| Definition | Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome. |
|---|---|
| Accession | NC_014664 |
| Length | 4,014,469 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 25 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1597932..1597943 | attL CATATTTGGTGA | N/A | Click |
| 2 | complement(1605389..1606570) | PHAGE_Pseudo_D3: integrase; Rvan_1464; phage(gi9635596) | 5e-18 | Click |
| 3 | 1606695..1606762 | tRNA | N/A | Click |
| 4 | complement(1606963..1607367) | hypothetical protein; Rvan_1465 | N/A | Click |
| 5 | complement(1607351..1607635) | hypothetical protein; Rvan_1466 | N/A | Click |
| 6 | complement(1607632..1608102) | hypothetical protein; Rvan_1467 | N/A | Click |
| 7 | complement(1608099..1608608) | PHAGE_Mycoba_TM4: hypothetical protein TM4_gp92; Rvan_1468; phage(gi18496975) | 1e-06 | Click |
| 8 | complement(1608612..1608815) | hypothetical protein; Rvan_1469 | N/A | Click |
| 9 | complement(1608828..1609751) | PHAGE_Pseudo_phi297: putative RecT protein; Rvan_1470; phage(gi374531258) | 2e-37 | Click |
| 10 | complement(1609748..1610743) | PHAGE_Burkho_BcepIL02: RecB-like nuclease; Rvan_1471; phage(gi238801623) | 9e-46 | Click |
| 11 | complement(1610921..1611550) | PHAGE_Burkho_Bcep22: Bcep22gp13; Rvan_1472; phage(gi38640320) | 3e-09 | Click |
| 12 | 1612081..1612452 | hypothetical protein; Rvan_1473 | N/A | Click |
| 13 | 1612452..1613873 | PHAGE_Lactob_A2: putative helicase; Rvan_1474; phage(gi22296555) | 4e-72 | Click |
| 14 | 1613883..1614152 | hypothetical protein; Rvan_1475 | N/A | Click |
| 15 | 1614152..1614571 | PHAGE_Edward_MSW_3: hypothetical protein; Rvan_1476; phage(gi448261081) | 1e-05 | Click |
| 16 | 1614568..1617117 | PHAGE_Entero_P4: DNA primase; Rvan_1477; phage(gi9627512) | 2e-16 | Click |
| 17 | complement(1617135..1618718) | PHAGE_Stx2_c_1717: transposase; Rvan_1478; phage(gi209447153) | 3e-107 | Click |
| 18 | complement(1618815..1619162) | PHAGE_Stx2_c_1717: transposase; Rvan_1479; phage(gi209447152) | 4e-33 | Click |
| 19 | complement(1619159..1619572) | PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; Rvan_1480; phage(gi17546153) | 1e-09 | Click |
| 20 | 1620238..1620954 | PHAGE_Brucel_Tb: putative HNH endonuclease; Rvan_1481; phage(gi418487693) | 4e-06 | Click |
| 21 | complement(1620900..1621370) | PHAGE_Burkho_AH2: Vsr endonuclease; Rvan_1482; phage(gi399529071) | 1e-32 | Click |
| 22 | complement(1621363..1623357) | PHAGE_Pseudo_LUZ7: N4 gp33-like protein; Rvan_1483; phage(gi282599438) | 6e-05 | Click |
| 23 | complement(1623354..1624445) | PHAGE_Thermu_26: C5 cytosine-specific DNA methylase; Rvan_1484; phage(gi157265426) | 8e-17 | Click |
| 24 | 1624929..1625129 | hypothetical protein; Rvan_1485 | N/A | Click |
| 25 | complement(1625141..1625956) | PHAGE_Bordet_1: adenine DNA methyltransferase; Rvan_1486; phage(gi41179391) | 6e-52 | Click |
| 26 | 1626295..1626489 | hypothetical protein; Rvan_1487 | N/A | Click |
| 27 | complement(1626572..1626949) | PHAGE_Entero_4795: hypothetical protein PBV4795_ORF21; Rvan_1488; phage(gi157166006) | 3e-18 | Click |
| 28 | 1637287..1637298 | attR CATATTTGGTGA | N/A | Click |
Region 2, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3012901..3013866 | PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; Rvan_2764; phage(gi160688404) | 2e-06 | Click |
