Definition Thermosediminibacter oceani DSM 16646 chromosome, complete genome.
Accession NC_014377
Length 2,280,035
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1233246..1233257  attL    GGCTTATAAATT  N/A  Click
2 complement(1238096..1238995)  PHAGE_Thermu_26: phage XerD-like integrase; Toce_1271; phage(gi157265417)  3e-22  Click
3 complement(1239042..1239668)  stage II sporulation protein M; Toce_1272  N/A  Click
4 complement(1239729..1240901)  PHP domain protein; Toce_1273  N/A  Click
5 complement(1240901..1241443)  PHAGE_Lactob_LP65: hypothetical protein LP65_gp086; Toce_1274; phage(gi56693134)  3e-15  Click
6 complement(1241386..1242537)  hypothetical protein; Toce_1275  N/A  Click
7 complement(1242559..1243347)  hypothetical protein; Toce_1276  N/A  Click
8 complement(1243358..1244071)  hypothetical protein; Toce_1277  N/A  Click
9 complement(1244083..1245210)  Thiamin pyrophosphokinase catalytic region; Toce_1278  N/A  Click
10 complement(1245337..1246812)  PHAGE_Staphy_phiPV83: transposase; Toce_1279; phage(gi9635722)  2e-18  Click
11 complement(1246936..1247766)  PHAGE_Deep_s_D6E: capsid protein; Toce_1280; phage(gi423262332)  3e-83  Click
12 complement(1247790..1248392)  PHAGE_Deep_s_D6E: scaffold protein; Toce_1281; phage(gi423262331)  1e-30  Click
13 complement(1248570..1249451)  PHAGE_Clostr_CD119: putative head protein; Toce_1282; phage(gi90592642)  4e-28  Click
14 complement(1249444..1250721)  PHAGE_Deep_s_D6E: portal protein; Toce_1283; phage(gi423262330)  1e-39  Click
15 complement(1250739..1252526)  PHAGE_Haemop_SuMu: terminase; Toce_1284; phage(gi418489081)  1e-14  Click
16 complement(1253070..1253462)  hypothetical protein; Toce_1285  N/A  Click
17 complement(1253729..1253935)  hypothetical protein; Toce_1286  N/A  Click
18 complement(1254005..1254784)  hypothetical protein; Toce_1287  N/A  Click
19 1254820..1254831  attL    AATAAAAAAAGC  N/A  Click
20 1255497..1256726  PROPHAGE_Escher_CFT073: transposase; Toce_1289; phage(gi26248360)  3e-42  Click
21 1256723..1257493  PROPHAGE_Escher_CFT073: transposase/IS protein; Toce_1290; phage(gi26248359)  9e-50  Click
22 1258899..1258910  attL    ATATTCCTCCTT  N/A  Click
23 complement(1258941..1259111)  hypothetical protein; Toce_1291  N/A  Click
24 complement(1259160..1259615)  hypothetical protein; Toce_1292  N/A  Click
25 1259653..1259664  attL    AAAAAATAAAAA  N/A  Click
26 complement(1259777..1259935)  hypothetical protein; Toce_1293  N/A  Click
27 complement(1259928..1260119)  hypothetical protein; Toce_1294  N/A  Click
28 complement(1260311..1261513)  hypothetical protein; Toce_1295  N/A  Click
29 1261882..1263405  PROPHAGE_Escher_CFT073: transposase; Toce_1296; phage(gi26248360)  2e-11  Click
30 1263399..1264130  PROPHAGE_Escher_CFT073: transposase/IS protein; Toce_1297; phage(gi26248359)  2e-33  Click
31 1264607..1264618  attR    AAAAAATAAAAA  N/A  Click
32 complement(1264841..1265068)  hypothetical protein; Toce_1298  N/A  Click
33 complement(1265108..1266079)  PHAGE_Staphy_vB_SepiS_phiIPLA5: integrase; Toce_1299; phage(gi399528924)  1e-12  Click
34 1267055..1267066  attR    ATATTCCTCCTT  N/A  Click
35 1268482..1268493  attR    AATAAAAAAAGC  N/A  Click
36 1268501..1268512  attR    GGCTTATAAATT  N/A  Click
Region 2, total : 19 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1610223..1610235  attL    TCGGTTTTAGTTT  N/A  Click
2 1621054..1622214  PROPHAGE_Shewan_MR-1: ISSod13, transposase; Toce_1643; phage(gi24375047)  4e-10  Click
3 complement(1622193..1623266)  protein of unknown function DUF43; Toce_1644  N/A  Click
4 1623533..1625281  PHAGE_Bacill_SPBc2: ABC transporter; Toce_1645; phage(gi9630145)  4e-37  Click
5 1625298..1627373  PHAGE_Bacill_SPBc2: ABC transporter; Toce_1646; phage(gi9630145)  8e-38  Click
6 complement(1627524..1628333)  undecaprenol kinase; Toce_1647  N/A  Click
7 complement(1628336..1628977)  phosphoribosyltransferase; Toce_1648  N/A  Click
8 1629060..1629464  PHAGE_Anguil_1: nucleoside diphosphate kinase; Toce_1649; phage(gi387866117)  5e-33  Click
9 complement(1629467..1630501)  Quinolinate phosphoribosyl transferase; Toce_1650  N/A  Click
10 complement(1630530..1631045)  PHAGE_Entero_PRD1: transglycosylase; Toce_1651; phage(gi9626369)  3e-12  Click
11 complement(1631045..1631683)  dephospho-CoA kinase; Toce_1652  N/A  Click
12 complement(1631697..1634291)  PHAGE_Bacill_SP10: DNA polymerase; Toce_1653; phage(gi418489633)  7e-55  Click
13 1634472..1634837  PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; Toce_1654; phage(gi397912657)  2e-09  Click
14 complement(1634865..1635875)  Radical SAM domain protein; Toce_1655  N/A  Click
15 complement(1635844..1636680)  purine or other phosphorylase family 1; Toce_1656  N/A  Click
16 complement(1636828..1637460)  PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; Toce_1657; phage(gi9631364)  3e-10  Click
17 1637631..1637718  tRNA  N/A  Click
18 1637865..1638098  ATP/GTP binding protein; Toce_1658  N/A  Click
19 complement(1638150..1638839)  PHAGE_Vibrio_PWH3a_P1: hypothetical protein; Toce_1659; phage(gi472342447)  6e-08  Click
20 1638860..1638872  attR    TCGGTTTTAGTTT  N/A  Click
21 1638909..1639577  PHAGE_Salmon_epsilon34: GtrB; bactoprenol glucosyl transferase; Toce_1660; phage(gi221328638)  5e-12  Click
22 complement(1639623..1640438)  PHAGE_Mycoba_D29: gp59.2; Toce_1661; phage(gi9630445)  1e-14  Click