Definition Pantoea sp. At-9b plasmid pPAT9B01, complete sequence.
Accession NC_014838
Length 793,953
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 61 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(223604..224659)  PHAGE_Synech_S_SM2: zinc-containing alcohol dehydrogenase superfamily protein; Pat9b_5352; phage(gi326781942)  2e-18  Click
2 224869..224880  attL    AATTCACTTGAT  N/A  Click
3 complement(224961..226103)  PHAGE_Entero_mEp235: integrase; Pat9b_5353; phage(gi428781836)  4e-55  Click
4 complement(226078..226341)  hypothetical protein; Pat9b_5354  N/A  Click
5 complement(226395..226739)  PHAGE_Entero_epsilon15: hypothetical protein epsilon15p49; Pat9b_5355; phage(gi30387428)  5e-38  Click
6 complement(226732..227124)  hypothetical protein; Pat9b_5356  N/A  Click
7 complement(227117..227818)  PHAGE_Entero_P1: PmgT; Pat9b_5357; phage(gi46401715)  2e-34  Click
8 complement(227811..228014)  hypothetical protein; Pat9b_5358  N/A  Click
9 complement(228014..228454)  hypothetical protein; Pat9b_5359  N/A  Click
10 complement(228451..228894)  PHAGE_Salmon_SPN1S: hypothetical protein; Pat9b_5360; phage(gi374531239)  7e-05  Click
11 complement(228881..229060)  PHAGE_Salmon_SPN1S: hypothetical protein; Pat9b_5361; phage(gi374531225)  2e-05  Click
12 complement(229472..229867)  hypothetical protein; Pat9b_5362  N/A  Click
13 complement(230050..230172)  hypothetical protein; Pat9b_5363  N/A  Click
14 complement(230333..231025)  PHAGE_Entero_c_1: prophage repressor; Pat9b_5364; phage(gi428781782)  4e-57  Click
15 231138..231368  PHAGE_Entero_mEp237: prophage anti-repressor; Pat9b_5365; phage(gi435439305)  1e-13  Click
16 231400..231936  PHAGE_Entero_mEp390: hypothetical protein; Pat9b_5366; phage(gi428782704)  8e-27  Click
17 231936..232373  hypothetical protein; Pat9b_5367  N/A  Click
18 232383..233264  PHAGE_Entero_mEp390: hypothetical protein; Pat9b_5368; phage(gi428782706)  1e-35  Click
19 233261..233674  hypothetical protein; Pat9b_5369  N/A  Click
20 233790..234617  PHAGE_Entero_mEp390: hypothetical protein; Pat9b_5370; phage(gi428782698)  4e-24  Click
21 234617..234766  hypothetical protein; Pat9b_5371  N/A  Click
22 234763..235389  PHAGE_Cronob_phiES15: putative adenine-specific DNA methyltransferase; Pat9b_5372; phage(gi401817568)  1e-87  Click
23 235386..235517  hypothetical protein; Pat9b_5373  N/A  Click
24 235514..235879  PHAGE_Entero_mEp390: holliday-junction resolvase RusA; Pat9b_5374; phage(gi428782708)  2e-35  Click
25 235876..236892  PHAGE_Entero_mEp390: hypothetical protein; Pat9b_5375; phage(gi428782709)  2e-97  Click
26 236913..237341  PHAGE_Entero_mEp390: late gene regulator Q; Pat9b_5376; phage(gi428782710)  5e-43  Click
27 237409..237702  hypothetical protein; Pat9b_5377  N/A  Click
28 237894..238232  PHAGE_Entero_SfV: holin; Pat9b_5378; phage(gi19549036)  1e-32  Click
29 238235..238777  PHAGE_Erwini_vB_EamP_S6: endolysin; Pat9b_5379; phage(gi422935930)  1e-65  Click
30 238774..238980  PHAGE_Pseudo_vB_Pae_Kakheti25: holin; Pat9b_5380; phage(gi388542661)  2e-09  Click
31 239188..239517  PHAGE_Bacter_2: hypothetical protein APSE214; Pat9b_5381; phage(gi212499719)  2e-20  Click
