Definition Paenibacillus polymyxa SC2 chromosome, complete genome.
Accession NC_014622
Length 5,731,816
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1297110..1299017)  PHAGE_Entero_phiFL3A: endolysin; PPSC2_c1154; phage(gi281416276)  6e-07  Click
2 complement(1299213..1299638)  PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp4; PPSC2_c1155; phage(gi56694873)  7e-18  Click
3 complement(1299650..1300123)  PHAGE_Lactob_phig1e: repressor; PPSC2_c1156; phage(gi23455773)  7e-09  Click
4 1300400..1300888  PHAGE_Bacill_phIS3501: ArpU family phage transcriptional regulator; PPSC2_c1157; phage(gi422934318)  5e-18  Click
5 1300995..1301849  aminoglycoside 6-adenylyltransferase (aad(6)); PPSC2_c1158  N/A  Click
6 1302169..1302306  hypothetical protein; PPSC2_c1159  N/A  Click
7 1302303..1303163  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp11; PPSC2_c1160; phage(gi209901248)  2e-14  Click
8 1303174..1303392  protein; PPSC2_c1161  N/A  Click
9 1303395..1304861  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp13; PPSC2_c1162; phage(gi209901250)  7e-59  Click
10 1304983..1305390  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp14; PPSC2_c1163; phage(gi209901251)  5e-23  Click
11 1305490..1305924  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp15; PPSC2_c1164; phage(gi209901252)  1e-15  Click
12 1305948..1306076  hypothetical protein; PPSC2_c1165  N/A  Click
13 1306097..1307977  hypothetical protein; PPSC2_c1166  N/A  Click
14 1307994..1308635  PHAGE_Clostr_phiCD27: putative peptidoglycan-binding LysM; PPSC2_c1167; phage(gi209901255)  1e-37  Click
15 1308632..1309609  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp19; PPSC2_c1168; phage(gi209901256)  2e-45  Click
16 1309602..1310009  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp20; PPSC2_c1169; phage(gi209901257)  2e-05  Click
17 1309996..1310466  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp21; PPSC2_c1170; phage(gi209901258)  4e-16  Click
18 1310466..1311617  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp22; PPSC2_c1171; phage(gi209901259)  1e-37  Click
19 1311724..1312284  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp23; PPSC2_c1172; phage(gi209901260)  7e-15  Click
20 1312286..1314841  PHAGE_Bacill_B4: putative tail fiber; PPSC2_c1173; phage(gi410493410)  1e-12  Click
21 1314855..1315466  protein; PPSC2_c1174  N/A  Click
22 1315525..1315791  hypothetical protein; PPSC2_c1175  N/A  Click
23 1315878..1316324  PHAGE_Bacill_PBC1: holin; PPSC2_c1176; phage(gi389060343)  3e-29  Click
24 1316326..1316496  hypothetical protein; PPSC2_c1177  N/A  Click
25 1316477..1317442  PHAGE_Clostr_phiSM101: autolytic lysozyme; PPSC2_c1178; phage(gi110804057)  4e-28  Click
Region 2, total : 17 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(3688004..3689356)  PHAGE_Strept_1: sheath tail protein; PPSC2_c3466; phage(gi39653727)  2e-26  Click
2 complement(3689337..3689597)  hypothetical protein; PPSC2_c3467  N/A  Click
3 complement(3689594..3690088)  protein; PPSC2_c3468  N/A  Click
4 complement(3690088..3690582)  phage-like element pbsx protein xkdi; PPSC2_c3469  N/A  Click
5 complement(3690569..3690736)  hypothetical protein; PPSC2_c3470  N/A  Click
6 complement(3690892..3691275)  hypothetical protein; PPSC2_c3471  N/A  Click
7 complement(3691244..3691570)  PHAGE_Bacill_PM1: hypothetical protein; PPSC2_c3472; phage(gi472438312)  6e-07  Click
8 complement(3691606..3692538)  PHAGE_Natria_PhiCh1: capsid protein gpE; PPSC2_c3473; phage(gi22091115)  5e-06  Click
9 complement(3692563..3693822)  PHAGE_Methan_psiM100: putative structural protein; PPSC2_c3474; phage(gi11863104)  1e-09  Click
10 complement(3693851..3694681)  PHAGE_Clostr_O: minor head protein; PPSC2_c3475; phage(gi208429860)  1e-15  Click
11 complement(3694674..3696170)  PHAGE_Vibrio_SIO_2: capsid portal protein; PPSC2_c3476; phage(gi371496385)  4e-22  Click
12 complement(3696174..3697859)  PHAGE_Escher_TL_2011c: putative large subunit terminase; PPSC2_c3477; phage(gi418487073)  5e-33  Click
13 complement(3697853..3698737)  PHAGE_Entero_phiEf11: phage terminase A domain protein; PPSC2_c3478; phage(gi282598724)  2e-32  Click
14 complement(3698865..3699707)  hypothetical protein; PPSC2_c3479  N/A  Click
15 complement(3699704..3699817)  hypothetical protein; PPSC2_c3480  N/A  Click
16 complement(3699868..3700368)  pxo1-15; PPSC2_c3481  N/A  Click
17 complement(3700514..3700732)  PHAGE_Entero_phiEf11: conserved domain protein; PPSC2_c3482; phage(gi282598729)  7e-05  Click
Region 3, total : 14 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 5582553..5582565  attL    GCGCTACCTCTGT  N/A  Click
2 5595297..5595632  site-specific recombinase, phage integrase family; PPSC2_c5312  N/A  Click
3 5595752..5596045  hypothetical protein; PPSC2_c5313  N/A  Click
4 complement(5596267..5596935)  protein; PPSC2_c5314  N/A  Click
5 5597092..5598630  oxidoreductase, with rieske iron-sulfur protein 2fe-2S subunit; PPSC2_c5315  N/A  Click
6 5598802..5598957  spore coat protein f-like protein yrag; PPSC2_c5316  N/A  Click
7 5598968..5599378  spore coat protein f-like protein yraf; PPSC2_c5317  N/A  Click
8 5599375..5600511  PHAGE_Synech_S_SM2: zinc-containing alcohol dehydrogenase superfamily protein; PPSC2_c5318; phage(gi326781942)  1e-14  Click
9 5600541..5600753  spore coat protein-like protein; PPSC2_c5319  N/A  Click
10 5600750..5601049  spore coat protein f-like protein yrad; PPSC2_c5320  N/A  Click
11 complement(5601166..5602152)  aryl alcohol dehydrogenase; PPSC2_c5321  N/A  Click
12 5602260..5602439  hypothetical protein; PPSC2_c5322  N/A  Click
13 5602391..5603098  hypothetical protein; PPSC2_c5323  N/A  Click
14 complement(5603147..5603638)  hypothetical protein; PPSC2_c5324  N/A  Click
15 5603758..5604942  PHAGE_Bathyc_BpV1: hypothetical protein; PPSC2_c5325; phage(gi313768166)  2e-19  Click
16 5617275..5617287  attR    GCGCTACCTCTGT  N/A  Click