309435..4310019) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_3994; phage(gi472339694) | 4e-44 | Click |
32 | complement(4310022..4310318) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_3995; phage(gi472339695) | 9e-29 | Click |
33 | complement(4310322..4310663) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_3996; phage(gi472339696) | 6e-12 | Click |
34 | complement(4310802..4311194) | hypothetical protein; SL003B_3997 | N/A | Click |
35 | complement(4311388..4312329) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_3998; phage(gi472339698) | 9e-19 | Click |
36 | complement(4312420..4312812) | PHAGE_Rhodob_RcapMu: putative transcriptional regulator; SL003B_3999; phage(gi356870865) | 8e-06 | Click |
37 | complement(4312817..4313464) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_4000; phage(gi472339703) | 5e-34 | Click |
38 | complement(4313461..4313781) | hypothetical protein; SL003B_4001 | N/A | Click |
39 | complement(4313760..4314110) | hypothetical protein; SL003B_4002 | N/A | Click |
40 | complement(4314110..4314763) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_4003; phage(gi472339708) | 8e-75 | Click |
41 | complement(4314765..4315166) | hypothetical protein; SL003B_4004 | N/A | Click |
42 | complement(4315163..4315423) | hypothetical protein; SL003B_4005 | N/A | Click |
43 | complement(4315413..4315799) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_4006; phage(gi472339713) | 5e-24 | Click |
44 | complement(4315796..4316428) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_4007; phage(gi472339714) | 1e-13 | Click |
45 | complement(4316428..4317192) | PHAGE_Rhodob_RC1: hypothetical protein; SL003B_4008; phage(gi472339715) | 1e-44 | Click |
46 | 4316906..4316917 | attR GTGCCGCGCGGC | N/A | Click |
47 | complement(4317272..4319464) | PHAGE_Rhodob_RC1: integrase; SL003B_4009; phage(gi472339716) | 8e-126 | Click |
48 | complement(4319461..4319925) | PHAGE_Rhodob_RcapMu: conserved transposable prophage protein; SL003B_4010; phage(gi356870852) | 9e-41 | Click |
49 | complement(4319929..4320792) | PHAGE_Rhodob_RcapMu: ParB-like nuclease; SL003B_4011; phage(gi356870851) | 2e-19 | Click |
50 | complement(4321510..4321743) | hypothetical protein; SL003B_4012 | N/A | Click |
51 | complement(4321842..4322171) | PHAGE_Rhodob_RcapMu: ner-like transcriptional regulator; SL003B_4013; phage(gi356870845) | 2e-11 | Click |
52 | 4322290..4322814 | PHAGE_Rhodob_RcapMu: c-repressor; SL003B_4014; phage(gi356870844) | 7e-12 | Click |
53 | complement(4323715..4325712) | PHAGE_Parame_AR158: hypothetical protein AR158_C785L; SL003B_4015; phage(gi157953975) | 4e-14 | Click |
Region 8, total : 33 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4346891..4346903 | attL GCCGGAGCTCGCC | N/A | Click |
2 | complement(4353634..4354656) | PHAGE_Vibrio_VHML: ORF26; SL003B_4045; phage(gi27311193) | 1e-47 | Click |
3 | complement(4354751..4355140) | hypothetical protein; SL003B_4046 | N/A | Click |
4 | complement(4355158..4356477) | PHAGE_Entero_HK225: head maturation protease C; SL003B_4047; phage(gi428782381) | 6e-36 | Click |
5 | complement(4356485..4357915) | PHAGE_Vibrio_VHML: ORF23; SL003B_4048; phage(gi27311190) | 3e-75 | Click |
6 | complement(4358181..4360109) | PHAGE_Vibrio_VHML: ORF22; SL003B_4049; phage(gi27311189) | 2e-81 | Click |
7 | complement(4360072..4360641) | terminase small subunit, Nu1; SL003B_4050 | N/A | Click |
8 | 4360789..4361010 | PHAGE_Roseob_1: hypothetical protein RDJLphi1_gp12; SL003B_4051; phage(gi331028066) | 6e-15 | Click |
9 | 4361113..4361658 | PHAGE_Deftia_14: hypothetical protein; SL003B_4052; phage(gi282599144) | 2e-05 | Click |
10 | 4361663..4361908 | hypothetical protein; SL003B_4053 | N/A | Click |
11 | complement(4361961..4362164) | PHAGE_Xantho_Xop411: hypothetical protein XPphiXo411_gp34; SL003B_4054; phage(gi157325489) | 3e-06 | Click |
12 | complement(4362179..4363657) | PHAGE_Strept_1: transferase; SL003B_4055; phage(gi39653711) | 2e-59 | Click |