32 239514..239756  hypothetical protein; Pat9b_5382  N/A  Click
33 239860..240081  hypothetical protein; Pat9b_5383  N/A  Click
34 complement(240242..240499)  hypothetical protein; Pat9b_5384  N/A  Click
35 240892..241287  hypothetical protein; Pat9b_5385  N/A  Click
36 241440..241790  PHAGE_Entero_mEp235: putative HNH endonuclease; Pat9b_5386; phage(gi428781871)  1e-51  Click
37 241948..242445  PHAGE_Entero_mEp235: terminase small subunit; Pat9b_5387; phage(gi428781811)  2e-72  Click
38 242445..244202  PHAGE_Entero_mEp235: terminase large subunit; Pat9b_5388; phage(gi428781812)  0.0  Click
39 244212..244397  PHAGE_Entero_phiP27: putative integral membrane protein; Pat9b_5389; phage(gi18249901)  2e-18  Click
40 244397..245626  PHAGE_Salmon_ST64B: Portal Protein; Pat9b_5390; phage(gi23505449)  0.0  Click
41 245613..246266  PHAGE_Entero_phiP27: putative prohead protease; Pat9b_5391; phage(gi18249903)  3e-102  Click
42 246280..247491  PHAGE_Entero_phiP27: putative major capsid protein; Pat9b_5392; phage(gi18249904)  0.0  Click
43 247532..247825  PHAGE_Staphy_Twort: ORF029; Pat9b_5393; phage(gi66391284)  4e-09  Click
44 247855..248160  PHAGE_Entero_mEp235: head-tail connector II; Pat9b_5394; phage(gi428781817)  1e-09  Click
45 248172..248510  PHAGE_Entero_mEp234: head-tail connector II; Pat9b_5395; phage(gi428782261)  3e-32  Click
46 248507..248953  PHAGE_Entero_HK446: hypothetical protein; Pat9b_5396; phage(gi428782201)  8e-58  Click
47 248950..249297  PHAGE_Entero_mEp390: hypothetical protein; Pat9b_5397; phage(gi428782673)  1e-29  Click
48 249353..249820  PHAGE_Entero_mEp390: major tail subunit; Pat9b_5398; phage(gi428782674)  2e-66  Click
49 249873..250277  PHAGE_Entero_mEp390: tail assembly chaperone; Pat9b_5399; phage(gi428782675)  4e-38  Click
50 250301..250564  PHAGE_Entero_mEp390: hypothetical protein; Pat9b_5400; phage(gi428782676)  9e-30  Click
51 250633..250974  PHAGE_Entero_ES18: gp20; Pat9b_5401; phage(gi62362233)  1e-06  Click
52 251014..254280  PHAGE_Entero_mEp390: tail length tape measure protein; Pat9b_5402; phage(gi428782677)  0.0  Click
53 254322..254663  PHAGE_Entero_mEp213: minor tail protein; Pat9b_5403; phage(gi428782603)  1e-32  Click
54 254710..255447  PHAGE_Entero_mEp213: minor tail protein; Pat9b_5404; phage(gi428782604)  3e-121  Click
55 255450..256169  PHAGE_Entero_mEp213: tail assembly protein; Pat9b_5405; phage(gi428782605)  1e-103  Click
56 256162..256785  PHAGE_Entero_mEp213: tail assembly protein; Pat9b_5406; phage(gi428782606)  4e-76  Click
57 256840..260028  PHAGE_Entero_mEp213: central tail fiber; Pat9b_5407; phage(gi428782607)  0.0  Click
58 260028..260984  hypothetical protein; Pat9b_5408  N/A  Click
59 complement(260973..261191)  PHAGE_Escher_HK75: cor protein; Pat9b_5409; phage(gi356870700)  2e-06  Click
60 261353..262513  PHAGE_Entero_HK225: tail fiber; Pat9b_5410; phage(gi428782401)  7e-35  Click
61 complement(262549..262812)  hypothetical protein; Pat9b_5411  N/A  Click
62 262876..262887  attR    AATTCACTTGAT  N/A  Click
63 262946..263185  PHAGE_Cronob_phiES15: hypothetical protein; Pat9b_5412; phage(gi401817614)  5e-16  Click