Definition Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome.
Accession NC_015172
Length 3,406,739
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 49 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 323377..323390  attL    AGGATGGAAAATAA  N/A  Click
2 333052..334482  PHAGE_Megavi_chiliensis: cysteinyl-tRNA synthetase ; Sgly_0303; phage(gi363540733)  1e-40  Click
3 334467..334895  ribonuclease III; Sgly_0304  N/A  Click
4 334949..335458  PHAGE_Lausan: dihydrofolate reductase-thymidylate synthase ; Sgly_0305; phage(gi327409969)  2e-18  Click
5 335451..336224  RNA methyltransferase, TrmH family, group 3; Sgly_0306  N/A  Click
6 336221..336979  RNA polymerase, sigma 30 subunit, SigH; Sgly_0307  N/A  Click
7 337115..337190  tRNA  N/A  Click
8 337201..337284  tRNA  N/A  Click
9 337300..337374  tRNA  N/A  Click
10 complement(337353..338945)  PHAGE_Geobac_E2: putative recombinase ; Sgly_0308; phage(gi148747753)  1e-26  Click
11 complement(338958..340037)  Restriction endonuclease, type I, R subunit/Type III; Sgly_0309  N/A  Click
12 complement(340064..340669)  PHAGE_Staphy_phi2958PVL: probable transcriptional repressor ; Sgly_0310; phage(gi209363558)  4e-24  Click
13 340843..341061  hypothetical protein; Sgly_0311  N/A  Click
14 341096..341266  hypothetical protein; Sgly_0312  N/A  Click
15 341254..341511  hypothetical protein; Sgly_0313  N/A  Click
16 341794..342567  PHAGE_Thalas_BA3: hypothetical protein BA3_0002 ; Sgly_0314; phage(gi160700596)  4e-21  Click
17 342599..343576  PHAGE_Bordet_1: hypothetical protein BIP-1p35 ; Sgly_0315; phage(gi45580780)  1e-52  Click
18 343560..344120  PHAGE_Deftia_14: hypothetical protein ; Sgly_0316; phage(gi282598960)  1e-09  Click
19 344572..345135  PHAGE_Rhizob_3: p096 ; Sgly_0318; phage(gi195546626)  8e-15  Click
20 345152..345427  PHAGE_Bacill_phBC6A51: Transcription state regulatory protein abrB ; Sgly_0319; phage(gi31415778)  2e-12  Click
21 345424..346716  PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp13 ; Sgly_0320; phage(gi56694881)  3e-167  Click
22 346716..347801  PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp14 ; Sgly_0321; phage(gi56694882)  3e-108  Click
23 347827..348276  PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp15 ; Sgly_0322; phage(gi56694883)  3e-31  Click
24 348279..349892  PHAGE_Bacill_BCJA1c: DEAD box family helicase ; Sgly_0323; phage(gi56694884)  0.0  Click
25 349876..350508  PHAGE_Clostr_O: hypothetical protein 39-O_gp07 ; Sgly_0324; phage(gi208429862)  3e-41  Click
26 350501..352747  PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp22 ; Sgly_0325; phage(gi56694890)  0.0  Click
27 352752..352994  hypothetical protein; Sgly_0326  N/A  Click
28 353087..353248  hypothetical protein; Sgly_0327  N/A  Click
29 353238..353630  PHAGE_Bacill_BCJA1c: rus ; Sgly_0328; phage(gi56694892)  1e-43  Click
30 353645..354001  hypothetical protein; Sgly_0329  N/A  Click
31 354025..354318  hypothetical protein; Sgly_0330  N/A  Click
32 354318..354764  hypothetical protein; Sgly_0331  N/A  Click
