Definition Halomonas elongata DSM 2581, complete genome.
Accession NC_014532
Length 4,061,296
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 38 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1227661..1228020  PHAGE_Azospi_Cd: hypothetical protein APCd_gp20; HELO_2068; phage(gi168495123)  2e-15  Click
2 complement(1228462..1228884)  hypothetical protein; HELO_2069  N/A  Click
3 complement(1228881..1230320)  PHAGE_Rhodob_RcapMu: putative tail fiber protein; HELO_2070; phage(gi356870896)  7e-11  Click
4 complement(1230324..1230521)  hypothetical protein; HELO_2071  N/A  Click
5 complement(1230571..1236975)  PHAGE_Rhodob_RcapMu: putative tail fiber protein; HELO_2072; phage(gi356870893)  5e-76  Click
6 complement(1236935..1237348)  PHAGE_Rhodov_RS1: tail assembly protein; HELO_2073; phage(gi472342927)  1e-16  Click
7 complement(1237345..1237830)  PHAGE_Xantho_CP1: hypothetical protein; HELO_2074; phage(gi431811015)  4e-07  Click
8 1237981..1238574  chorismate mutase; HELO_2075  N/A  Click
9 complement(1238583..1238945)  PHAGE_Rhodov_RS1: hypothetical protein; HELO_2076; phage(gi472342925)  4e-07  Click
10 complement(1238955..1241465)  PHAGE_Pseudo_MP29: putative tail component protein; HELO_2077; phage(gi215480016)  6e-67  Click
11 1241996..1242283  PHAGE_Riemer_RAP44: DUF2136 superfamily protein; HELO_2078; phage(gi418489860)  3e-08  Click
12 1242287..1242715  PHAGE_Entero_4795: hypothetical protein PBV4795_ORF21; HELO_2079; phage(gi157166006)  5e-05  Click
13 complement(1242789..1242977)  hypothetical protein; HELO_2080  N/A  Click
14 complement(1243085..1243555)  hypothetical protein; HELO_2081  N/A  Click
15 complement(1243565..1244500)  PHAGE_Acinet_Bphi_B1251: hypothetical protein; HELO_2082; phage(gi423262017)  3e-07  Click
16 complement(1244576..1244953)  PHAGE_Acinet_Bphi_B1251: hypothetical protein; HELO_2083; phage(gi423262013)  6e-06  Click
17 complement(1244950..1245339)  PHAGE_Acinet_Bphi_B1251: hypothetical protein; HELO_2084; phage(gi423262012)  2e-06  Click
18 complement(1245341..1245721)  PHAGE_Acinet_Bphi_B1251: hypothetical protein; HELO_2085; phage(gi423262010)  4e-10  Click
19 complement(1245708..1246112)  PHAGE_Acinet_Bphi_B1251: hypothetical protein; HELO_2086; phage(gi423262009)  8e-09  Click
20 complement(1246152..1246385)  hypothetical protein; HELO_2087  N/A  Click
21 complement(1246388..1247353)  PHAGE_Erwini_phiEt88: hypothetical protein; HELO_2088; phage(gi327198568)  1e-52  Click
22 complement(1247366..1247791)  hypothetical protein; HELO_2089  N/A  Click
23 complement(1247788..1248894)  PHAGE_Xantho_vB_XveM_DIBBI: major capsid protein; HELO_2090; phage(gi389060407)  3e-49  Click
24 complement(1248891..1249727)  PHAGE_Xantho_vB_XveM_DIBBI: head morphogenesis protein; HELO_2091; phage(gi389060406)  6e-34  Click
25 complement(1249720..1250964)  PHAGE_Erwini_phiEt88: portal protein; HELO_2092; phage(gi327198564)  9e-38  Click
26 complement(1250973..1252568)  PHAGE_Burkho_BcepB1A: gp33 TerL; HELO_2093; phage(gi48697520)  4e-160  Click
27 complement(1252568..1253158)  PHAGE_Pseudo_phi297: terminase small subunit; HELO_2094; phage(gi374531284)  6e-48  Click
28 complement(1254349..1254972)  PHAGE_Halomo_1: hypothetical protein HAPgp45; HELO_2095; phage(gi167832390)  3e-56  Click
29 complement(1255234..1255863)  PHAGE_Pseudo_phi297: hypothetical protein; HELO_2096; phage(gi374531281)  4e-08  Click
30 complement(1256035..1256430)  hypothetical protein; HELO_2097  N/A  Click
31 complement(1256430..1256864)  PHAGE_Entero_mEp460: hypothetical protein; HELO_2098; phage(gi428782365)  2e-08  Click
32 complement(1257055..1257561)  hypothetical protein; HELO_2099  N/A  Click
33 complement(1257899..1258108)  hypothetical protein; HELO_2100  N/A  Click
34 complement(1258365..1259099)  PHAGE_Pseudo_F116: hypothetical protein F116p33; HELO_2101; phage(gi56692949)  2e-34  Click
35 complement(1259103..1260053)  PHAGE_Pseudo_F116: hypothetical protein F116p32; HELO_2102; phage(gi56692948)  9e-30  Click
36 complement(1260050..1260838)  PHAGE_Pseudo_F10: Conserved hypothetical protein; putative antirepressor; HELO_2103; phage(gi148912801)  9e-38  Click
