Definition Burkholderia rhizoxinica HKI 454 chromosome, complete genome.
Accession NC_014722
Length 2,755,309
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 48 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 165500..165511  attL    GGTGTAGCTAAA  N/A  Click
2 complement(165544..166053)  PHAGE_Ralsto_phiRSA1: site-specific recombinase; RBRH_00850; phage(gi145708124)  2e-17  Click
3 166222..166362  hypothetical protein; RBRH_00851  N/A  Click
4 166343..166678  transcriptional regulator; RBRH_00852  N/A  Click
5 166936..167238  hypothetical protein; RBRH_00853  N/A  Click
6 167235..167744  acetyltransferase; RBRH_00854  N/A  Click
7 167858..168055  transposase; RBRH_00855  N/A  Click
8 complement(168278..169501)  PHAGE_Burkho_phiE202: gp10, site-specific recombinase, phage integrase family; RBRH_00856; phage(gi134288747)  4e-79  Click
9 complement(169770..170207)  hypothetical protein; RBRH_00857  N/A  Click
10 complement(170204..172999)  PHAGE_Burkho_phiE202: gp11, conserved hypothetical protein; RBRH_00858; phage(gi134288779)  0.0  Click
11 complement(173621..173860)  PHAGE_Burkho_phiE202: gp18, conserved hypothetical protein; RBRH_04064; phage(gi134288761)  1e-19  Click
12 complement(173914..174168)  PHAGE_Burkho_phiE202: gp19, conserved hypothetical protein; RBRH_00860; phage(gi134288771)  2e-37  Click
13 174132..174230  hypothetical protein; RBRH_00861  N/A  Click
14 complement(174214..174315)  hypothetical protein; RBRH_04063  N/A  Click
15 complement(174257..174472)  PHAGE_Burkho_KL3: gp12; RBRH_00862; phage(gi327198057)  7e-16  Click
16 174522..175064  PHAGE_Burkho_phiE202: gp21; RBRH_00863; phage(gi134288765)  4e-16  Click
17 175316..175693  hypothetical protein; RBRH_00864  N/A  Click
18 complement(176002..177027)  PHAGE_Burkho_phiE202: gp24, fels-2 prophage protein; RBRH_00865; phage(gi134288767)  9e-137  Click
19 complement(177024..177461)  PHAGE_Burkho_phiE202: gp25, fels-2 prophage protein; RBRH_00866; phage(gi134288777)  2e-43  Click
20 complement(177480..180455)  PHAGE_Burkho_phiE202: gp26, bacteriophage membrane protein; RBRH_00867; phage(gi134288775)  0.0  Click
21 complement(180458..180571)  PHAGE_Burkho_phiE202: gp27, phage tail protein, P2 GpE family; RBRH_00868; phage(gi134288776)  7e-10  Click
22 complement(180580..181011)  PHAGE_Burkho_phiE202: gp28, phage tail protein E; RBRH_00869; phage(gi134288780)  2e-31  Click
23 complement(181017..181526)  PHAGE_Burkho_phiE202: gp29, phage major tail tube protein; RBRH_00870; phage(gi134288759)  2e-65  Click
24 complement(181542..182714)  PHAGE_Burkho_phiE202: gp30, phage tail sheath protein; RBRH_00871; phage(gi134288772)  7e-154  Click
25 complement(182772..183533)  PHAGE_Burkho_KS5: gp22; RBRH_00872; phage(gi327198020)  9e-63  Click
26 complement(183555..185471)  PHAGE_Burkho_KS14: gp18; RBRH_00873; phage(gi327198287)  1e-80  Click
27 complement(185474..186067)  PHAGE_Burkho_phiE202: gp33, phage tail protein I; RBRH_00874; phage(gi134288744)  9e-70  Click
28 complement(186009..186914)  PHAGE_Burkho_phiE202: gp34, phage baseplate assembly protein; RBRH_00875; phage(gi134288785)  2e-123  Click
29 complement(186911..187282)  PHAGE_Burkho_phiE202: gp35, phage baseplate assembly protein; RBRH_00876; phage(gi134288768)  2e-38  Click
30 complement(187279..188043)  PHAGE_Burkho_phiE202: gp36, gpV; RBRH_00877; phage(gi134288750)  5e-69  Click
31 188020..188232  hypothetical protein; RBRH_00878  N/A  Click
32 188308..188814  PHAGE_Burkho_phiE202: gp37, DNA methylase; RBRH_00879; phage(gi134288786)  4e-69  Click
33 complement(188966..190183)  hypothetical protein; RBRH_00880  N/A  Click
