Definition Caldicellulosiruptor hydrothermalis 108 chromosome, complete genome.
Accession NC_014652
Length 2,770,676
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 26 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(408045..408806)  PHAGE_Acidia_virus: hypothetical protein ATV_gp44 ; Calhy_0346; phage(gi75750441)  9e-11  Click
2 complement(408812..408955)  hypothetical protein; Calhy_0347  N/A  Click
3 complement(408952..409185)  hypothetical protein; Calhy_0348  N/A  Click
4 complement(409163..409453)  hypothetical protein; Calhy_0349  N/A  Click
5 complement(409476..409838)  hypothetical protein; Calhy_0350  N/A  Click
6 complement(409864..410364)  hypothetical protein; Calhy_0351  N/A  Click
7 complement(410361..410666)  hypothetical protein; Calhy_0352  N/A  Click
8 complement(410666..410920)  hypothetical protein; Calhy_0353  N/A  Click
9 complement(410920..411333)  hypothetical protein; Calhy_0354  N/A  Click
10 complement(411368..412189)  PHAGE_Bacill_IEBH: DNA replication protein DnaC ; Calhy_0355; phage(gi197261519)  4e-32  Click
11 complement(412131..412826)  hypothetical protein; Calhy_0356  N/A  Click
12 complement(412924..413259)  putative transcriptional regulator, gntr family; Calhy_0357  N/A  Click
13 complement(413288..413446)  hypothetical protein; Calhy_0358  N/A  Click
14 413640..413825  PHAGE_Clostr_phiC2: hypothetical protein phiC2p53 ; Calhy_0359; phage(gi134287385)  4e-07  Click
15 414018..414377  PHAGE_Clostr_CD119: RepR; putative repressor ; Calhy_0360; phage(gi90592681)  7e-16  Click
16 414617..414868  hypothetical protein; Calhy_0361  N/A  Click
17 414865..415203  PHAGE_Clostr_st: PemK family transcriptional regulator ; Calhy_0362; phage(gi80159713)  7e-11  Click
18 415245..415559  hypothetical protein; Calhy_0363  N/A  Click
19 415666..415983  hypothetical protein; Calhy_0364  N/A  Click
20 416074..416400  hypothetical protein; Calhy_0365  N/A  Click
21 416913..417866  PHAGE_Sodali_phiSG1: transposase ; Calhy_0366; phage(gi89886005)  1e-10  Click
22 complement(417948..418271)  hypothetical protein; Calhy_0367  N/A  Click
23 complement(418289..419140)  PHAGE_Bacill_IEBH: DNA replication protein DnaC ; Calhy_0368; phage(gi197261519)  5e-31  Click
24 complement(419106..419858)  hypothetical protein; Calhy_0369  N/A  Click
25 420001..420192  PHAGE_Clostr_phiC2: hypothetical protein phiC2p53 ; Calhy_0370; phage(gi134287385)  2e-07  Click
26 420457..423192  PHAGE_Bacill_SPBc2: putative transglycosylase ; Calhy_0371; phage(gi9630157)  7e-05  Click
Region 2, total : 66 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 793402..793447  attL    TGGCAGGGGCGGAGGGACTCGAACCCCCAGCCAACGGTTTTGGAGA  N/A  Click
2 complement(793590..794702)  PHAGE_Bacill_phBC6A52: DNA integration/recombination/invertion protein ; Calhy_0728; phage(gi31415821)  4e-76  Click
3 complement(794925..795698)  PHAGE_Acidia_virus: hypothetical protein ATV_gp44 ; Calhy_0729; phage(gi75750441)  1e-08  Click
4 complement(795786..796874)  hypothetical protein; Calhy_0730  N/A  Click
5 complement(796956..797921)  HIRAN domain-containing protein; Calhy_0731  N/A  Click
6 complement(797930..798352)  PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp47 ; Calhy_0732; phage(gi115334657)  3e-22  Click
7 complement(798363..798842)  PHAGE_Bacill_1: Immunity repressor protein ; Calhy_0733; phage(gi155042959)  4e-21  Click
8 799004..799270  hypothetical protein; Calhy_0734  N/A  Click
9 799267..799434  o-acyltransferase; Calhy_0735  N/A  Click
10 complement(799420..799965)  hypothetical protein; Calhy_0736  N/A  Click
11 complement(799966..800277)  PHAGE_Lactoc_phiLC3: phage repressor ; Calhy_0737; phage(gi45597387)  2e-05  Click
12 800438..800662  XRE family transcriptional regulator; Calhy_0738  N/A  Click
13 800705..800872  hypothetical protein; Calhy_0739  N/A  Click
14 complement(800859..801050)  hypothetical protein; Calhy_0740  N/A  Click
15 801115..801264  hypothetical protein; Calhy_0741  N/A  Click
16 complement(801261..801584)  hypothetical protein; Calhy_0742  N/A  Click
17 801653..802096  helix-turn-helix domain-containing protein; Calhy_0743  N/A  Click
18 802102..802323  DNA binding domain-containing protein, excisionase family; Calhy_0744  N/A  Click
19 802383..802655  hypothetical protein; Calhy_0745  N/A  Click
20 802747..802950  hypothetical protein; Calhy_0746  N/A  Click
21 802947..803324  hypothetical protein; Calhy_0747  N/A  Click
