Definition Clostridium cellulovorans 743B chromosome, complete genome.
Accession NC_014393
Length 5,262,222
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 58 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 925420..925438  attL    GGGTGTACATTTTTTTCTT  N/A  Click
2 925428..925458  attL    ATTTTTTTCTTGGGGTGTGCACTTTTTAGCG  N/A  Click
3 934415..935752  PHAGE_Ostreo_2: putative cytosine-specific methyltransferase; Clocel_0751; phage(gi314055145)  1e-24  Click
4 complement(935770..936714)  hypothetical protein; Clocel_0752  N/A  Click
5 937034..937984  hypothetical protein; Clocel_0753  N/A  Click
6 complement(938113..939399)  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp38; Clocel_0754; phage(gi209901275)  3e-06  Click
7 complement(939498..939920)  PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; Clocel_0755; phage(gi397912657)  3e-06  Click
8 940066..940266  helix-turn-helix domain-containing protein; Clocel_0756  N/A  Click
9 940346..940573  helix-turn-helix domain-containing protein; Clocel_0757  N/A  Click
10 940574..940921  PHAGE_Bacill_PBC1: hypothetical protein; Clocel_0758; phage(gi389060349)  6e-09  Click
11 940921..942087  PHAGE_Staphy_3A: ORF012; Clocel_0759; phage(gi66395600)  1e-86  Click
12 942089..942628  PHAGE_Staphy_SMSAP5: hypothetical protein; Clocel_0760; phage(gi422935814)  3e-54  Click
13 942641..944578  PHAGE_Strept_P9: polymerase; Clocel_0761; phage(gi157311150)  0.0  Click
14 944585..946957  PHAGE_Entero_phiFL4A: VirE domain protein; Clocel_0762; phage(gi281416460)  0.0  Click
15 947208..947486  PHAGE_Acyrth_1: hypothetical protein APSE-1_44; Clocel_0763; phage(gi9633591)  4e-18  Click
16 947483..948856  PHAGE_Entero_phiFL4A: DNA helicase; Clocel_0764; phage(gi281416462)  3e-161  Click
17 948890..949375  hypothetical protein; Clocel_0765  N/A  Click
18 949533..949883  PHAGE_Deep_s_D6E: transcriptional regulator; Clocel_0766; phage(gi423262353)  5e-05  Click
19 949885..950718  hypothetical protein; Clocel_0767  N/A  Click
20 950735..951376  PHAGE_Campyl_CP30A: putative DEAD/DEAH box helicase; Clocel_0768; phage(gi410493086)  9e-05  Click
21 951614..951820  hypothetical protein; Clocel_0769  N/A  Click
22 951789..952181  PHAGE_Bacill_phIS3501: HNH endonuclease domain protein; Clocel_0770; phage(gi422934326)  1e-18  Click
23 952256..952756  PHAGE_Synech_S_CBS4: HNH endonuclease; Clocel_0771; phage(gi374531759)  4e-14  Click
24 952968..954221  PHAGE_Lactob_Lj771: putative adenine methyltransferase; Clocel_0772; phage(gi163932178)  7e-70  Click
25 954214..955560  PHAGE_Clostr_phiMMP02: DNA-cytosine methyltransferase; Clocel_0773; phage(gi414090431)  6e-108  Click
26 955628..956401  hypothetical protein; Clocel_0774  N/A  Click
27 956551..957459  Putative amidoligase enzyme; Clocel_0775  N/A  Click
28 957562..958188  AIG2 family protein; Clocel_0776  N/A  Click
29 958249..958719  PHAGE_Burkho_phi1026b: gp1; Clocel_0777; phage(gi38707891)  7e-18  Click
30 958724..960268  PHAGE_Nocard_NBR1: terminase large subunit; Clocel_0778; phage(gi372217589)  3e-86  Click
31 960333..961328  hypothetical protein; Clocel_0779  N/A  Click
