Definition Burkholderia sp. CCGE1001 chromosome chromosome 1, complete sequence.
Accession NC_015136
Length 4,063,449
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2011939..2011950  attL    TCGTTCAGCGCC  N/A  Click
2 2012190..2013863  PHAGE_Bacill_phBC6A51: Site-specific recombinase; BC1001_1744; phage(gi31415812)  6e-11  Click
3 complement(2013907..2014176)  hypothetical protein; BC1001_1745  N/A  Click
4 complement(2014173..2014751)  hypothetical protein; BC1001_1746  N/A  Click
5 complement(2014918..2016177)  hypothetical protein; BC1001_1747  N/A  Click
6 complement(2016178..2016399)  hypothetical protein; BC1001_1748  N/A  Click
7 complement(2016463..2016705)  hypothetical protein; BC1001_1749  N/A  Click
8 complement(2016702..2016875)  hypothetical protein; BC1001_1750  N/A  Click
9 complement(2017379..2017642)  hypothetical protein; BC1001_1751  N/A  Click
10 complement(2017656..2018474)  hypothetical protein; BC1001_1752  N/A  Click
11 complement(2018786..2018998)  hypothetical protein; BC1001_1753  N/A  Click
12 2019115..2019504  PHAGE_Aeromo_Aes012: putative XRE family plasmid maintenance system antidote protein; BC1001_1754; phage(gi472438177)  7e-11  Click
13 2019514..2019903  hypothetical protein; BC1001_1755  N/A  Click
14 complement(2020585..2021307)  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp04; BC1001_1757; phage(gi145708078)  8e-32  Click
15 complement(2021315..2021830)  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp03; BC1001_1758; phage(gi145708077)  6e-20  Click
16 complement(2021799..2022266)  hypothetical protein; BC1001_1759  N/A  Click
17 complement(2022259..2022750)  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp02; BC1001_1760; phage(gi145708076)  3e-23  Click
18 complement(2022753..2023169)  PHAGE_Ralsto_phiRSA1: putative bacteriophage gp29 protein; BC1001_1761; phage(gi145708075)  2e-17  Click
19 complement(2023297..2024187)  hypothetical protein; BC1001_1762  N/A  Click
20 2024477..2024677  hypothetical protein; BC1001_1763  N/A  Click
21 2024715..2026673  PHAGE_Burkho_BcepIL02: putative DNA ligase; BC1001_1764; phage(gi238801659)  1e-24  Click
22 2026892..2027866  PHAGE_Salmon_SSU5: hypothetical protein; BC1001_1765; phage(gi410491447)  3e-05  Click
23 2028080..2029048  PHAGE_Salmon_7_11: hypothetical protein; BC1001_1766; phage(gi345461254)  5e-10  Click
24 2029105..2029803  PHAGE_Salmon_7_11: hypothetical protein; BC1001_1767; phage(gi345461254)  3e-15  Click
25 2043093..2043104  attR    TCGTTCAGCGCC  N/A  Click
Region 2, total : 40 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3895601..3895641  attL    GCGCCCGGCTGGGATCGAACCAGCAACCCCTGCCTTCGGAG  N/A  Click
2 complement(3901273..3902325)  PHAGE_Burkho_phiE202: gp5, phage portal protein, pbsx family; BC1001_3453; phage(gi134288763)  2e-129  Click
3 complement(3902322..3904088)  PHAGE_Burkho_phiE202: gp4, phage terminase, ATPase subunit; BC1001_3454; phage(gi134288784)  0.0  Click
4 3904243..3905292  PHAGE_Burkho_phiE202: gp3, phage capsid scaffolding protein (GPO); BC1001_3455; phage(gi134288755)  9e-65  Click
5 3905348..3906367  PHAGE_Burkho_phiE202: gp2, phage major capsid protein, P2 family; BC1001_3456; phage(gi134288740)  2e-108  Click
6 3906370..3907089  PHAGE_Burkho_phiE202: gp1, phage terminase, endonuclease subunit; BC1001_3457; phage(gi134288748)  1e-65  Click
7 3907193..3907675  PHAGE_Burkho_phiE202: gp48, phage head completion protein (GPL); BC1001_3458; phage(gi134288751)  1e-50  Click
8 3907675..3907881  PHAGE_Burkho_phiE202: gp46, phage Tail Protein X; BC1001_3459; phage(gi134288782)  7e-19  Click
9 3907898..3908242  PHAGE_Burkho_phiE202: gp45, putative bacteriophage membrane protein; BC1001_3460; phage(gi134288749)  2e-41  Click
10 3908248..3908514  PHAGE_Burkho_phiE202: gp44, putative bacteriophage membrane protein; BC1001_3461; phage(gi134288752)  8e-28  Click