| 2 | 3014283..3014738 | AOT6; amino acid transporter; Rvan_2765 | N/A | Click |
| 3 | 3014759..3016216 | O-antigen polymerase; Rvan_2766 | N/A | Click |
| 4 | 3016267..3017817 | sugar transferase; Rvan_2767 | N/A | Click |
| 5 | 3017907..3018674 | hypothetical protein; Rvan_2768 | N/A | Click |
| 6 | 3019058..3019149 | tRNA | N/A | Click |
| 7 | 3019166..3019177 | attL CAATGAAATCAA | N/A | Click |
| 8 | complement(3019218..3020276) | PHAGE_Azospi_Cd: integrase; Rvan_2769; phage(gi168495175) | 4e-33 | Click |
| 9 | complement(3020297..3020650) | PHAGE_Loktan_pCB2051_A: hypothetical protein; Rvan_2770; phage(gi472341407) | 2e-06 | Click |
| 10 | complement(3020632..3020883) | hypothetical protein; Rvan_2771 | N/A | Click |
| 11 | complement(3020862..3021236) | hypothetical protein; Rvan_2772 | N/A | Click |
| 12 | complement(3021220..3021540) | PHAGE_Salmon_1: hypothetical protein STM0912.2n.Fels1; Rvan_2773; phage(gi169257189) | 1e-10 | Click |
| 13 | complement(3021540..3021761) | hypothetical protein; Rvan_2774 | N/A | Click |
| 14 | complement(3021764..3023566) | PHAGE_Stenot_S1: putative major head protein; Rvan_2775; phage(gi213163906) | 8e-52 | Click |
| 15 | complement(3023547..3024887) | PHAGE_Vibrio_vB_VpaM_MAR: portal protein; Rvan_2776; phage(gi428782728) | 2e-51 | Click |
| 16 | complement(3024890..3025420) | hypothetical protein; Rvan_2777 | N/A | Click |
| 17 | 3025663..3025914 | hypothetical protein; Rvan_2778 | N/A | Click |
| 18 | 3025919..3026038 | hypothetical protein; Rvan_2779 | N/A | Click |
| 19 | complement(3026106..3027911) | PHAGE_Vibrio_VHML: ORF22; Rvan_2780; phage(gi27311189) | 8e-86 | Click |
| 20 | 3028838..3028849 | attR CAATGAAATCAA | N/A | Click |
Region 3, total : 14 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3536594..3536606 | attL TGGAAGGATGCGC | N/A | Click |
| 2 | 3550253..3552205 | PHAGE_Ectoca_1: EsV-1-65; Rvan_3255; phage(gi13242537) | 6e-19 | Click |
| 3 | 3552325..3553599 | PHAGE_Ectoca_1: EsV-1-65; Rvan_3256; phage(gi13242537) | 2e-17 | Click |
| 4 | 3553731..3554621 | PHAGE_Feldma_virus: putative sensor histidine kinase; Rvan_3257; phage(gi197322366) | 1e-08 | Click |
| 5 | complement(3554694..3555179) | PHAGE_Pelagi_HTVC008M: peroxiredoxin; Rvan_3258; phage(gi460042634) | 4e-26 | Click |
| 6 | 3555580..3556968 | PHAGE_Entero_Enc34: putative tail related protein; Rvan_3259; phage(gi422936752) | 1e-05 | Click |
| 7 | 3556975..3558333 | PROPHAGE_Escher_MG1655: carboxy-terminal protease for penicillin-binding protein 3; Rvan_3260; phage(gi16129784) | 7e-26 | Click |
| 8 | 3558425..3558724 | protein translocase subunit SecG; Rvan_3261 | N/A | Click |
| 9 | 3558960..3559460 | PHAGE_Entero_RB69: NudE nudix hydrolase; Rvan_3262; phage(gi32453613) | 2e-07 | Click |
| 10 | 3559651..3560208 | ATP synthase F1 subunit delta; Rvan_3263 | N/A | Click |
| 11 | 3560208..3561749 | ATP synthase F1 subunit alpha; Rvan_3264 | N/A | Click |
| 12 | 3561771..3562631 | ATP synthase F1 subunit gamma; Rvan_3265 | N/A | Click |
| 13 | 3562952..3564385 | ATP synthase F1 subunit beta; Rvan_3266 | N/A | Click |
| 14 | 3564483..3564884 | ATP synthase F1 subunit epsilon; Rvan_3267 | N/A | Click |
| 15 | 3565163..3565175 | attR TGGAAGGATGCGC | N/A | Click |
| 16 | 3565177..3566142 | PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; Rvan_3268; phage(gi160688404) | 2e-06 | Click |