13 | complement(4363896..4364336) | hypothetical protein; SL003B_4056 | N/A | Click |
14 | complement(4364329..4364529) | hypothetical protein; SL003B_4057 | N/A | Click |
15 | complement(4364526..4364783) | PHAGE_Tsukam_TPA2: hypothetical protein; SL003B_4058; phage(gi326425080) | 2e-09 | Click |
16 | complement(4364780..4365319) | PHAGE_Tetras_SI1: hypothetical protein; SL003B_4059; phage(gi472342269) | 2e-05 | Click |
17 | complement(4365427..4368354) | PHAGE_Actino_phiAsp2: Pas55; SL003B_4060; phage(gi48697456) | 6e-61 | Click |
18 | complement(4368347..4369627) | PHAGE_phiJL001: exonuclease V; SL003B_4061; phage(gi62327199) | 1e-62 | Click |
19 | complement(4369624..4370394) | PHAGE_Burkho_BcepGomr: BcepGomrgp43; SL003B_4062; phage(gi146329955) | 3e-21 | Click |
20 | complement(4370403..4370666) | hypothetical protein; SL003B_4063 | N/A | Click |
21 | complement(4370759..4370986) | hypothetical protein; SL003B_4064 | N/A | Click |
22 | complement(4370992..4371735) | PHAGE_Macaci_1: large tegument protein; SL003B_4065; phage(gi30984464) | 8e-09 | Click |
23 | complement(4371742..4372575) | PHAGE_Salico_CGphi29: hypothetical protein; SL003B_4066; phage(gi472340162) | 3e-14 | Click |
24 | complement(4372575..4372874) | hypothetical protein; SL003B_4067 | N/A | Click |
25 | complement(4372871..4373365) | hypothetical protein; SL003B_4068 | N/A | Click |
26 | complement(4373365..4373706) | hypothetical protein; SL003B_4069 | N/A | Click |
27 | complement(4373741..4374316) | hypothetical protein; SL003B_4070 | N/A | Click |
28 | complement(4374446..4375381) | hypothetical protein; SL003B_4071 | N/A | Click |
29 | complement(4375341..4375940) | hypothetical protein; SL003B_4072 | N/A | Click |
30 | complement(4376093..4376863) | PROPHAGE_Escher_CFT073: transposase/IS protein; SL003B_4073; phage(gi26248359) | 2e-43 | Click |
31 | complement(4376860..4378356) | PROPHAGE_Escher_CFT073: transposase; SL003B_4074; phage(gi26248360) | 2e-13 | Click |
32 | 4378871..4380133 | PROPHAGE_Escher_CFT073: transposase; SL003B_4075; phage(gi26248360) | 3e-11 | Click |
33 | 4380187..4380900 | PROPHAGE_Escher_CFT073: transposase/IS protein; SL003B_4076; phage(gi26248359) | 9e-39 | Click |
34 | 4381079..4381091 | attR GCCGGAGCTCGCC | N/A | Click |
35 | 4381190..4382098 | PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; SL003B_4077; phage(gi26249446) | 6e-17 | Click |
Region 9, total : 15 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4417137..4417493 | PHAGE_Stx2_c_1717: transposase; SL003B_4113; phage(gi209447152) | 1e-17 | Click |
2 | 4417563..4419128 | PHAGE_Stx2_c_1717: transposase; SL003B_4114; phage(gi209447153) | 3e-84 | Click |
3 | complement(4419111..4419779) | PHAGE_Vibrio_vB_VpaM_MAR: portal protein; SL003B_4115; phage(gi428782728) | 1e-26 | Click |
4 | complement(4419784..4419999) | hypothetical protein; SL003B_4116 | N/A | Click |
5 | complement(4420003..4422876) | PHAGE_Synech_S_CBS1: large terminase subunit; SL003B_4117; phage(gi356870795) | 9e-91 | Click |
6 | complement(4423043..4423654) | hypothetical protein; SL003B_4119 | N/A | Click |
7 | 4423653..4424069 | PHAGE_Roseob_1: hypothetical protein RDJLphi1_gp12; SL003B_4118; phage(gi331028066) | 5e-15 | Click |
8 | 4424165..4424752 | hypothetical protein; SL003B_4120 | N/A | Click |
9 | complement(4424762..4425031) | PHAGE_Xantho_OP1: hypothetical protein OP1_ORF35; SL003B_4121; phage(gi84662628) | 1e-07 | Click |
10 | complement(4425028..4426017) | PHAGE_Burkho_BcepC6B: putative methyl transferase protein; SL003B_4122; phage(gi48697223) | 2e-70 | Click |
11 | complement(4426017..4427336) | PHAGE_Strept_1: transferase; SL003B_4123; phage(gi39653711) | 3e-56 | Click |
12 | complement(4427653..4427772) | hypothetical protein; SL003B_4124 | N/A | Click |
13 | complement(4427859..4428287) | hypothetical protein; SL003B_4125 | N/A | Click |
14 | complement(4428284..4428811) | hypothetical protein; SL003B_4126 | N/A | Click |
15 | complement(4428808..4432299) | PHAGE_Entero_P4: DNA primase; SL003B_4127; phage(gi9627512) | 7e-20 | Click |