Definition Lactobacillus acidophilus 30SC chromosome, complete genome.
Accession NC_015214
Length 2,078,001
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 64 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1266959..1267135)  PHAGE_Pelagi_HTVC008M: 30S ribosomal protein S21; LAC30SC_06425; phage(gi460042545)  2e-05  Click
2 1267312..1268148  PEP synthetase regulatory protein; LAC30SC_06430  N/A  Click
3 1268922..1269449  peptide methionine sulfoxide reductase; LAC30SC_06445  N/A  Click
4 1269649..1269668  attL    TGTTGCACAAATGTTGCACA  N/A  Click
5 complement(1269858..1270736)  PHAGE_Lactob_Lj928: putative lysin; LAC30SC_06450; phage(gi41179337)  1e-51  Click
6 complement(1270726..1271148)  PHAGE_Lactob_Lj928: putative holin; LAC30SC_06455; phage(gi41179336)  2e-06  Click
7 complement(1271138..1271341)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1420; LAC30SC_06460; phage(gi41179335)  1e-17  Click
8 complement(1271331..1271570)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1421; LAC30SC_06465; phage(gi41179334)  7e-05  Click
9 complement(1271587..1271988)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1422; LAC30SC_06470; phage(gi41179333)  1e-52  Click
10 complement(1272001..1275225)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1423; LAC30SC_06475; phage(gi41179332)  1e-43  Click
11 complement(1275238..1275720)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1424; LAC30SC_06480; phage(gi41179331)  6e-12  Click
12 complement(1275720..1278152)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1425; LAC30SC_06485; phage(gi41179330)  2e-171  Click
13 complement(1278152..1279069)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1425c; LAC30SC_06490; phage(gi41179329)  3e-44  Click
14 complement(1279060..1281738)  PHAGE_Lactob_1: putative tape measure protein; LAC30SC_06495; phage(gi62327110)  4e-133  Click
15 complement(1281738..1282043)  PHAGE_Lactoc_ul36: hypothetical protein ul36_49; LAC30SC_06500; phage(gi21716120)  1e-06  Click
16 complement(1282091..1282477)  PHAGE_Entero_phiEf11: putative phage protein; LAC30SC_06505; phage(gi282598743)  6e-14  Click
17 complement(1282488..1283138)  PHAGE_Lactoc_ul36: major tail protein; LAC30SC_06510; phage(gi21716118)  2e-12  Click
18 complement(1283139..1283525)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1429; LAC30SC_06515; phage(gi41179324)  2e-12  Click
19 complement(1283515..1283898)  PHAGE_Entero_phiEf11: phage protein HK97; LAC30SC_06520; phage(gi282598738)  1e-17  Click
20 complement(1283891..1284202)  PHAGE_Lactoc_1: ORF39; LAC30SC_06525; phage(gi13786570)  6e-05  Click
21 complement(1284186..1284539)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1432; LAC30SC_06530; phage(gi41179321)  2e-45  Click
22 complement(1284631..1285572)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1433; LAC30SC_06535; phage(gi41179320)  3e-158  Click
23 complement(1285587..1286150)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1434; LAC30SC_06540; phage(gi41179319)  1e-72  Click
24 complement(1286247..1286495)  PHAGE_Lactob_LP65: hypothetical protein LP65_gp078; LAC30SC_06545; phage(gi56693126)  1e-17  Click
25 complement(1286555..1287541)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1437; LAC30SC_06550; phage(gi41179316)  3e-53  Click
26 complement(1287525..1288955)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1438; LAC30SC_06555; phage(gi41179315)  3e-154  Click
27 complement(1288967..1290235)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1439; LAC30SC_06560; phage(gi41179314)  0.0  Click
28 complement(1290222..1290446)  PHAGE_Strept_6: putative terminase small subunit; LAC30SC_06565; phage(gi28876466)  5e-13  Click
