| Definition | Streptococcus pneumoniae 670-6B chromosome, complete genome. |
|---|---|
| Accession | NC_014498 |
| Length | 2,240,045 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 21 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3143..3156 | attL CCCTTTTTGTGTTA | N/A | Click |
| 2 | complement(5323..5826) | phage protein; SP670_0006 | N/A | Click |
| 3 | complement(5895..6398) | phage protein; SP670_0007 | N/A | Click |
| 4 | complement(6913..8391) | PHAGE_Lactoc_bIL310: helicase; SP670_0008; phage(gi13095886) | 6e-63 | Click |
| 5 | complement(8435..9295) | PHAGE_Staphy_PT1028: ORF003; SP670_0009; phage(gi66395167) | 2e-11 | Click |
| 6 | complement(9292..9564) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p19; SP670_0010; phage(gi13095880) | 1e-08 | Click |
| 7 | complement(9557..9898) | PHAGE_Strept_M102: hypothetical protein M102_gp29; SP670_0011; phage(gi242345600) | 6e-07 | Click |
| 8 | complement(9879..10172) | hypothetical protein; SP670_0012 | N/A | Click |
| 9 | complement(10169..10384) | hypothetical protein; SP670_0013 | N/A | Click |
| 10 | complement(10446..10586) | hypothetical protein; SP670_0014 | N/A | Click |
| 11 | complement(10598..11098) | hypothetical protein; SP670_0015 | N/A | Click |
| 12 | complement(11118..11234) | hypothetical protein; SP670_0016 | N/A | Click |
| 13 | complement(11492..11641) | hypothetical protein; SP670_0017 | N/A | Click |
| 14 | complement(11628..11774) | hypothetical protein; SP670_0018 | N/A | Click |
| 15 | complement(11778..12206) | phage protein; SP670_0019 | N/A | Click |
| 16 | complement(12362..12529) | hypothetical protein; SP670_0020 | N/A | Click |
| 17 | complement(12806..13432) | PHAGE_Lactoc_bIL310: anti-repressor; SP670_0021; phage(gi13095876) | 2e-07 | Click |
| 18 | complement(13423..14007) | PHAGE_Staphy_phiMR25: putative anti-repressor protein; SP670_0022; phage(gi189427129) | 3e-11 | Click |
| 19 | complement(14307..14459) | PHAGE_Staphy_29: ORF049; SP670_0023; phage(gi66396236) | 3e-10 | Click |
| 20 | 14702..15418 | PHAGE_Strept_1: cI repressor; SP670_0024; phage(gi39653678) | 2e-77 | Click |
| 21 | 16644..17498 | PHAGE_Riemer_RAP44: DNA-damage-inducible protein D; SP670_0025; phage(gi418489887) | 5e-44 | Click |
| 22 | 17663..18829 | PHAGE_Lactoc_bIL310: integrase; SP670_0026; phage(gi13095863) | 2e-72 | Click |
| 23 | 18896..18909 | attR CCCTTTTTGTGTTA | N/A | Click |
Region 2, total : 62 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 30728..30739 | attL AAAGTTTGAAAA | N/A | Click |
| 2 | 37951..39279 | PHAGE_Megavi_lba: adenylosuccinate synthetase; SP670_0044; phage(gi448826112) | 3e-72 | Click |
| 3 | complement(39521..40669) | PHAGE_Strept_1: putative integrase; SP670_0045; phage(gi28876146) | 8e-134 | Click |
| 4 | complement(40841..41755) | PHAGE_Strept_SM1: gp2; SP670_0046; phage(gi32469433) | 1e-48 | Click |
| 5 | complement(41768..42502) | PHAGE_Strept_2: putative repressor protein; SP670_0047; phage(gi28876261) | 1e-81 | Click |