11 3908517..3909323  PHAGE_Burkho_phiE202: gp43, bacteriophage-acquired protein; BC1001_3462; phage(gi134288769)  1e-96  Click
12 3909320..3909742  PHAGE_Burkho_phiE202: gp40, P2 phage tail completion protein R (GpR); BC1001_3463; phage(gi134288754)  5e-39  Click
13 3909739..3910206  PHAGE_Burkho_phiE202: gp39, phage virion morphogenesis protein; BC1001_3464; phage(gi134288746)  1e-41  Click
14 3910226..3910978  PHAGE_Burkho_phiE202: gp36, gpV; BC1001_3465; phage(gi134288750)  1e-67  Click
15 3910975..3911346  PHAGE_Burkho_phiE202: gp35, phage baseplate assembly protein; BC1001_3466; phage(gi134288768)  1e-32  Click
16 3911343..3912254  PROPHAGE_Salmon_Ty2: phage baseplate assembly protein; BC1001_3467; phage(gi29143752)  1e-76  Click
17 3912247..3912810  PHAGE_Burkho_phiE255: gp25, tail fiber; BC1001_3468; phage(gi134288819)  7e-37  Click
18 3912810..3913868  PHAGE_Burkho_phiE255: gp26; BC1001_3469; phage(gi134288791)  7e-68  Click
19 3913871..3914314  PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp23; BC1001_3470; phage(gi17313240)  4e-13  Click
20 3914355..3915530  PHAGE_Burkho_phiE202: gp30, phage tail sheath protein; BC1001_3471; phage(gi134288772)  1e-168  Click
21 3915570..3916079  PHAGE_Burkho_phiE202: gp29, phage major tail tube protein; BC1001_3472; phage(gi134288759)  6e-66  Click
22 3916164..3916550  PHAGE_Burkho_phiE202: gp28, phage tail protein E; BC1001_3473; phage(gi134288780)  2e-30  Click
23 3916559..3916672  PHAGE_Burkho_phiE202: gp27, phage tail protein, P2 GpE family; BC1001_3474; phage(gi134288776)  2e-10  Click
24 3916675..3919542  PHAGE_Burkho_phiE202: gp26, bacteriophage membrane protein; BC1001_3475; phage(gi134288775)  0.0  Click
25 3919563..3920273  PHAGE_Burkho_phiE202: gp25, fels-2 prophage protein; BC1001_3476; phage(gi134288777)  2e-43  Click
26 3920270..3921337  PHAGE_Burkho_phiE202: gp24, fels-2 prophage protein; BC1001_3477; phage(gi134288767)  3e-144  Click
27 3921424..3921903  hypothetical protein; BC1001_3478  N/A  Click
28 complement(3922221..3923129)  PHAGE_Burkho_phiE202: gp23, hypothetical protein; BC1001_3479; phage(gi134288762)  1e-104  Click
29 complement(3923167..3923895)  PHAGE_Burkho_phiE202: gp22, putative phage-encoded membrane protein; BC1001_3480; phage(gi134288741)  3e-72  Click
30 complement(3923950..3924381)  PHAGE_Burkho_phiE202: gp21; BC1001_3481; phage(gi134288765)  1e-53  Click
31 3924463..3924699  PHAGE_Burkho_phiE202: gp20, conserved hypothetical protein; BC1001_3482; phage(gi134288764)  4e-27  Click
32 3924703..3924999  PHAGE_Burkho_KS5: gp9; BC1001_3483; phage(gi327198007)  9e-40  Click
33 3924987..3925235  PHAGE_Burkho_phiE202: gp19, conserved hypothetical protein; BC1001_3484; phage(gi134288771)  7e-40  Click
34 3925319..3925531  PHAGE_Burkho_phiE202: gp18, conserved hypothetical protein; BC1001_3485; phage(gi134288761)  9e-18  Click
35 3925536..3925739  PHAGE_Burkho_phiE202: gp17, conserved hypothetical protein; BC1001_3486; phage(gi134288774)  4e-18  Click
36 3925784..3925978  PHAGE_Burkho_phiE202: gp16, conserved hypothetical protein; BC1001_3487; phage(gi134288756)  7e-13  Click
37 3925983..3926363  PHAGE_Burkho_phiE202: gp13, conserved hypothetical protein; BC1001_3488; phage(gi134288783)  3e-36  Click
38 3926360..3926623  PHAGE_Burkho_phiE202: gp12, hypothetical protein; BC1001_3489; phage(gi134288787)  3e-23  Click
39 3926628..3929420  PHAGE_Burkho_phiE202: gp11, conserved hypothetical protein; BC1001_3490; phage(gi134288779)  0.0  Click
40 3930288..3931364  PHAGE_Burkho_phiE202: gp10, site-specific recombinase, phage integrase family; BC1001_3491; phage(gi134288747)  8e-80  Click
41 complement(3931430..3931505)  tRNA  N/A  Click
42 3931434..3931474  attR    GCGCCCGGCTGGGATCGAACCAGCAACCCCTGCCTTCGGAG  N/A  Click
43 3931836..3932741  PHAGE_Papiin_2: envelope glycoprotein G; BC1001_3492; phage(gi83722632)  1e-05  Click