33 354859..355386  hypothetical protein; Sgly_0332  N/A  Click
34 355498..355596  hypothetical protein; Sgly_0333  N/A  Click
35 355669..356391  PHAGE_Burkho_BcepC6B: putative TerS ; Sgly_0334; phage(gi48697192)  3e-42  Click
36 356384..357706  PHAGE_Clostr_phiCD38_2: terminase large subunit ; Sgly_0335; phage(gi333798109)  6e-17  Click
37 357703..359157  PHAGE_Lister_A118: putative portal protein ; Sgly_0336; phage(gi16798786)  3e-34  Click
38 359159..359443  hypothetical protein; Sgly_0337  N/A  Click
39 359450..361267  PHAGE_Clostr_phiCD38_2: minor capsid protein ; Sgly_0338; phage(gi333798111)  1e-60  Click
40 361646..362248  PHAGE_Clostr_phiCD38_2: scaffolding protein ; Sgly_0339; phage(gi333798113)  3e-12  Click
41 362264..363145  PHAGE_Clostr_CD119: putative capsid protein ; Sgly_0340; phage(gi90592716)  3e-36  Click
42 363161..363403  hypothetical protein; Sgly_0341  N/A  Click
43 363406..363738  PHAGE_Clostr_phiCD38_2: hypothetical protein ; Sgly_0342; phage(gi333798115)  3e-06  Click
44 363738..364130  PHAGE_Clostr_phiCD38_2: hypothetical protein ; Sgly_0343; phage(gi333798116)  1e-10  Click
45 364127..364570  PHAGE_Bacill_IEBH: hypothetical protein IEBH_gp57 ; Sgly_0344; phage(gi197261567)  5e-07  Click
46 364567..364992  PHAGE_Clostr_phiCD38_2: hypothetical protein ; Sgly_0345; phage(gi333798118)  2e-07  Click
47 364997..365479  PHAGE_Clostr_phiCD38_2: hypothetical protein ; Sgly_0346; phage(gi333798119)  8e-12  Click
48 365534..365977  hypothetical protein; Sgly_0347  N/A  Click
49 365979..366554  PHAGE_Clostr_phiCD38_2: hypothetical protein ; Sgly_0348; phage(gi333798121)  4e-28  Click
50 366902..366915  attR    AGGATGGAAAATAA  N/A  Click
51 complement(366919..367326)  PHAGE_Clostr_phiCD38_2: hypothetical protein ; Sgly_0349; phage(gi333798122)  5e-18  Click
52 367518..367922  hypothetical protein; Sgly_0350  N/A  Click
53 368041..368157  hypothetical protein; Sgly_0351  N/A  Click
54 368207..370753  PHAGE_Brocho_BL3: gp17 ; Sgly_0352; phage(gi327409409)  1e-25  Click
55 370771..371115  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0323 ; Sgly_0353; phage(gi41179261)  4e-19  Click
Region 2, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(521023..521457)  PHAGE_Burkho_KL3: gp13 ; Sgly_0518; phage(gi327198058)  8e-07  Click
2 521612..521854  PHAGE_Bacill_Fah: hypothetical protein Fah49 ; Sgly_0519; phage(gi89152509)  1e-07  Click
3 521802..522122  hypothetical protein; Sgly_0520  N/A  Click
4 522365..522583  helix-turn-helix domain protein; Sgly_0521  N/A  Click
5 522597..522908  hypothetical protein; Sgly_0522  N/A  Click
6 523067..525151  PHAGE_Burkho_KS10: putative transposase ; Sgly_0523; phage(gi198449278)  8e-16  Click
7 525151..526143  PHAGE_Burkho_KS10: putative transposition protein ; Sgly_0524; phage(gi198449279)  1e-09  Click
8 526164..526472  hypothetical protein; Sgly_0525  N/A  Click
9 526472..526984  prophage MuMc02, host-nuclease inhibitor protein; Sgly_0526  N/A  Click
10 526996..527466  PHAGE_Burkho_BcepMu: gp02 ; Sgly_0527; phage(gi48696912)  1e-07  Click
11 527441..527827  hypothetical protein; Sgly_0528  N/A  Click