| 6 | 42668..42883 | PHAGE_Clostr_phi3626: putative Cro-like protein; SP670_0048; phage(gi20065988) | 5e-12 | Click |
| 7 | 42911..43621 | PHAGE_Strept_SM1: gp15; SP670_0049; phage(gi32469446) | 8e-114 | Click |
| 8 | 43634..43891 | PHAGE_Strept_PH10: hypothetical protein PH10_gp09; SP670_0050; phage(gi238821326) | 6e-41 | Click |
| 9 | 43939..43954 | attL ACTATATTATAGCACA | N/A | Click |
| 10 | 43977..44297 | PHAGE_Strept_1: hypothetical protein EJ-1p17; SP670_0051; phage(gi39653691) | 5e-40 | Click |
| 11 | 44313..44609 | PHAGE_Strept_SM1: gp18; SP670_0052; phage(gi32469449) | 3e-07 | Click |
| 12 | 44593..45408 | PHAGE_Strept_SM1: gp19; SP670_0053; phage(gi32469450) | 7e-125 | Click |
| 13 | 45396..45554 | PHAGE_Strept_SM1: gp20; SP670_0054; phage(gi32469451) | 7e-13 | Click |
| 14 | 45548..46318 | PHAGE_Strept_SM1: gp21; SP670_0055; phage(gi32469452) | 1e-124 | Click |
| 15 | 46333..46527 | PHAGE_Strept_PH10: hypothetical protein PH10_gp12; SP670_0056; phage(gi238821329) | 4e-18 | Click |
| 16 | 46527..47201 | PHAGE_Strept_phi3396: putative N-6 adenine-specific DNA methylase; SP670_0057; phage(gi126011082) | 6e-111 | Click |
| 17 | 47211..47429 | PHAGE_Strept_PH10: hypothetical protein PH10_gp15; SP670_0058; phage(gi238821332) | 3e-15 | Click |
| 18 | 47429..47734 | hypothetical protein; SP670_0059 | N/A | Click |
| 19 | 47825..47992 | hypothetical protein; SP670_0060 | N/A | Click |
| 20 | 48160..48477 | PHAGE_Strept_SM1: gp24; SP670_0061; phage(gi32469455) | 7e-51 | Click |
| 21 | 48479..49153 | PHAGE_Strept_MM1: hypothetical protein MM1p23; SP670_0062; phage(gi15088764) | 3e-67 | Click |
| 22 | 49153..49440 | PHAGE_Strept_MM1: hypothetical protein MM1p24; SP670_0063; phage(gi15088765) | 5e-49 | Click |
| 23 | 49625..49963 | hypothetical protein; SP670_0064 | N/A | Click |
| 24 | 50058..50225 | PHAGE_Strept_SM1: gp27; SP670_0065; phage(gi32469458) | 7e-14 | Click |
| 25 | 50225..50683 | hypothetical protein; SP670_0066 | N/A | Click |
| 26 | 50692..51075 | PHAGE_Strept_PH10: hypothetical protein PH10_gp17; SP670_0067; phage(gi238821334) | 1e-25 | Click |
| 27 | 51087..51494 | PHAGE_Entero_phiFL3A: hypothetical protein; SP670_0068; phage(gi281416242) | 9e-11 | Click |
| 28 | 51494..51730 | PHAGE_Strept_SM1: gp29; SP670_0069; phage(gi32469460) | 1e-31 | Click |
| 29 | 51892..52122 | transcriptional regulator; SP670_0070 | N/A | Click |
| 30 | 52195..52623 | PHAGE_Strept_SM1: gp31; SP670_0071; phage(gi32469462) | 2e-26 | Click |
| 31 | 52620..52739 | hypothetical protein; SP670_0072 | N/A | Click |
| 32 | 52913..53479 | PHAGE_Strept_SM1: gp32; SP670_0073; phage(gi32469463) | 1e-77 | Click |
| 33 | 54196..55659 | PHAGE_Strept_SM1: gp34; SP670_0074; phage(gi32469465) | 2e-179 | Click |
| 34 | 55652..57043 | PHAGE_Strept_SM1: gp35; SP670_0075; phage(gi32469466) | 9e-85 | Click |
| 35 | 57033..57272 | hypothetical protein; SP670_0076 | N/A | Click |
| 36 | 57325..57555 | hypothetical protein; SP670_0077 | N/A | Click |
| 37 | 57606..59018 | PHAGE_Strept_SM1: gp38; SP670_0078; phage(gi32469469) | 0.0 | Click |