32 961402..962676  PHAGE_Salmon_ST64B: Portal Protein; Clocel_0780; phage(gi23505449)  5e-77  Click
33 962624..963265  PHAGE_Geobac_GBSV1: phage prohead; Clocel_0781; phage(gi115334629)  6e-28  Click
34 963278..964555  PHAGE_Bacill_1: Phage capsid protein; Clocel_0782; phage(gi155042936)  7e-10  Click
35 964566..964985  hypothetical protein; Clocel_0783  N/A  Click
36 965101..965838  NERD domain-containing protein; Clocel_0784  N/A  Click
37 965932..966207  PHAGE_Bacill_phIS3501: phage DNA packaging protein; Clocel_0785; phage(gi422934332)  8e-06  Click
38 966182..966538  PHAGE_Geobac_E2: putative head-tail adaptor; Clocel_0786; phage(gi148747735)  8e-20  Click
39 966531..966923  PHAGE_Bacill_phIS3501: gp10 family phage protein; Clocel_0787; phage(gi422934334)  3e-17  Click
40 966920..967249  PHAGE_Bacill_phIS3501: phage protein; Clocel_0788; phage(gi422934335)  3e-10  Click
41 967257..967826  PHAGE_Bacill_phIS3501: phage major tail protein; Clocel_0789; phage(gi422934336)  1e-28  Click
42 967990..968742  hypothetical protein; Clocel_0790  N/A  Click
43 968872..969195  hypothetical protein; Clocel_0791  N/A  Click
44 969402..971669  PHAGE_Geobac_E2: putative tail tape measure protein; Clocel_0792; phage(gi148747742)  6e-50  Click
45 971677..972372  PHAGE_Clostr_phiSM101: hypothetical protein; Clocel_0793; phage(gi110804045)  3e-34  Click
46 972422..972667  hypothetical protein; Clocel_0794  N/A  Click
47 972683..972868  hypothetical protein; Clocel_0795  N/A  Click
48 972880..976371  PHAGE_Clostr_phiCTP1: hypothetical phage structural protein; Clocel_0796; phage(gi304360688)  1e-79  Click
49 976458..976868  PHAGE_Bacill_phIS3501: holin; Clocel_0797; phage(gi422934342)  6e-26  Click
50 976861..977559  PHAGE_Bacill_BCD7: putative cell wall hydrolase/autolysin; Clocel_0798; phage(gi422936032)  4e-27  Click
51 977680..978105  PHAGE_Cronob_vB_CsaM_GAP32: HNH endonuclease; Clocel_0799; phage(gi414087292)  8e-06  Click
52 978098..978253  hypothetical protein; Clocel_0800  N/A  Click
53 978317..979621  PHAGE_Bacill_phBC6A51: Site-specific recombinase; Clocel_0801; phage(gi31415812)  2e-29  Click
54 979624..981213  PHAGE_Bacill_WBeta: putative site-specific recombinase; Clocel_0802; phage(gi85701406)  3e-29  Click
55 981469..981723  hypothetical protein; Clocel_0803  N/A  Click
56 981736..982233  hypothetical protein; Clocel_0804  N/A  Click
57 982599..983534  peptidase C14 caspase catalytic subunit p20; Clocel_0805  N/A  Click
58 983531..985777  hypothetical protein; Clocel_0806  N/A  Click
59 986204..987937  PHAGE_Staphy_phiPVL108: putative transposase; Clocel_0807; phage(gi119443708)  2e-15  Click
60 988052..988082  attR    ATTTTTTTCTTGGGGTGTGCACTTTTTAGCG  N/A  Click
61 complement(988400..989266)  PROPHAGE_Escher_CFT073: transposase insF; Clocel_0808; phage(gi26249410)  2e-41  Click
62 990106..990124  attR    GGGTGTACATTTTTTTCTT  N/A  Click
Region 2, total : 36 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2861082..2861098  attL    TGACCCCTAGGAGAATC  N/A  Click
2 2863802..2863813  attL    TCTTGATTTTTA  N/A  Click
3 complement(2872802..2874082)  PHAGE_Clostr_st: metallo beta-lactamase family protein; Clocel_2423; phage(gi80159792)  3e-07  Click