12 527840..529330  PHAGE_Geobac_E2: putative N-acetylmuramoyl-L-alanine amidase ; Sgly_0529; phage(gi148747751)  3e-08  Click
13 529349..529678  PHAGE_Burkho_phiE255: gp32, DNA-binding protein RdgB ; Sgly_0530; phage(gi134288805)  3e-05  Click
14 529799..530233  hypothetical protein; Sgly_0531  N/A  Click
15 530246..530542  hypothetical protein; Sgly_0532  N/A  Click
16 530547..530861  hypothetical protein; Sgly_0533  N/A  Click
17 530861..531421  PHAGE_Burkho_phiE255: gp1 ; Sgly_0534; phage(gi134288828)  5e-08  Click
18 531414..533174  PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp28 ; Sgly_0535; phage(gi215479952)  1e-87  Click
19 533189..534802  PHAGE_Pseudo_MP22: portal protein ; Sgly_0536; phage(gi157834998)  4e-78  Click
20 534795..535538  PHAGE_Burkho_BcepMu: gp30 ; Sgly_0537; phage(gi48696940)  3e-34  Click
21 535676..536731  PHAGE_Pseudo_MP29: protease (I) and scaffold (Z) protein ; Sgly_0538; phage(gi215480007)  5e-24  Click
22 536733..537143  PHAGE_Pseudo_MP29: hypothetical protein PPMP29_gp32 ; Sgly_0539; phage(gi215480008)  4e-21  Click
23 537171..538058  PHAGE_Pseudo_MP29: hypothetical protein PPMP29_gp33 ; Sgly_0540; phage(gi215480009)  8e-72  Click
24 538073..538522  PHAGE_Pseudo_B3: hypothetical protein B3ORF40 ; Sgly_0541; phage(gi56692609)  1e-09  Click
25 538523..539023  PHAGE_Rhodob_RcapMu: virion morphogenesis protein ; Sgly_0542; phage(gi356870876)  8e-10  Click
Region 3, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 745830..746390  PHAGE_Escher_D108: hypothetical protein ; Sgly_0766; phage(gi281199670)  6e-06  Click
2 746383..748038  PHAGE_Staphy_K: hypothetical protein KgORF35 ; Sgly_0767; phage(gi48696425)  2e-14  Click
3 748052..749311  PHAGE_Microc_LMM01: hypothetical protein MaLMM01_gp083 ; Sgly_0768; phage(gi117530254)  3e-22  Click
4 749301..750128  PHAGE_Bacill_L: gp4 ; Sgly_0769; phage(gi216905969)  6e-08  Click
5 750150..751154  PHAGE_Microc_LMM01: hypothetical protein MaLMM01_gp085 ; Sgly_0770; phage(gi117530256)  7e-22  Click
6 751168..751539  hypothetical protein; Sgly_0771  N/A  Click
7 751699..753030  PHAGE_Microc_LMM01: hypothetical protein MaLMM01_gp086 ; Sgly_0772; phage(gi117530257)  3e-18  Click
8 753088..753516  hypothetical protein; Sgly_0773  N/A  Click
9 753513..754109  PHAGE_Burkho_BcepMu: gp31 ; Sgly_0774; phage(gi48696941)  2e-06  Click
10 754111..754584  hypothetical protein; Sgly_0775  N/A  Click
11 754606..756015  PHAGE_Microc_LMM01: putative phage tail sheath protein ; Sgly_0776; phage(gi117530262)  1e-21  Click
12 756028..756297  hypothetical protein; Sgly_0777  N/A  Click
13 756275..756709  PHAGE_Microc_LMM01: hypothetical protein MaLMM01_gp092 ; Sgly_0778; phage(gi117530263)  1e-10  Click
14 756730..757068  hypothetical protein; Sgly_0779  N/A  Click
15 complement(757263..757490)  hypothetical protein; Sgly_0780  N/A  Click
16 757561..759627  PHAGE_Lister_B025: Tmp ; Sgly_0781; phage(gi157325231)  4e-32  Click
17 759650..760219  PHAGE_Lactoc_949: putative tail tape measure protein ; Sgly_0782; phage(gi327197973)  3e-05  Click