| 38 | 59101..59565 | PHAGE_Strept_SM1: gp39; SP670_0079; phage(gi32469470) | 7e-41 | Click |
| 39 | 59572..60468 | PHAGE_Strept_SM1: gp40; SP670_0080; phage(gi32469471) | 2e-65 | Click |
| 40 | 60474..60686 | PHAGE_Strept_SM1: gp41; SP670_0081; phage(gi32469472) | 7e-08 | Click |
| 41 | 60690..61130 | PHAGE_Strept_SM1: gp42; SP670_0082; phage(gi32469473) | 3e-51 | Click |
| 42 | 61117..61413 | PHAGE_Strept_SM1: gp43; SP670_0083; phage(gi32469474) | 4e-41 | Click |
| 43 | 61415..61642 | PHAGE_Strept_SM1: gp44; SP670_0084; phage(gi32469475) | 6e-09 | Click |
| 44 | 61639..61974 | PHAGE_Strept_SM1: gp45; SP670_0085; phage(gi32469476) | 7e-40 | Click |
| 45 | 61990..62598 | PHAGE_Strept_SM1: hypothetical protein SM1p46; SP670_0086; phage(gi32469421) | 1e-68 | Click |
| 46 | 62604..62879 | PHAGE_Strept_SM1: hypothetical protein SM1p47; SP670_0087; phage(gi32469422) | 1e-06 | Click |
| 47 | 62891..63277 | PHAGE_Strept_SM1: hypothetical protein SM1p48; SP670_0088; phage(gi32469423) | 2e-39 | Click |
| 48 | 63277..65742 | PHAGE_Strept_SM1: PblA; SP670_0089; phage(gi32469424) | 0.0 | Click |
| 49 | 65742..66440 | PHAGE_Strept_SM1: hypothetical protein SM1p50; SP670_0090; phage(gi32469425) | 3e-88 | Click |
| 50 | 66437..74536 | PHAGE_Strept_SM1: PblB; SP670_0091; phage(gi32469426) | 4e-168 | Click |
| 51 | 74533..74649 | PHAGE_Strept_PH10: hypothetical protein PH10_gp46; SP670_0092; phage(gi238821363) | 1e-09 | Click |
| 52 | 74630..74833 | PHAGE_Strept_PH10: hypothetical protein PH10_gp47; SP670_0093; phage(gi238821364) | 1e-28 | Click |
| 53 | 74836..75186 | PHAGE_Strept_SMP: hypothetical protein; SP670_0094; phage(gi119953750) | 8e-44 | Click |
| 54 | 75196..75612 | PHAGE_Strept_MM1: putative holin 1; SP670_0095; phage(gi15088791) | 4e-69 | Click |
| 55 | 75616..75951 | PHAGE_Strept_SM1: hypothetical protein SM1p55; SP670_0096; phage(gi32469430) | 6e-49 | Click |
| 56 | 75951..76907 | PHAGE_Strept_SM1: gp56; SP670_0097; phage(gi32469431) | 1e-53 | Click |
| 57 | complement(77177..77356) | PHAGE_Strept_PH10: hypothetical protein PH10_gp52; SP670_0098; phage(gi238821369) | 4e-25 | Click |
| 58 | 77929..78396 | PHAGE_Microm_MpV1: hypothetical protein; SP670_0099; phage(gi313768407) | 2e-07 | Click |
| 59 | 78582..79025 | PHAGE_Clostr_st: putative dUTPase; SP670_0100; phage(gi80159764) | 3e-31 | Click |
| 60 | 78985..79542 | phosphoglycerate mutase family protein; SP670_0101 | N/A | Click |
| 61 | 79655..80917 | PHAGE_Bacill_W.Ph.: gp46; SP670_0102; phage(gi371671106) | 1e-06 | Click |
| 62 | 80990..81487 | carbonate dehydratase; SP670_0103 | N/A | Click |
| 63 | 81508..82323 | hypothetical protein; SP670_0104 | N/A | Click |
| 64 | 82468..83436 | PHAGE_Salmon_7_11: putative ribose-phosphate pyrophosphokinase; SP670_0105; phage(gi345461227) | 1e-19 | Click |
| 65 | 85004..85019 | attR ACTATATTATAGCACA | N/A | Click |
| 66 | 85071..85082 | attR AAAGTTTGAAAA | N/A | Click |
Region 3, total : 12 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 92704..92937 | PHAGE_Cronob_vB_CsaM_GAP32: acyl carrier protein; SP670_0115; phage(gi414087077) | 4e-07 | Click |