4 complement(2874754..2875668)  PHAGE_Bacill_SPBc2: N-acetylmuramoyl-L-alanine amidase; Clocel_2424; phage(gi9630151)  9e-16  Click
5 complement(2875710..2876150)  PHAGE_Bacill_WBeta: phage holin; Clocel_2425; phage(gi85701395)  2e-23  Click
6 complement(2876211..2877230)  PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; Clocel_2426; phage(gi326536865)  3e-13  Click
7 complement(2877234..2878337)  PHAGE_Clostr_phiCD6356: hypothetical protein; Clocel_2427; phage(gi326536864)  4e-45  Click
8 complement(2878341..2879201)  PHAGE_Clostr_phiCD6356: putative phage tail protein; Clocel_2428; phage(gi326536863)  1e-29  Click
9 complement(2879265..2881715)  PHAGE_Geobac_E2: putative tail tape measure protein; Clocel_2429; phage(gi148747742)  3e-65  Click
10 complement(2881933..2882313)  PHAGE_Geobac_E2: hypothetical protein GBVE2_gp013; Clocel_2430; phage(gi148747740)  1e-13  Click
11 complement(2882336..2882890)  PHAGE_Geobac_E2: putative major capsid protein; Clocel_2431; phage(gi148747739)  3e-52  Click
12 complement(2882906..2883232)  PHAGE_Geobac_E2: hypothetical protein GBVE2_gp011; Clocel_2432; phage(gi148747738)  2e-27  Click
13 complement(2883234..2883614)  PHAGE_Geobac_E2: hypothetical protein GBVE2_gp010; Clocel_2433; phage(gi148747737)  9e-26  Click
14 complement(2883617..2883913)  PHAGE_Bacill_1: hypothetical protein BV1_gp25; Clocel_2434; phage(gi158348414)  9e-21  Click
15 complement(2883903..2884178)  hypothetical protein; Clocel_2435  N/A  Click
16 complement(2884283..2885341)  hypothetical protein; Clocel_2436  N/A  Click
17 complement(2885499..2886701)  PHAGE_Geobac_GBSV1: phage major capsid protein; Clocel_2437; phage(gi115334630)  3e-09  Click
18 complement(2886722..2887321)  PHAGE_Clostr_phi3626: putative prohead protease; Clocel_2438; phage(gi20065968)  1e-55  Click
19 complement(2887281..2888483)  PHAGE_Clostr_phiMMP04: phage portal protein; Clocel_2439; phage(gi414090444)  5e-134  Click
20 complement(2888499..2890157)  PHAGE_Clostr_phiMMP04: terminase; Clocel_2440; phage(gi414090443)  0.0  Click
21 complement(2890154..2890525)  PHAGE_Clostr_phiMMP04: hypothetical protein; Clocel_2441; phage(gi414090493)  9e-29  Click
22 complement(2890615..2890953)  PHAGE_Clostr_phiMMP04: HNH endonuclease; Clocel_2442; phage(gi414090491)  3e-14  Click
23 complement(2890971..2891285)  hypothetical protein; Clocel_2443  N/A  Click
24 complement(2891416..2891604)  hypothetical protein; Clocel_2444  N/A  Click
25 complement(2891814..2892416)  PHAGE_Clostr_phiMMP04: integrase; Clocel_2445; phage(gi414090489)  8e-69  Click
26 2892662..2892892  hypothetical protein; Clocel_2446  N/A  Click
27 2893292..2893453  hypothetical protein; Clocel_2447  N/A  Click
28 complement(2893636..2894391)  PHAGE_Clostr_phiSM101: putative modification methylase dpniia; Clocel_2448; phage(gi110804053)  7e-117  Click
29 complement(2894623..2895000)  hypothetical protein; Clocel_2449  N/A  Click
30 complement(2895019..2895177)  hypothetical protein; Clocel_2450  N/A  Click
31 complement(2895207..2896493)  PHAGE_Strept_1: putative DNA polymerase III delta prime subunit; Clocel_2451; phage(gi28876155)  9e-65  Click