18 760231..761295  hypothetical protein; Sgly_0783  N/A  Click
19 761319..761582  putative phage baseplate assembly protein V; Sgly_0784  N/A  Click
20 761594..761995  PHAGE_Bacill_SPO1: gp14.1 ; Sgly_0785; phage(gi209972918)  4e-10  Click
21 761985..763094  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp22 ; Sgly_0786; phage(gi209901259)  1e-31  Click
22 763087..763632  PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp28 ; Sgly_0787; phage(gi90592664)  2e-19  Click
23 763647..765185  PHAGE_Pseudo_1: hypothetical protein PP141_gp45 ; Sgly_0788; phage(gi218148585)  3e-07  Click
24 765185..765517  hypothetical protein; Sgly_0789  N/A  Click
25 765517..765654  PHAGE_Clostr_phiCD6356: hypothetical protein ; Sgly_0790; phage(gi326536868)  5e-06  Click
Region 4, total : 26 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2651183..2651683)  PHAGE_Rhodob_RcapMu: virion morphogenesis protein ; Sgly_2615; phage(gi356870876)  8e-10  Click
2 complement(2651684..2652133)  PHAGE_Pseudo_B3: hypothetical protein B3ORF40 ; Sgly_2616; phage(gi56692609)  1e-09  Click
3 complement(2652148..2653035)  PHAGE_Pseudo_MP29: hypothetical protein PPMP29_gp33 ; Sgly_2617; phage(gi215480009)  8e-72  Click
4 complement(2653063..2653473)  PHAGE_Pseudo_MP29: hypothetical protein PPMP29_gp32 ; Sgly_2618; phage(gi215480008)  4e-21  Click
5 complement(2653475..2654530)  PHAGE_Pseudo_MP29: protease (I) and scaffold (Z) protein ; Sgly_2619; phage(gi215480007)  5e-24  Click
6 complement(2654668..2655411)  PHAGE_Burkho_BcepMu: gp30 ; Sgly_2620; phage(gi48696940)  3e-34  Click
7 complement(2655404..2657017)  PHAGE_Pseudo_MP22: portal protein ; Sgly_2621; phage(gi157834998)  4e-78  Click
8 complement(2657032..2658792)  PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp28 ; Sgly_2622; phage(gi215479952)  1e-87  Click
9 complement(2658785..2659345)  PHAGE_Burkho_phiE255: gp1 ; Sgly_2623; phage(gi134288828)  5e-08  Click
10 complement(2659345..2659659)  hypothetical protein; Sgly_2624  N/A  Click
11 complement(2659664..2659960)  hypothetical protein; Sgly_2625  N/A  Click
12 complement(2659973..2660407)  hypothetical protein; Sgly_2626  N/A  Click
13 2660463..2660579  hypothetical protein; Sgly_2627  N/A  Click
14 complement(2660528..2660857)  PHAGE_Burkho_phiE255: gp32, DNA-binding protein RdgB ; Sgly_2628; phage(gi134288805)  3e-05  Click
15 complement(2660876..2662366)  PHAGE_Geobac_E2: putative N-acetylmuramoyl-L-alanine amidase ; Sgly_2629; phage(gi148747751)  3e-08  Click
16 complement(2662379..2662765)  hypothetical protein; Sgly_2630  N/A  Click
17 complement(2662740..2663210)  PHAGE_Burkho_BcepMu: gp02 ; Sgly_2631; phage(gi48696912)  1e-07  Click
18 complement(2663222..2663734)  prophage MuMc02, host-nuclease inhibitor protein; Sgly_2632  N/A  Click
19 complement(2663734..2664042)  hypothetical protein; Sgly_2633  N/A  Click
20 complement(2664063..2665055)  PHAGE_Burkho_KS10: putative transposition protein ; Sgly_2634; phage(gi198449279)  1e-09  Click