| 2 | 92980..93273 | PROPHAGE_Strept_2603V/R: IS1381 transposase protein B; SP670_0116; phage(gi22537127) | 1e-42 | Click |
| 3 | 93476..93706 | hypothetical protein; SP670_0117 | N/A | Click |
| 4 | 93709..93834 | hypothetical protein; SP670_0118 | N/A | Click |
| 5 | complement(94281..94394) | chlorohydrolase; SP670_0119 | N/A | Click |
| 6 | 94421..96574 | PHAGE_Bacill_SPBc2: ABC transporter; SP670_0120; phage(gi9630145) | 9e-82 | Click |
| 7 | 96587..97936 | PHAGE_Celeri_P12053L: putative phage tail fiber protein; SP670_0121; phage(gi399528893) | 5e-05 | Click |
| 8 | 98106..98813 | PHAGE_Synech_S_ShM2: phosphoribosylaminoimidazole-succinocarboxamide synthase; SP670_0122; phage(gi326782410) | 3e-43 | Click |
| 9 | 99015..102740 | PHAGE_Microb_Min1: putative phosphoribosyl formylglycinamidine (FGAM) synthase II; SP670_0123; phage(gi149882852) | 1e-41 | Click |
| 10 | 102833..104275 | PHAGE_Parame_FR483: hypothetical protein FR483_N035R; SP670_0124; phage(gi155370133) | 1e-20 | Click |
| 11 | 104312..105334 | PHAGE_Synech_S_SKS1: glycinamide ribonucleotide formyltransferase; SP670_0125; phage(gi472340860) | 9e-65 | Click |
| 12 | 105331..105876 | PHAGE_Synech_S_SKS1: cyanobacterial phosphoribosylglycinamide formyltransferase; SP670_0126; phage(gi472340960) | 3e-25 | Click |
Region 4, total : 63 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1989782..1990039) | PHAGE_Strept_PH15: hypothetical protein phiPH15_gp60; SP670_2132; phage(gi190151475) | 3e-22 | Click |
| 2 | 1990207..1990218 | attL CAAACAAAAAAA | N/A | Click |
| 3 | complement(1990271..1991227) | PHAGE_Strept_MM1: N-acetylmuramoyl-L-alanine amidase; SP670_2133; phage(gi15088793) | 0.0 | Click |
| 4 | complement(1991227..1991562) | PHAGE_Strept_MM1: putative holin 2; SP670_2134; phage(gi15088792) | 1e-42 | Click |
| 5 | complement(1991566..1991865) | PHAGE_Bacill_Finn: hypothetical protein; SP670_2135; phage(gi460042205) | 3e-06 | Click |
| 6 | complement(1991874..1992224) | PHAGE_Strept_SMP: hypothetical protein; SP670_2136; phage(gi119953750) | 2e-43 | Click |
| 7 | complement(1992227..1992430) | PHAGE_Strept_SMP: hypothetical protein; SP670_2137; phage(gi119953749) | 9e-08 | Click |
| 8 | complement(1992411..1992527) | PHAGE_Strept_PH10: hypothetical protein PH10_gp46; SP670_2138; phage(gi238821363) | 1e-09 | Click |
| 9 | complement(1992524..1999804) | PHAGE_Strept_SM1: PblB; SP670_2139; phage(gi32469426) | 1e-108 | Click |
| 10 | complement(1999809..2000159) | PHAGE_Brocho_BL3: gp18; SP670_2140; phage(gi327409410) | 9e-29 | Click |
| 11 | complement(2000168..2003821) | PHAGE_Lactoc_712: tail tape measure; SP670_2141; phage(gi115315588) | 2e-33 | Click |
| 12 | complement(2003808..2004158) | hypothetical protein; SP670_2142 | N/A | Click |
| 13 | complement(2004197..2004577) | PHAGE_Lactob_Lj965: hypothetical protein Ljo_0320; SP670_2143; phage(gi41179250) | 9e-10 | Click |
