Definition Bifidobacterium bifidum PRL2010 chromosome, complete genome.
Accession NC_014638
Length 2,214,656
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 53 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1070426..1070438  attL    TATAACCACCGTT  N/A  Click
2 1070624..1071844  PHAGE_Rhodoc_REQ2: phage integrase; BBPR_0871; phage(gi372449859)  6e-19  Click
3 1071940..1072122  hypothetical protein; BBPR_0872  N/A  Click
4 complement(1072328..1072456)  hypothetical protein; BBPR_0873  N/A  Click
5 complement(1072623..1072829)  PHAGE_Mycoba_PG1: gp45; BBPR_0874; phage(gi38638448)  3e-13  Click
6 complement(1072831..1072971)  hypothetical protein; BBPR_0875  N/A  Click
7 complement(1073035..1073160)  hypothetical protein; BBPR_0876  N/A  Click
8 1073281..1074198  PHAGE_Lactob_A2: hypothetical protein A2p19; BBPR_0877; phage(gi22296541)  1e-20  Click
9 complement(1074245..1074652)  hypothetical protein; BBPR_0878  N/A  Click
10 complement(1075328..1076032)  PHAGE_Entero_P1: RlfA; BBPR_0879; phage(gi46401673)  6e-53  Click
11 complement(1076052..1076453)  hypothetical protein; BBPR_0880  N/A  Click
12 1076577..1076822  hypothetical protein; BBPR_0881  N/A  Click
13 complement(1077089..1077625)  hypothetical protein; BBPR_0882  N/A  Click
14 1077650..1078444  PHAGE_Lactob_1: antirepressor; BBPR_0883; phage(gi219563224)  2e-55  Click
15 complement(1078592..1079047)  hypothetical protein; BBPR_0884  N/A  Click
16 complement(1079329..1079571)  hypothetical protein; BBPR_0885  N/A  Click
17 1079691..1079924  hypothetical protein; BBPR_0886  N/A  Click
18 1079953..1080168  hypothetical protein; BBPR_0887  N/A  Click
19 1080165..1080404  hypothetical protein; BBPR_0888  N/A  Click
20 1080684..1081028  hypothetical protein; BBPR_0889  N/A  Click
21 1081028..1081558  PHAGE_Microb_Min1: single-stranded DNA-binding protein; BBPR_0890; phage(gi149882804)  1e-47  Click
22 1081577..1082974  PHAGE_Agroba_7_7_1: hypothetical protein; BBPR_0891; phage(gi435844368)  1e-10  Click
23 1082971..1083888  cryptic prophage protein; BBPR_0892  N/A  Click
24 1083885..1084076  hypothetical protein; BBPR_0893  N/A  Click
25 1084073..1084477  PHAGE_Mycoba_Wildcat: gp77; BBPR_0894; phage(gi109521514)  4e-12  Click
26 1084474..1085052  oligoribonuclease Orn; BBPR_0895  N/A  Click
27 1085049..1085330  hypothetical protein; BBPR_0896  N/A  Click
28 1085327..1085632  hypothetical protein; BBPR_0897  N/A  Click
29 1085635..1085832  hypothetical protein; BBPR_0898  N/A  Click
30 1085886..1086635  hypothetical protein; BBPR_0899  N/A  Click
31 1086662..1086865  PHAGE_Haemop_HP2: hypothetical protein HP2p13; BBPR_0900; phage(gi19289355)  8e-07  Click
32 1086862..1087272  PHAGE_Bacill_phi105: hypothetical protein phi105_48; BBPR_0901; phage(gi22855041)  4e-12  Click
33 1087274..1087441  transcriptional regulator; BBPR_0902  N/A  Click
34 complement(1087594..1087797)  PHAGE_Mycoba_PG1: gp45; BBPR_0903; phage(gi38638448)  4e-12  Click
35 complement(1087787..1087945)  hypothetical protein; BBPR_0904  N/A  Click
36 complement(1088010..1088144)  hypothetical protein; BBPR_0905  N/A  Click
37 1088249..1088617  PHAGE_Strept_R4: putative HNH endonuclease; BBPR_0906; phage(gi414089986)  2e-14  Click
38 1088903..1089490  PHAGE_Strept_VWB: hypothetical protein VWBp30; BBPR_0907; phage(gi41057246)  7e-32  Click
39 1089510..1089899  PHAGE_Mycoba_Faith1: gp2; BBPR_0908; phage(gi338827014)  2e-06  Click
40 1089899..1091701  PHAGE_Rhodoc_RER2: terminase large subunit; BBPR_0909; phage(gi372449905)  5e-115  Click
41 1091695..1093101  PHAGE_Strept_phiHau3: putative portal; BBPR_0910; phage(gi410490964)  3e-51  Click
42 1093085..1094299  PHAGE_Propio_ATCC29399B_T: hypothetical protein; BBPR_0911; phage(gi410491678)  2e-19  Click
43 1094284..1094556  hypothetical protein; BBPR_0912  N/A  Click
44 1094893..1095447  PHAGE_Mycoba_Che9d: gp6; BBPR_0913; phage(gi29566413)  1e-07  Click
45 1095477..1096433  PHAGE_Mycoba_TM4: major capsid subunit gp9; BBPR_0914; phage(gi18496895)  5e-40  Click
46 1096433..1096867  PHAGE_Bacill_B103: head fiber protein; BBPR_0915; phage(gi22855156)  2e-07  Click
47 1096881..1097378  hypothetical protein; BBPR_0916  N/A  Click
48 1097375..1097809  putative phage associated protein; BBPR_0917  N/A  Click
49 1097799..1098227  hypothetical protein; BBPR_0918  N/A  Click
50 1098224..1098634  transcriptional regulator; BBPR_0919  N/A  Click
51 1098708..1099250  gp28; BBPR_0920  N/A  Click
52 1099345..1099851  putative DNAase primase; BBPR_0921  N/A  Click
53 1099914..1100210  phage terminase protein large subunit-like protein; BBPR_0922  N/A  Click
54 1100221..1103355  PHAGE_Clostr_phiCTP1: putative tape measure protein; BBPR_0923; phage(gi304360684)  1e-61  Click
55 1111980..1111992  attR    TATAACCACCGTT  N/A  Click
Region 2, total : 6 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2122478..2122514  attL    CCTGTTTGCGTACCTAAGTGCGCACGGTCGTCGTTTC  N/A  Click
2 complement(2130518..2133022)  PHAGE_Skua_A: sialidase; BBPR_1794; phage(gi363540914)  2e-06  Click
3 complement(2133378..2133890)  PHAGE_Microc_LMM01: putative site-specific integrase-resolvase; BBPR_1795; phage(gi117530307)  8e-05  Click
4 complement(2133982..2134989)  PHAGE_Cafete_BV_PW1: putative DnaJ/Hsp40; BBPR_1796; phage(gi310831116)  2e-25  Click
5 complement(2135412..2136116)  PHAGE_Salmon_1: putative bacteriophage tail fiber protein; Lambda gpN homolog; BBPR_1797; phage(gi169257204)  5e-05  Click
6 complement(2136119..2138002)  PHAGE_Bathyc_BpV1: hypothetical protein; BBPR_1798; phage(gi313768007)  2e-146  Click
7 complement(2138380..2140512)  PHAGE_Prochl_P_SSM7: YadA domain-containing structural protein; BBPR_1800; phage(gi326784580)  1e-05  Click
8 2143521..2143557  attR    CCTGTTTGCGTACCTAAGTGCGCACGGTCGTCGTTTC  N/A  Click