34 complement(190251..191129)  PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; RBRH_00881; phage(gi17546158)  2e-76  Click
35 complement(191126..191392)  PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; RBRH_00882; phage(gi17546157)  4e-32  Click
36 complement(191422..192684)  hypothetical protein; RBRH_00883  N/A  Click
37 complement(192872..193327)  PHAGE_Burkho_phiE202: gp39, phage virion morphogenesis protein; RBRH_00884; phage(gi134288746)  7e-32  Click
38 complement(193337..193486)  PHAGE_Burkho_phiE202: gp40, P2 phage tail completion protein R (GpR); RBRH_00885; phage(gi134288754)  3e-05  Click
39 complement(193535..193699)  PHAGE_Burkho_phiE202: gp40, P2 phage tail completion protein R (GpR); RBRH_00886; phage(gi134288754)  4e-11  Click
40 complement(193772..193903)  PHAGE_Burkho_phiE202: gp41, LysC; RBRH_00887; phage(gi134288745)  3e-10  Click
41 complement(193872..194312)  PHAGE_Burkho_phiE202: gp42, protein LysB; RBRH_00888; phage(gi134288770)  8e-33  Click
42 complement(194337..195143)  PHAGE_Burkho_phiE202: gp43, bacteriophage-acquired protein; RBRH_00889; phage(gi134288769)  6e-89  Click
43 complement(195140..195445)  PHAGE_Burkho_phiE202: gp44, putative bacteriophage membrane protein; RBRH_00890; phage(gi134288752)  2e-14  Click
44 complement(195420..195785)  PHAGE_Burkho_phiE202: gp45, putative bacteriophage membrane protein; RBRH_00891; phage(gi134288749)  1e-38  Click
45 complement(195782..196054)  PHAGE_Burkho_phiE202: gp46, phage Tail Protein X; RBRH_00892; phage(gi134288782)  1e-24  Click
46 complement(196701..197231)  hypothetical protein; RBRH_00893  N/A  Click
47 complement(197373..197726)  Fic family protein; RBRH_00894  N/A  Click
48 complement(197908..198129)  hypothetical protein; RBRH_00895  N/A  Click
49 198188..198715  PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; RBRH_00897; phage(gi16131377)  9e-23  Click
50 200140..200151  attR    GGTGTAGCTAAA  N/A  Click
Region 2, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 779071..779088  attL    GCTCTACCGCTGAGCTAA  N/A  Click
2 complement(786436..786882)  PHAGE_Ralsto_RSS0: hypothetical protein; RBRH_01119; phage(gi423262464)  4e-49  Click
3 complement(787153..787560)  PHAGE_Pseudo_MP42: c repressor; RBRH_01118; phage(gi399528580)  2e-17  Click
4 787574..787705  hypothetical protein; RBRH_04016  N/A  Click
5 787717..787980  hypothetical protein; RBRH_01117  N/A  Click
6 complement(787977..788072)  PHAGE_Pseudo_PAJU2: putative integrase; RBRH_01116; phage(gi209552450)  5e-06  Click
7 complement(788089..788976)  PHAGE_Pseudo_PAJU2: putative integrase; RBRH_01115; phage(gi209552450)  3e-32  Click
8 complement(789060..789134)  tRNA  N/A  Click
9 789111..789128  attR    GCTCTACCGCTGAGCTAA  N/A  Click
10 complement(789311..790054)  PHAGE_Salmon_SSU5: putative exonuclease; RBRH_01114; phage(gi410491496)  1e-10  Click
11 complement(790107..790556)  PHAGE_Salmon_SSU5: putative ribonuclease H; RBRH_01113; phage(gi410491500)  3e-42  Click
12 complement(790604..791416)  methyltransferase; RBRH_01112  N/A  Click
13 791438..792280  Hydroxyacylglutathione hydrolase; RBRH_01111  N/A  Click
14 792501..794225  PHAGE_Pseudo_1: internal virion protein D; RBRH_01110; phage(gi29366735)  8e-06  Click
Region 3, total : 35 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 864721..866109  PHAGE_Acinet_Bphi_B1251: hypothetical protein; RBRH_01213; phage(gi423262000)  1e-155  Click
2 865958..867628  PHAGE_Pseudo_NH_4: putative minor head protein; RBRH_01212; phage(gi418488465)  1e-134  Click
3 867597..867743  hypothetical protein; RBRH_04005  N/A  Click