| 14 | complement(2004582..2004995) | PHAGE_Lactob_Lj965: putative major tail protein; SP670_2144; phage(gi41179249) | 6e-11 | Click |
| 15 | complement(2004998..2005366) | PHAGE_Bacill_phIS3501: phage protein; SP670_2145; phage(gi422934335) | 2e-09 | Click |
| 16 | complement(2005363..2005689) | PHAGE_Brocho_BL3: gp12; SP670_2146; phage(gi327409402) | 1e-13 | Click |
| 17 | complement(2005853..2006191) | hypothetical protein; SP670_2147 | N/A | Click |
| 18 | complement(2006485..2006673) | hypothetical protein; SP670_2148 | N/A | Click |
| 19 | complement(2006663..2006845) | hypothetical protein; SP670_2149 | N/A | Click |
| 20 | complement(2006857..2007699) | PHAGE_Strept_5093: major head protein; SP670_2150; phage(gi238801899) | 2e-106 | Click |
| 21 | complement(2007705..2008289) | PHAGE_Strept_6: hypothetical protein SpyM3_1430; SP670_2151; phage(gi28876460) | 1e-27 | Click |
| 22 | complement(2008516..2008767) | PHAGE_Strept_SMP: hypothetical protein; SP670_2152; phage(gi119953783) | 5e-38 | Click |
| 23 | complement(2008769..2009032) | PHAGE_Clostr_phiCP26F: hypothetical protein; SP670_2153; phage(gi422933951) | 2e-18 | Click |
| 24 | complement(2009075..2009488) | PHAGE_Salmon_PVP_SE1: hypothetical protein; SP670_2154; phage(gi363539742) | 1e-26 | Click |
| 25 | complement(2009485..2009694) | hypothetical protein; SP670_2155 | N/A | Click |
| 26 | complement(2009696..2011279) | PHAGE_Clostr_phiC2: putative head morphogenesis protein; SP670_2156; phage(gi134287339) | 2e-42 | Click |
| 27 | complement(2011242..2012543) | PHAGE_Entero_phiFL3A: portal protein; SP670_2157; phage(gi281416257) | 3e-59 | Click |
| 28 | complement(2012723..2014021) | PHAGE_Strept_SMP: terminase large subunit; SP670_2158; phage(gi119953777) | 4e-152 | Click |
| 29 | complement(2013999..2014478) | PHAGE_Strept_P9: terminase small subunit; SP670_2159; phage(gi157311160) | 1e-46 | Click |
| 30 | complement(2014745..2014828) | tRNA | N/A | Click |
| 31 | complement(2014913..2015335) | PHAGE_Strept_3: hypothetical protein SpyM3_1124; SP670_2160; phage(gi28876294) | 2e-24 | Click |
| 32 | complement(2015767..2016141) | PHAGE_Strept_PH10: hypothetical protein PH10_gp19; SP670_2161; phage(gi238821336) | 1e-45 | Click |
| 33 | complement(2016515..2016865) | PHAGE_Strept_MM1: hypothetical protein MM1p26; SP670_2162; phage(gi15088767) | 2e-30 | Click |
| 34 | complement(2016925..2017098) | PHAGE_Strept_MM1: hypothetical protein MM1p25; SP670_2163; phage(gi15088766) | 2e-25 | Click |
| 35 | complement(2017098..2017307) | PHAGE_Strept_1: hypothetical protein EJ-1p27; SP670_2164; phage(gi39653701) | 2e-24 | Click |
| 36 | complement(2017308..2017979) | PHAGE_Strept_MM1: hypothetical protein MM1p23; SP670_2165; phage(gi15088764) | 3e-66 | Click |
| 37 | complement(2017969..2018298) | PHAGE_Strept_MM1: hypothetical protein MM1p22; SP670_2166; phage(gi15088763) | 2e-56 | Click |
| 38 | complement(2018343..2018765) | PHAGE_Strept_TP_J34: hypothetical protein; SP670_2167; phage(gi444475899) | 3e-50 | Click |