21 complement(2665055..2667139)  PHAGE_Burkho_KS10: putative transposase ; Sgly_2635; phage(gi198449278)  8e-16  Click
22 complement(2667298..2667609)  hypothetical protein; Sgly_2636  N/A  Click
23 complement(2667623..2667841)  helix-turn-helix domain protein; Sgly_2637  N/A  Click
24 complement(2668084..2668365)  hypothetical protein; Sgly_2638  N/A  Click
25 complement(2668352..2668594)  PHAGE_Bacill_Fah: hypothetical protein Fah49 ; Sgly_2639; phage(gi89152509)  1e-07  Click
26 2668749..2669183  PHAGE_Burkho_KL3: gp13 ; Sgly_2640; phage(gi327198058)  8e-07  Click
Region 5, total : 26 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(3005710..3006210)  PHAGE_Rhodob_RcapMu: virion morphogenesis protein ; Sgly_2962; phage(gi356870876)  8e-10  Click
2 complement(3006211..3006660)  PHAGE_Pseudo_B3: hypothetical protein B3ORF40 ; Sgly_2963; phage(gi56692609)  1e-09  Click
3 complement(3006675..3007562)  PHAGE_Pseudo_MP29: hypothetical protein PPMP29_gp33 ; Sgly_2964; phage(gi215480009)  8e-72  Click
4 complement(3007590..3008000)  PHAGE_Pseudo_MP29: hypothetical protein PPMP29_gp32 ; Sgly_2965; phage(gi215480008)  4e-21  Click
5 complement(3008002..3009057)  PHAGE_Pseudo_MP29: protease (I) and scaffold (Z) protein ; Sgly_2966; phage(gi215480007)  5e-24  Click
6 complement(3009195..3009938)  PHAGE_Burkho_BcepMu: gp30 ; Sgly_2967; phage(gi48696940)  3e-34  Click
7 complement(3009931..3011544)  PHAGE_Pseudo_MP22: portal protein ; Sgly_2968; phage(gi157834998)  4e-78  Click
8 complement(3011559..3013319)  PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp28 ; Sgly_2969; phage(gi215479952)  1e-87  Click
9 complement(3013312..3013872)  PHAGE_Burkho_phiE255: gp1 ; Sgly_2970; phage(gi134288828)  5e-08  Click
10 complement(3013872..3014186)  hypothetical protein; Sgly_2971  N/A  Click
11 complement(3014191..3014487)  hypothetical protein; Sgly_2972  N/A  Click
12 complement(3014500..3014934)  hypothetical protein; Sgly_2973  N/A  Click
13 3014990..3015106  hypothetical protein; Sgly_2974  N/A  Click
14 complement(3015055..3015384)  PHAGE_Burkho_phiE255: gp32, DNA-binding protein RdgB ; Sgly_2975; phage(gi134288805)  3e-05  Click
15 complement(3015403..3016893)  PHAGE_Geobac_E2: putative N-acetylmuramoyl-L-alanine amidase ; Sgly_2976; phage(gi148747751)  3e-08  Click
16 complement(3016906..3017292)  hypothetical protein; Sgly_2977  N/A  Click
17 complement(3017267..3017737)  PHAGE_Burkho_BcepMu: gp02 ; Sgly_2978; phage(gi48696912)  1e-07  Click
18 complement(3017749..3018261)  prophage MuMc02, host-nuclease inhibitor protein; Sgly_2979  N/A  Click
19 complement(3018261..3018569)  hypothetical protein; Sgly_2980  N/A  Click
20 complement(3018590..3019582)  PHAGE_Burkho_KS10: putative transposition protein ; Sgly_2981; phage(gi198449279)  1e-09  Click
21 complement(3019582..3021666)  PHAGE_Burkho_KS10: putative transposase ; Sgly_2982; phage(gi198449278)  8e-16  Click
22 complement(3021825..3022136)  hypothetical protein; Sgly_2983  N/A  Click
23 complement(3022150..3022368)  helix-turn-helix domain protein; Sgly_2984  N/A  Click