4 867706..868479  PHAGE_Burkho_BcepB1A: gp27; RBRH_01211; phage(gi48697516)  6e-41  Click
5 868476..869780  PHAGE_Burkho_BcepB1A: gp26; RBRH_01210; phage(gi48697515)  1e-65  Click
6 869728..870270  PHAGE_Burkho_BcepB1A: gp24; RBRH_01209; phage(gi48697514)  5e-22  Click
7 870281..871372  PHAGE_Pseudo_JG024: putative major strucutral protein; RBRH_01208; phage(gi418486920)  9e-101  Click
8 871385..871741  PHAGE_Burkho_BcepB1A: gp22; RBRH_01207; phage(gi48697512)  5e-16  Click
9 871738..872184  PHAGE_Pseudo_NH_4: putative structural protein; RBRH_01206; phage(gi418488473)  3e-26  Click
10 872232..872729  PHAGE_Burkho_BcepB1A: gp20; RBRH_01205; phage(gi48697510)  2e-22  Click
11 872726..873085  PHAGE_Burkho_BcepB1A: gp19; RBRH_01204; phage(gi48697509)  4e-19  Click
12 873070..873621  PHAGE_Burkho_BcepB1A: gp18; RBRH_01203; phage(gi48697508)  6e-20  Click
13 873631..875124  PHAGE_Burkho_BcepF1: hypothetical protein BcepF1.111; RBRH_01202; phage(gi126011045)  8e-106  Click
14 875143..875589  PHAGE_Burkho_BcepB1A: gp16; RBRH_01201; phage(gi48697506)  9e-38  Click
15 875586..876029  PHAGE_Burkho_BcepB1A: gp15 E; RBRH_01200; phage(gi48697505)  3e-34  Click
16 875957..876136  PHAGE_Burkho_BcepB1A: gp15' E'; RBRH_04004; phage(gi72257066)  6e-10  Click
17 876133..877836  PHAGE_Burkho_BcepB1A: gp14 T; RBRH_01199; phage(gi72257065)  2e-56  Click
18 877833..878360  PHAGE_Burkho_BcepB1A: gp13; RBRH_01198; phage(gi48697561)  9e-31  Click
19 878387..878701  PHAGE_Burkho_BcepB1A: gp12; RBRH_01197; phage(gi48697560)  6e-18  Click
20 878698..879537  PHAGE_Burkho_BcepB1A: gp11; RBRH_01196; phage(gi48697559)  3e-56  Click
21 879537..880178  PHAGE_Burkho_BcepB1A: gp10 V; RBRH_01195; phage(gi48697558)  1e-48  Click
22 880208..880558  PHAGE_Burkho_BcepB1A: gp09; RBRH_01194; phage(gi48697557)  2e-16  Click
23 880551..881750  PHAGE_Burkho_BcepB1A: gp08 W; RBRH_01193; phage(gi48697556)  4e-91  Click
24 881993..882649  PHAGE_Burkho_BcepB1A: gp07; RBRH_01192; phage(gi48697555)  4e-59  Click
25 882653..883687  PHAGE_Burkho_DC1: tail fiber protein; RBRH_01191; phage(gi401723072)  9e-49  Click
26 complement(883718..884503)  hypothetical protein; RBRH_01190  N/A  Click
27 884597..885022  PHAGE_Aeromo_phiAS5: baseplate hub subunit and tail lysozyme; RBRH_01189; phage(gi310722799)  1e-13  Click
28 885019..885162  hypothetical protein; RBRH_01188  N/A  Click
29 885498..886229  PHAGE_Microm_12T: hypothetical protein; RBRH_01187; phage(gi472342811)  5e-06  Click
30 complement(886242..886364)  hypothetical protein; RBRH_04003  N/A  Click
31 886373..886852  PHAGE_Aeromo_phiAS5: baseplate hub subunit and tail lysozyme; RBRH_01186; phage(gi310722799)  2e-12  Click
32 886849..887163  PHAGE_Burkho_KS9: holin gp22; RBRH_01185; phage(gi255033753)  4e-16  Click
33 complement(887212..887508)  transcriptional repressor; RBRH_01184  N/A  Click
34 complement(887502..887822)  VIRULENCE GENE REPRESSOR RSAL; RBRH_01183  N/A  Click
35 887836..888432  PHAGE_Burkho_phiE125: hypothetical protein phiE125p26; RBRH_01182; phage(gi17975187)  7e-40  Click
Region 4, total : 10 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1183100..1183783  PHAGE_Bacill_36: baseplate hub protein; RBRH_02891; phage(gi156564128)  3e-12  Click
2 complement(1183816..1184904)  PHAGE_Acanth_mimivirus: putative patatin-like phospholipase; RBRH_02892; phage(gi311977833)  1e-10  Click
3 complement(1184831..1185034)  hypothetical protein; RBRH_04200  N/A  Click
4 1185025..1186371  glutamyl-tRNA synthetase; RBRH_02893  N/A  Click
5 1186444..1186520  tRNA  N/A  Click
6 1186445..1186520  tRNA  N/A  Click