| 39 | complement(2018809..2019237) | PHAGE_Strept_M102: hypothetical protein M102_gp36; SP670_2168; phage(gi242345607) | 3e-34 | Click |
| 40 | complement(2019234..2019563) | PHAGE_Strept_SMP: hypothetical protein; SP670_2169; phage(gi119953763) | 2e-07 | Click |
| 41 | complement(2019577..2019786) | hypothetical protein; SP670_2170 | N/A | Click |
| 42 | complement(2019752..2020258) | PHAGE_Strept_2: putative DNA methyltransferase; SP670_2171; phage(gi28876237) | 7e-56 | Click |
| 43 | complement(2020268..2020684) | PHAGE_Strept_SMP: single-strand binding protein; SP670_2172; phage(gi119953767) | 3e-33 | Click |
| 44 | complement(2020681..2020797) | hypothetical protein; SP670_2173 | N/A | Click |
| 45 | complement(2021107..2021595) | hypothetical protein; SP670_2174 | N/A | Click |
| 46 | complement(2021598..2022638) | PHAGE_Strept_M102: hypothetical protein M102_gp28; SP670_2175; phage(gi242345599) | 7e-79 | Click |
| 47 | complement(2022648..2023466) | PHAGE_Strept_M102: hypothetical protein M102_gp27; SP670_2176; phage(gi242345598) | 4e-45 | Click |
| 48 | complement(2023589..2023750) | PHAGE_Strept_1: hypothetical protein EJ-1p18; SP670_2177; phage(gi39653692) | 6e-05 | Click |
| 49 | complement(2023743..2023997) | hypothetical protein; SP670_2178 | N/A | Click |
| 50 | complement(2023990..2024193) | hypothetical protein; SP670_2179 | N/A | Click |
| 51 | complement(2024193..2024354) | hypothetical protein; SP670_2180 | N/A | Click |
| 52 | complement(2024426..2025142) | PHAGE_Strept_TP_J34: putative antirepressor; SP670_2181; phage(gi444475880) | 5e-103 | Click |
| 53 | complement(2025166..2025369) | hypothetical protein; SP670_2182 | N/A | Click |
| 54 | complement(2026054..2026260) | PHAGE_Staphy_29: ORF049; SP670_2183; phage(gi66396236) | 7e-10 | Click |
| 55 | 2026399..2026572 | PHAGE_Staphy_EW: ORF065; SP670_2184; phage(gi66395858) | 3e-19 | Click |
| 56 | complement(2026565..2026735) | PHAGE_Staphy_phiETA: hypothetical protein phiETA_08; SP670_2185; phage(gi17426236) | 6e-09 | Click |
| 57 | complement(2027270..2027392) | PHAGE_Strept_SM1: gp13; SP670_2186; phage(gi32469444) | 2e-07 | Click |
| 58 | complement(2027469..2027744) | PHAGE_Strept_1: hypothetical protein EJ-1p05; SP670_2187; phage(gi39653679) | 2e-45 | Click |
| 59 | 2027906..2028673 | PHAGE_Strept_SMP: putative repressor; SP670_2188; phage(gi119953755) | 6e-33 | Click |
| 60 | complement(2028811..2028981) | hypothetical protein; SP670_2189 | N/A | Click |
| 61 | 2028906..2028917 | attR CAAACAAAAAAA | N/A | Click |
| 62 | 2029057..2030502 | PHAGE_Lister_A118: putative integrase; SP670_2190; phage(gi16798814) | 5e-72 | Click |
| 63 | complement(2030584..2031456) | competence protein CglB; SP670_2191 | N/A | Click |
| 64 | complement(2031548..2032489) | putative ABC transporter subunit ComYA; SP670_2192 | N/A | Click |
| 65 | complement(2032565..2032930) | hypothetical protein; SP670_2193 | N/A | Click |
| 66 | complement(2033081..2034139) | PHAGE_Synech_S_SM2: zinc-containing alcohol dehydrogenase superfamily protein; SP670_2194; phage(gi326781942) | 4e-16 | Click |