22 803311..803793  PHAGE_Geobac_E2: Siphovirus Gp157-like protein ; Calhy_0748; phage(gi148747762)  3e-38  Click
23 803810..804661  hypothetical protein; Calhy_0749  N/A  Click
24 804703..804776  tRNA  N/A  Click
25 804801..805343  hypothetical protein; Calhy_0750  N/A  Click
26 805351..806289  PHAGE_Escher_HK639: hypothetical protein ; Calhy_0751; phage(gi356870654)  2e-08  Click
27 806346..806888  hypothetical protein; Calhy_0752  N/A  Click
28 806888..807139  hypothetical protein; Calhy_0753  N/A  Click
29 807191..807355  hypothetical protein; Calhy_0754  N/A  Click
30 807352..807597  hypothetical protein; Calhy_0755  N/A  Click
31 807572..807925  PHAGE_Lactob_Nu: putative Holliday junction resolvase ; Calhy_0756; phage(gi78000012)  3e-12  Click
32 807927..808430  PHAGE_Geobac_E2: RinA transcriptional activator-like protein ; Calhy_0757; phage(gi158380395)  5e-07  Click
33 808634..809155  hypothetical protein; Calhy_0758  N/A  Click
34 809118..810452  PHAGE_Thermu_26: phage terminase large subunit ; Calhy_0759; phage(gi157265496)  2e-32  Click
35 810445..811911  PHAGE_Clostr_phiCD27: putative portal protein ; Calhy_0760; phage(gi209901240)  2e-139  Click
36 811922..813613  PHAGE_Clostr_phiCD27: putative head morphogenesis protein ; Calhy_0761; phage(gi209901241)  1e-71  Click
37 813610..813795  hypothetical protein; Calhy_0762  N/A  Click
38 813776..813922  hypothetical protein; Calhy_0763  N/A  Click
39 814028..815491  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp05 ; Calhy_0764; phage(gi209901242)  2e-54  Click
40 815504..815899  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp06 ; Calhy_0765; phage(gi209901243)  7e-32  Click
41 815933..816973  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp07 ; Calhy_0766; phage(gi209901244)  4e-129  Click
42 816992..817345  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp08 ; Calhy_0767; phage(gi209901245)  3e-12  Click
43 817347..817730  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp09 ; Calhy_0768; phage(gi209901246)  1e-13  Click
44 817731..818057  PHAGE_Mycoba_Troll4: gp20 ; Calhy_0769; phage(gi206599815)  6e-14  Click
45 818060..818884  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp11 ; Calhy_0770; phage(gi209901248)  3e-21  Click
46 818886..819092  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp12 ; Calhy_0771; phage(gi209901249)  7e-05  Click
47 819098..820525  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp13 ; Calhy_0772; phage(gi209901250)  1e-33  Click
48 820543..820992  hypothetical protein; Calhy_0773  N/A  Click
49 821008..821487  hypothetical protein; Calhy_0774  N/A  Click
50 821657..824281  PHAGE_Lister_B025: Tmp ; Calhy_0775; phage(gi157325231)  2e-77  Click
51 824360..824785  hypothetical protein; Calhy_0776  N/A  Click
52 824860..825576  hypothetical protein; Calhy_0777  N/A  Click
53 complement(825573..825773)  hypothetical protein; Calhy_0778  N/A  Click
54 825871..826527  PHAGE_Clostr_phiCD27: putative peptidoglycan-binding LysM ; Calhy_0779; phage(gi209901255)  7e-22  Click
55 826540..827538  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp19 ; Calhy_0780; phage(gi209901256)  8e-13  Click
56 827528..827932  hypothetical protein; Calhy_0781  N/A  Click
57 827932..828372  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp21 ; Calhy_0782; phage(gi209901258)  2e-16  Click
58 828365..829447  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp22 ; Calhy_0783; phage(gi209901259)  2e-65  Click
59 829440..829985  PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp28 ; Calhy_0784; phage(gi90592664)  1e-18  Click
60 829985..830779  hypothetical protein; Calhy_0785  N/A  Click
61 830782..831054  hypothetical protein; Calhy_0786  N/A  Click
62 831047..831193  hypothetical protein; Calhy_0787  N/A  Click
63 831378..831632  PHAGE_Entero_phiFL4A: holin ; Calhy_0788; phage(gi281416487)  5e-11  Click
64 831651..832199  PHAGE_Geobac_GBSV1: N-acetylmuramoyl-L-alanine amidase ; Calhy_0789; phage(gi115334645)  2e-19  Click
65 832196..832525  PHAGE_Strept_2972: holin ; Calhy_0790; phage(gi66391784)  4e-06  Click
66 complement(832852..832927)  tRNA  N/A  Click
67 832852..832897  attR    TGGCAGGGGCGGAGGGACTCGAACCCCCAGCCAACGGTTTTGGAGA  N/A  Click
68 833116..834510  glycoside hydrolase family 4; Calhy_0791  N/A  Click
69 complement(834557..834859)  dnab domain-containing protein; Calhy_0792  N/A  Click
70 complement(834864..835139)  PHAGE_Entero_Sf6: gene 44 protein ; Calhy_0793; phage(gi41057321)  1e-05  Click