7 complement(1186586..1186819)  transposase; RBRH_02894  N/A  Click
8 complement(1186722..1187141)  PHAGE_Stx2_c_1717: transposase; RBRH_02895; phage(gi209447152)  2e-24  Click
9 complement(1187364..1188137)  PROPHAGE_Escher_CFT073: transposase/IS protein; RBRH_04199; phage(gi26248359)  1e-83  Click
10 complement(1188134..1189210)  PROPHAGE_Escher_CFT073: transposase; RBRH_03781; phage(gi26248360)  4e-73  Click
11 1189243..1189371  PHAGE_Stx2_c_1717: transposase; RBRH_03780; phage(gi209447179)  3e-05  Click
12 1189396..1189500  transposase; RBRH_03779  N/A  Click
13 complement(1189563..1191362)  PHAGE_Bacill_SPBc2: ABC transporter; RBRH_03778; phage(gi9630145)  3e-20  Click
Region 5, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1703667..1704935)  PHAGE_Bacill_BCD7: putative tail sheath protein; RBRH_00120; phage(gi422936048)  1e-19  Click
2 complement(1705175..1706506)  PHAGE_Bacill_BCD7: putative tail sheath protein; RBRH_00121; phage(gi422936048)  7e-29  Click
3 complement(1706542..1706991)  PHAGE_Bacill_BCD7: putative tail tube protein 2; RBRH_00122; phage(gi422936047)  4e-06  Click
4 complement(1707527..1707979)  PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; RBRH_00123; phage(gi17546157)  3e-08  Click
5 complement(1708096..1708212)  hypothetical protein; RBRH_04152  N/A  Click
6 1708381..1708494  hypothetical protein; RBRH_00124  N/A  Click
7 1708469..1708921  transposase; RBRH_00125  N/A  Click
8 1708819..1709205  PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; RBRH_00126; phage(gi17546158)  2e-17  Click
9 1710005..1710127  PROPHAGE_Xantho_306: ISxac2 transposase; RBRH_00127; phage(gi21244663)  2e-07  Click
10 1710146..1710289  PROPHAGE_Xantho_306: ISxac2 transposase; RBRH_00128; phage(gi21244663)  2e-05  Click
11 1710477..1710575  PROPHAGE_Xantho_306: ISxac2 transposase; RBRH_00129; phage(gi21244662)  1e-05  Click
12 1710548..1710823  PROPHAGE_Xantho_306: ISxcd1 transposase; RBRH_00130; phage(gi21242257)  4e-29  Click
13 complement(1710940..1711110)  hypothetical protein; RBRH_00131  N/A  Click
14 complement(1711213..1711506)  PROPHAGE_Pseudo_KT2440: transposase, putative; RBRH_00132; phage(gi26991145)  3e-08  Click
15 complement(1711510..1714182)  multimodular transpeptidase-transglycosylase PBP 1A; RBRH_00133  N/A  Click
16 1714129..1715037  PHAGE_Clostr_phiCD6356: putative phage tail tape measure protein; RBRH_00134; phage(gi326536862)  3e-06  Click
Region 6, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2408685..2410961)  PHAGE_Acinet_Acj61: gp5 baseplate hub subunit and tail lysozyme; RBRH_02040; phage(gi311992909)  1e-04  Click
2 complement(2411034..2411672)  hypothetical protein; RBRH_02041  N/A  Click
3 complement(2411703..2411888)  hypothetical protein; RBRH_02042  N/A  Click
4 complement(2411867..2412337)  hypothetical protein; RBRH_02043  N/A  Click
5 complement(2412334..2412675)  PHAGE_Bacill_BCD7: putative tail sheath protein; RBRH_04096; phage(gi422936048)  6e-06  Click
6 complement(2412672..2413661)  tail sheath protein Gp18; RBRH_02044  N/A  Click
7 complement(2413906..2415576)  PHAGE_Bacill_BCD7: putative tail sheath protein; RBRH_02045; phage(gi422936048)  5e-21  Click
8 complement(2415648..2416901)  PHAGE_Bacill_BCD7: putative tail sheath protein; RBRH_02047; phage(gi422936048)  3e-31  Click
9 complement(2416937..2417386)  PHAGE_Bacill_BCD7: putative tail tube protein 2; RBRH_02048; phage(gi422936047)  3e-05  Click
10 complement(2417528..2417866)  hypothetical protein; RBRH_02049  N/A  Click
11 complement(2417956..2418417)  PROPHAGE_Xantho_306: ISxac2 transposase; RBRH_02050; phage(gi21244663)  1e-09  Click