32 complement(2896515..2897387)  PHAGE_Strept_7201: ORF4; Clocel_2452; phage(gi9634630)  5e-18  Click
33 complement(2897604..2897909)  hypothetical protein; Clocel_2453  N/A  Click
34 complement(2897924..2898199)  hypothetical protein; Clocel_2454  N/A  Click
35 2898267..2898278  attR    TCTTGATTTTTA  N/A  Click
36 complement(2898284..2898508)  PHAGE_Clostr_phiCD27: putative phage repressor; Clocel_2455; phage(gi209901282)  3e-14  Click
37 2898690..2899049  PHAGE_Clostr_phiCD27: putative phage repressor; Clocel_2456; phage(gi209901281)  3e-19  Click
38 2899071..2899550  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp43; Clocel_2457; phage(gi209901280)  2e-31  Click
39 2899577..2900752  PHAGE_Clostr_phiC2: putative integrase; Clocel_2458; phage(gi134287379)  2e-28  Click
40 2900934..2900950  attR    TGACCCCTAGGAGAATC  N/A  Click
Region 3, total : 30 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(4297810..4298676)  PHAGE_Clostr_phiSM101: putative ATPase; Clocel_3521; phage(gi110804060)  2e-27  Click
2 complement(4298873..4300114)  hypothetical protein; Clocel_3522  N/A  Click
3 complement(4300312..4301169)  PHAGE_Bacill_phiAGATE: putative N-acetylmuramoyl-L-alanine amidase; Clocel_3523; phage(gi448260867)  1e-20  Click
4 complement(4301175..4301357)  hypothetical protein; Clocel_3524  N/A  Click
5 complement(4301369..4301686)  PHAGE_Phthor_granulovirus: hypothetical protein; Clocel_3525; phage(gi21686711)  7e-05  Click
6 complement(4301662..4302066)  hypothetical protein; Clocel_3526  N/A  Click
7 complement(4302121..4302552)  PHAGE_Prochl_P_HM2: baseplate wedge initiator; Clocel_3527; phage(gi326783058)  1e-07  Click
8 complement(4302646..4303017)  PHAGE_Ralsto_phiRSA1: phage tail collar protein; Clocel_3528; phage(gi145708098)  3e-14  Click
9 complement(4303072..4303626)  hypothetical protein; Clocel_3529  N/A  Click
10 complement(4303682..4305385)  PHAGE_Clostr_phiCD38_2: tail fiber protein; Clocel_3530; phage(gi333798127)  7e-05  Click
11 complement(4305390..4307825)  PHAGE_Clostr_O: endopeptidase-endolysin; Clocel_3531; phage(gi208429880)  8e-106  Click
12 complement(4307835..4308542)  PHAGE_Clostr_phiCP26F: putative phage tail component; Clocel_3532; phage(gi422933966)  4e-15  Click
13 complement(4308548..4311382)  PHAGE_Clostr_phiCD38_2: tail tape measure; Clocel_3533; phage(gi333798123)  1e-99  Click
14 complement(4311445..4312044)  PHAGE_Clostr_phiCD38_2: hypothetical protein; Clocel_3534; phage(gi333798121)  5e-61  Click
15 complement(4312044..4312385)  PHAGE_Clostr_phiCD38_2: hypothetical protein; Clocel_3535; phage(gi333798120)  5e-20  Click
16 complement(4312400..4313056)  PHAGE_Clostr_phiCD38_2: hypothetical protein; Clocel_3536; phage(gi333798119)  2e-21  Click
17 complement(4313062..4313490)  PHAGE_Clostr_phiCD38_2: hypothetical protein; Clocel_3537; phage(gi333798118)  1e-36  Click
18 complement(4313487..4313846)  PHAGE_Clostr_phiCD38_2: hypothetical protein; Clocel_3538; phage(gi333798117)  2e-20  Click
19 complement(4313848..4314261)  PHAGE_Clostr_phiCD38_2: hypothetical protein; Clocel_3539; phage(gi333798116)  5e-22  Click