29 complement(1290714..1291160)  PHAGE_Entero_phiEf11: SbcC domain protein; LAC30SC_06570; phage(gi282598758)  2e-12  Click
30 complement(1291190..1291612)  PHAGE_Lactob_Lj928: putative terminase small subunit; LAC30SC_06575; phage(gi41179311)  2e-16  Click
31 complement(1291590..1291697)  hypothetical protein; LAC30SC_06580  N/A  Click
32 complement(1292686..1293207)  PHAGE_Lactob_H: hypothetical protein; LAC30SC_06585; phage(gi148750883)  3e-13  Click
33 complement(1293362..1293460)  hypothetical protein; LAC30SC_06590  N/A  Click
34 complement(1293460..1293855)  PHAGE_Lactob_AQ113: phage protein-Restriction nuclease superfamily; LAC30SC_06595; phage(gi446730281)  6e-31  Click
35 complement(1293860..1293961)  hypothetical protein; LAC30SC_06600  N/A  Click
36 complement(1293973..1294068)  hypothetical protein; LAC30SC_06605  N/A  Click
37 complement(1294065..1294229)  hypothetical protein; LAC30SC_06610  N/A  Click
38 complement(1294217..1294456)  PHAGE_Lactob_Lj771: hypothetical protein LJ771_023; LAC30SC_06615; phage(gi163932175)  4e-05  Click
39 complement(1294449..1294637)  hypothetical protein; LAC30SC_06620  N/A  Click
40 complement(1294777..1294968)  hypothetical protein; LAC30SC_06625  N/A  Click
41 complement(1294971..1295417)  hypothetical protein; LAC30SC_06630  N/A  Click
42 complement(1295414..1295644)  hypothetical protein; LAC30SC_06635  N/A  Click
43 complement(1295641..1296375)  PHAGE_Staphy_vB_SepiS_phiIPLA5: DNA replication protein; LAC30SC_06640; phage(gi399528938)  4e-35  Click
44 complement(1296377..1297174)  PHAGE_Lactob_Lj965: putative replication protein; LAC30SC_06645; phage(gi41179231)  2e-60  Click
45 complement(1297177..1298058)  PHAGE_Lactob_Lj928: putative replication protein; LAC30SC_06650; phage(gi41179303)  7e-44  Click
46 complement(1298079..1298450)  hypothetical protein; LAC30SC_06655  N/A  Click
47 complement(1298515..1298685)  hypothetical protein; LAC30SC_06660  N/A  Click
48 complement(1298702..1298926)  hypothetical protein; LAC30SC_06665  N/A  Click
49 complement(1298949..1299104)  hypothetical protein; LAC30SC_06670  N/A  Click
50 complement(1299094..1299393)  PHAGE_Lactob_1: hypothetical protein Lv-1_gp31; LAC30SC_06675; phage(gi219563228)  3e-10  Click
51 complement(1299399..1299608)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1453; LAC30SC_06680; phage(gi41179300)  5e-11  Click
52 1299671..1299892  hypothetical protein; LAC30SC_06685  N/A  Click
53 complement(1299889..1300125)  hypothetical protein; LAC30SC_06690  N/A  Click
54 complement(1300112..1300921)  PHAGE_Lactob_Lj928: putative antirepressor; LAC30SC_06695; phage(gi41179298)  1e-92  Click
55 complement(1300981..1301187)  PHAGE_Lactob_KC5a: putative CI-like repressor; LAC30SC_06700; phage(gi90592580)  2e-09  Click
56 1301359..1301727  PHAGE_Lactob_JCL1032: putative CI-like repressor; LAC30SC_06705; phage(gi418489143)  2e-13  Click
57 1301731..1302171  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1458; LAC30SC_06710; phage(gi41179295)  7e-05  Click
58 1302198..1302515  hypothetical protein; LAC30SC_06715  N/A  Click
59 1302541..1303260  hypothetical protein; LAC30SC_06720  N/A  Click
60 1303327..1303794  hypothetical protein; LAC30SC_06725  N/A  Click
61 1303820..1304623  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0291; LAC30SC_06730; phage(gi41179221)  2e-11  Click
62 1304817..1305938  PHAGE_Lactob_LF1: phage integrase; LAC30SC_06735; phage(gi418489411)  5e-75  Click
63 1305964..1305983  attR    TGTTGCACAAATGTTGCACA  N/A  Click
64 1306040..1306918  hypothetical protein; LAC30SC_06740  N/A  Click
65 1307095..1307355  hypothetical protein; LAC30SC_06745  N/A  Click
66 1307330..1307983  PHAGE_Strept_SMP: hypothetical protein; LAC30SC_06750; phage(gi119953754)  6e-20  Click