37 complement(1260912..1261370)  hypothetical protein; HELO_2104  N/A  Click
38 1261679..1262434  PHAGE_Bordet_1: repressor protein cI; HELO_2105; phage(gi41179362)  2e-34  Click
Region 2, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1893443..1893454  attL    TCAGCATACCGA  N/A  Click
2 complement(1906889..1907656)  PHAGE_Clostr_phiCP34O: P22 coat protein; HELO_2643; phage(gi422935436)  5e-25  Click
3 complement(1908823..1909797)  PHAGE_Human__8: LANA; HELO_2644; phage(gi139472804)  3e-06  Click
4 complement(1910059..1912308)  PHAGE_Roseop_DSS3P2: putative portal protein; HELO_2645; phage(gi237651609)  3e-07  Click
5 complement(1912777..1914381)  PHAGE_Cronob_phiES15: terminase large subunit; HELO_2646; phage(gi401817592)  2e-121  Click
6 complement(1914368..1914925)  PHAGE_Escher_HK639: terminase small subunit; HELO_2647; phage(gi356870601)  2e-11  Click
7 complement(1915123..1915674)  PHAGE_Thalas_BA3: hypothetical protein BA3_0023; HELO_2648; phage(gi160700617)  2e-15  Click
8 complement(1915671..1916018)  hypothetical protein; HELO_2649  N/A  Click
9 complement(1916015..1916569)  PHAGE_Burkho_BcepC6B: putative endolysin protein; HELO_2650; phage(gi48697212)  6e-41  Click
10 complement(1917634..1918248)  hypothetical protein; HELO_2651  N/A  Click
11 complement(1918947..1919240)  PHAGE_Escher_HK639: hypothetical protein; HELO_2652; phage(gi356870664)  3e-25  Click
12 complement(1919240..1919743)  PHAGE_Pseudo_F116: hypothetical protein F116p34; HELO_2653; phage(gi56692950)  5e-30  Click
13 complement(1919743..1920051)  hypothetical protein; HELO_2654  N/A  Click
14 complement(1920074..1920901)  PHAGE_Entero_mEpX1: putative replication protein DnaC; HELO_2655; phage(gi428781919)  3e-38  Click
15 complement(1920904..1921866)  PHAGE_Entero_lambda: DNA replication protein; HELO_2656; phage(gi9626295)  7e-14  Click
16 1925052..1926152  PHAGE_Lister_A006: gp41; HELO_2657; phage(gi157325458)  1e-27  Click
17 1926149..1927129  PHAGE_Rhodoc_REQ3: Rect-like protein; HELO_2658; phage(gi372449982)  1e-11  Click
18 1927181..1927546  PHAGE_Escher_TL_2011c: hypothetical protein; HELO_2659; phage(gi418487086)  1e-18  Click
19 1927543..1928340  PHAGE_Thalas_BA3: hypothetical protein BA3_0030; HELO_2660; phage(gi160700624)  3e-34  Click
20 1929263..1931068  PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp44; HELO_2661; phage(gi17313261)  0.0  Click
21 1931098..1931955  PHAGE_Pseudo_F116: DNA adenine methyltransferase; HELO_2662; phage(gi56692911)  5e-68  Click
22 1931972..1932553  hypothetical protein; HELO_2663  N/A  Click
23 1932550..1932912  hypothetical protein; HELO_2664  N/A  Click
24 1933546..1934574  PHAGE_Pectob_ZF40: putative integrase; HELO_2665; phage(gi422936642)  9e-28  Click
25 1935093..1935104  attR    TCAGCATACCGA  N/A  Click
Region 3, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3732629..3732640  attL    TGATGGTCTGTC  N/A  Click
2 complement(3740660..3741883)  PHAGE_Klebsi_phiKO2: putative head maturation protease; HELO_4185; phage(gi46402091)  1e-26  Click
3 complement(3741921..3743576)  PHAGE_Provid_Redjac: phage portal protein; HELO_4186; phage(gi410490794)  9e-36  Click
4 complement(3743579..3743803)  hypothetical protein; HELO_4187  N/A  Click
5 complement(3743800..3745776)  PHAGE_Stenot_S1: putative terminase large subunit; HELO_4188; phage(gi213163902)  1e-63  Click
6 complement(3745733..3746326)  PHAGE_Entero_mEp237: terminase small subunit nu1; HELO_4189; phage(gi435439266)  1e-09  Click
7 complement(3747400..3747885)  hypothetical protein; HELO_4190  N/A  Click
8 complement(3747882..3748223)  PHAGE_Pseudo_F10: Putative Holin; HELO_4191; phage(gi148912825)  2e-18  Click
9 complement(3748264..3748842)  PHAGE_Acinet_Ac42: putative N-acetylmuramoyl-L-alanine amidase; HELO_4192; phage(gi311992511)  1e-28  Click
10 complement(3749109..3749489)  hypothetical protein; HELO_4193  N/A  Click
11 3749740..3749751  attR    TGATGGTCTGTC  N/A  Click
12 complement(3749764..3751221)  PHAGE_Pseudo_MP1412: integrase; HELO_4194; phage(gi399528988)  3e-22  Click
13 complement(3751221..3752258)  PHAGE_Entero_P4: DNA primase; HELO_4195; phage(gi9627512)  1e-14  Click