20 complement(4314275..4314565)  hypothetical protein; Clocel_3540  N/A  Click
21 complement(4314574..4314837)  hypothetical protein; Clocel_3541  N/A  Click
22 complement(4314883..4315827)  PHAGE_Clostr_CD119: putative capsid protein; Clocel_3542; phage(gi90592716)  5e-72  Click
23 complement(4315861..4316454)  PHAGE_Staphy_96: ORF019; Clocel_3543; phage(gi66395904)  5e-15  Click
24 complement(4316577..4316771)  hypothetical protein; Clocel_3544  N/A  Click
25 complement(4316820..4317284)  PHAGE_Bacill_BMBtp2: hypothetical protein; Clocel_3545; phage(gi431809501)  2e-11  Click
26 complement(4317354..4317536)  hypothetical protein; Clocel_3546  N/A  Click
27 complement(4317536..4318969)  PHAGE_Lactob_Lj771: minor head protein; Clocel_3547; phage(gi163932184)  5e-23  Click
28 complement(4319115..4320440)  PHAGE_Deep_s_D6E: portal protein; Clocel_3548; phage(gi423262330)  5e-26  Click
29 complement(4320455..4322200)  PHAGE_Bacill_phBC6A51: hypothetical protein BC1891; Clocel_3549; phage(gi31415785)  3e-15  Click
30 complement(4322274..4323074)  PHAGE_Staphy_phiETA3: anti-repressor protein; Clocel_3550; phage(gi122891792)  2e-20  Click
Region 4, total : 26 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4323264..4323275  attL    CATTTGTTAATA  N/A  Click
2 complement(4333379..4334002)  PHAGE_Strept_Dp_1: hypothetical protein; Clocel_3565; phage(gi327198335)  5e-29  Click
3 complement(4334015..4334983)  PHAGE_Lister_B054: gp50; Clocel_3566; phage(gi157325334)  2e-43  Click
4 complement(4334983..4335150)  hypothetical protein; Clocel_3567  N/A  Click
5 complement(4336256..4336558)  hypothetical protein; Clocel_3569  N/A  Click
6 complement(4336555..4337028)  PHAGE_Bacill_L: gp38; Clocel_3570; phage(gi216906003)  2e-17  Click
7 complement(4337045..4337635)  hypothetical protein; Clocel_3571  N/A  Click
8 complement(4337622..4337870)  PHAGE_Bacill_phBC6A51: Transcription state regulatory protein abrB; Clocel_3572; phage(gi31415778)  5e-12  Click
9 complement(4337873..4337986)  hypothetical protein; Clocel_3573  N/A  Click
10 complement(4338194..4338748)  hypothetical protein; Clocel_3574  N/A  Click
11 complement(4338750..4338983)  hypothetical protein; Clocel_3575  N/A  Click
12 complement(4338976..4339128)  PHAGE_Clostr_phi3626: Gp38 protein; Clocel_3576; phage(gi20066001)  9e-05  Click
13 complement(4339125..4339226)  hypothetical protein; Clocel_3577  N/A  Click
14 complement(4339216..4340505)  PHAGE_Entero_ES18: gp53; Clocel_3578; phage(gi62362266)  4e-64  Click
15 complement(4340624..4340899)  hypothetical protein; Clocel_3579  N/A  Click
16 complement(4340924..4341685)  PHAGE_Lister_A006: gp36; Clocel_3580; phage(gi157325452)  2e-86  Click
17 4341777..4341983  hypothetical protein; Clocel_3581  N/A  Click
18 complement(4341934..4342245)  hypothetical protein; Clocel_3582  N/A  Click
19 complement(4342248..4343291)  PHAGE_Ectoca_1: EsV-1-117; Clocel_3583; phage(gi13242588)  3e-11  Click
20 complement(4343302..4343997)  PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp72; Clocel_3584; phage(gi90592708)  2e-29  Click
21 complement(4343998..4344120)  hypothetical protein; Clocel_3585  N/A  Click