24 complement(3022611..3022931)  hypothetical protein; Sgly_2985  N/A  Click
25 complement(3022879..3023121)  PHAGE_Bacill_Fah: hypothetical protein Fah49 ; Sgly_2986; phage(gi89152509)  1e-07  Click
26 3023276..3023710  PHAGE_Burkho_KL3: gp13 ; Sgly_2987; phage(gi327198058)  8e-07  Click
Region 6, total : 26 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(3179930..3180430)  PHAGE_Rhodob_RcapMu: virion morphogenesis protein ; Sgly_3137; phage(gi356870876)  8e-10  Click
2 complement(3180431..3180880)  PHAGE_Pseudo_B3: hypothetical protein B3ORF40 ; Sgly_3138; phage(gi56692609)  1e-09  Click
3 complement(3180895..3181782)  PHAGE_Pseudo_MP29: hypothetical protein PPMP29_gp33 ; Sgly_3139; phage(gi215480009)  8e-72  Click
4 complement(3181810..3182220)  PHAGE_Pseudo_MP29: hypothetical protein PPMP29_gp32 ; Sgly_3140; phage(gi215480008)  4e-21  Click
5 complement(3182222..3183277)  PHAGE_Pseudo_MP29: protease (I) and scaffold (Z) protein ; Sgly_3141; phage(gi215480007)  5e-24  Click
6 complement(3183415..3184158)  PHAGE_Burkho_BcepMu: gp30 ; Sgly_3142; phage(gi48696940)  3e-34  Click
7 complement(3184151..3185764)  PHAGE_Pseudo_MP22: portal protein ; Sgly_3143; phage(gi157834998)  4e-78  Click
8 complement(3185779..3187539)  PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp28 ; Sgly_3144; phage(gi215479952)  1e-87  Click
9 complement(3187532..3188092)  PHAGE_Burkho_phiE255: gp1 ; Sgly_3145; phage(gi134288828)  5e-08  Click
10 complement(3188092..3188406)  hypothetical protein; Sgly_3146  N/A  Click
11 complement(3188411..3188707)  hypothetical protein; Sgly_3147  N/A  Click
12 complement(3188720..3189154)  hypothetical protein; Sgly_3148  N/A  Click
13 3189210..3189326  hypothetical protein; Sgly_3149  N/A  Click
14 complement(3189275..3189604)  PHAGE_Burkho_phiE255: gp32, DNA-binding protein RdgB ; Sgly_3150; phage(gi134288805)  3e-05  Click
15 complement(3189623..3191113)  PHAGE_Geobac_E2: putative N-acetylmuramoyl-L-alanine amidase ; Sgly_3151; phage(gi148747751)  3e-08  Click
16 complement(3191126..3191512)  hypothetical protein; Sgly_3152  N/A  Click
17 complement(3191487..3191957)  PHAGE_Burkho_BcepMu: gp02 ; Sgly_3153; phage(gi48696912)  1e-07  Click
18 complement(3191969..3192481)  prophage MuMc02, host-nuclease inhibitor protein; Sgly_3154  N/A  Click
19 complement(3192481..3192789)  hypothetical protein; Sgly_3155  N/A  Click
20 complement(3192810..3193802)  PHAGE_Burkho_KS10: putative transposition protein ; Sgly_3156; phage(gi198449279)  1e-09  Click
21 complement(3193802..3195886)  PHAGE_Burkho_KS10: putative transposase ; Sgly_3157; phage(gi198449278)  8e-16  Click
22 complement(3196045..3196356)  hypothetical protein; Sgly_3158  N/A  Click
23 complement(3196370..3196588)  helix-turn-helix domain protein; Sgly_3159  N/A  Click
24 complement(3196831..3197112)  hypothetical protein; Sgly_3160  N/A  Click
25 complement(3197099..3197341)  PHAGE_Bacill_Fah: hypothetical protein Fah49 ; Sgly_3161; phage(gi89152509)  1e-07  Click
26 3197496..3197930  PHAGE_Burkho_KL3: gp13 ; Sgly_3162; phage(gi327198058)  8e-07  Click