22 complement(4344093..4344308)  PHAGE_Clostr_PhiS63: gp26; Clocel_3586; phage(gi388570655)  7e-05  Click
23 4344503..4344859  PHAGE_Clostr_PhiS63: gp26; Clocel_3587; phage(gi388570671)  5e-13  Click
24 4345038..4345049  attR    CATTTGTTAATA  N/A  Click
25 4345163..4346248  PHAGE_Clostr_phi3626: putative integrase; Clocel_3588; phage(gi20065985)  2e-25  Click
26 complement(4346311..4346403)  NUDIX hydrolase; Clocel_3589  N/A  Click
27 complement(4346601..4347167)  NUDIX hydrolase; Clocel_3590  N/A  Click
28 complement(4347459..4349120)  PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; Clocel_3591; phage(gi9631364)  3e-06  Click
Region 5, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(4782362..4783948)  PHAGE_Bacill_Fah: site-specific serine recombinase; Clocel_3956; phage(gi89152504)  1e-29  Click
2 complement(4783933..4785438)  PHAGE_Clostr_phiCD27: putative phage site-specific recombinase; Clocel_3957; phage(gi209901279)  1e-24  Click
3 complement(4785473..4785658)  hypothetical protein; Clocel_3958  N/A  Click
4 complement(4785651..4786061)  Sigma-70 region 4 type 2; Clocel_3959  N/A  Click
5 complement(4786268..4787734)  PHAGE_Bacill_BCD7: putative cell wall hydrolase/autolysin; Clocel_3960; phage(gi422936020)  5e-27  Click
6 complement(4787736..4788146)  PHAGE_Bacill_Fah: holin; Clocel_3961; phage(gi89152494)  8e-26  Click
7 complement(4788220..4790691)  glycoside hydrolase family 18; Clocel_3962  N/A  Click
8 complement(4790691..4791296)  hypothetical protein; Clocel_3963  N/A  Click
9 complement(4791268..4791465)  hypothetical protein; Clocel_3964  N/A  Click
10 complement(4791480..4794005)  PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp32; Clocel_3965; phage(gi158267613)  8e-34  Click
11 complement(4794009..4794785)  PHAGE_Bacill_IEBH: putative tail component; Clocel_3966; phage(gi197261573)  2e-09  Click
12 complement(4794798..4797410)  PHAGE_Strept_5: putative platlet-binding protein, minor tail fiber protein; Clocel_3967; phage(gi28876395)  2e-69  Click
13 complement(4797431..4797607)  hypothetical protein; Clocel_3968  N/A  Click
14 complement(4797619..4797999)  hypothetical protein; Clocel_3969  N/A  Click
15 complement(4798019..4798618)  PHAGE_Bacill_Fah: major tail protein; Clocel_3970; phage(gi89152489)  5e-17  Click
16 complement(4798621..4798962)  hypothetical protein; Clocel_3971  N/A  Click
17 complement(4798959..4799390)  PHAGE_Bacill_BtCS33: head-tail joining protein; Clocel_3972; phage(gi392972717)  2e-07  Click
18 complement(4799383..4799715)  head-tail joining family protein; Clocel_3973  N/A  Click
19 complement(4799717..4800028)  hypothetical protein; Clocel_3974  N/A  Click
20 complement(4800046..4801224)  PHAGE_Salmon_ST64B: Major capsid protein precursor; Clocel_3975; phage(gi23505451)  2e-35  Click
21 complement(4801237..4802010)  PHAGE_Geobac_E2: putative Clp peptidase; Clocel_3976; phage(gi148747731)  2e-47  Click
22 complement(4801904..4803265)  PHAGE_Burkho_2: gp4, phage portal protein, HK97 family; Clocel_3977; phage(gi134288632)  2e-78  Click
23 complement(4803284..4804885)  PHAGE_Nocard_NBR1: terminase large subunit; Clocel_3978; phage(gi372217589)  2e-82  Click