Definition | Clostridium saccharolyticum WM1 chromosome, complete genome. |
---|---|
Accession | NC_014376 |
Length | 4,662,871 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 7 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 622063..622989 | PHAGE_Salmon_ST160: GtrB; Closa_0551; phage(gi318065903) | 2e-40 | Click |
2 | 623003..623542 | PHAGE_Lactoc_bIL311: Orf17; Closa_0552; phage(gi13095675) | 2e-06 | Click |
3 | 623577..624680 | PHAGE_Bathyc_BpV1: hypothetical protein; Closa_0553; phage(gi313768026) | 3e-51 | Click |
4 | 624677..625165 | PHAGE_Entero_SfV: putative flippase; Closa_0554; phage(gi19549013) | 1e-08 | Click |
5 | complement(627064..627420) | PHAGE_Stx2_c_1717: transposase; Closa_0557; phage(gi209447152) | 2e-11 | Click |
6 | complement(627413..627757) | hypothetical protein; Closa_0558 | N/A | Click |
7 | complement(627949..629490) | PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; Closa_0559; phage(gi26989833) | 1e-90 | Click |
Region 2, total : 34 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 780271..781002 | PHAGE_Bacill_36: baseplate hub protein; Closa_0688; phage(gi156564128) | 1e-08 | Click |
2 | 781313..781576 | PHAGE_Megavi_chiliensis: hypothetical protein; Closa_0689; phage(gi363540151) | 2e-14 | Click |
3 | 781728..782036 | PHAGE_Ostreo_OlV1: hypothetical protein; Closa_0690; phage(gi313844185) | 1e-05 | Click |
4 | 782109..782657 | phosphodiesterase, MJ0936 family; Closa_0691 | N/A | Click |
5 | 782659..783828 | rRNA (guanine-N(2)-)-methyltransferase; Closa_0692 | N/A | Click |
6 | 783818..785203 | PHAGE_Choris_MNPV: cathepsin; Closa_0693; phage(gi37651368) | 4e-11 | Click |
7 | 785228..785863 | PHAGE_Uganda_virus: polyprotein; Closa_0694; phage(gi314998982) | 2e-10 | Click |
8 | 785841..786332 | phosphodiesterase, MJ0936 family; Closa_0695 | N/A | Click |
9 | 786570..787112 | PHAGE_Strept_1: lysozyme; Closa_0696; phage(gi9629549) | 2e-18 | Click |
10 | complement(789222..789404) | hypothetical protein; Closa_0698 | N/A | Click |
11 | complement(789536..791206) | peptidase S8 and S53 subtilisin kexin sedolisin; Closa_0699 | N/A | Click |
12 | 791507..792127 | NUDIX hydrolase; Closa_0700 | N/A | Click |
13 | complement(792335..792499) | hypothetical protein; Closa_0701 | N/A | Click |
14 | 792598..792613 | attL ATATTGATAGTTGGTA | N/A | Click |
15 | 793293..793805 | transcriptional regulator, CarD family; Closa_0702 | N/A | Click |
16 | complement(793927..794006) | tRNA | N/A | Click |
17 | 795393..795404 | attL GGGAGGCAGCAG | N/A | Click |
18 | 796918..796990 | tRNA | N/A | Click |
19 | 800352..800424 | tRNA | N/A | Click |
20 | complement(800539..801738) | PHAGE_Strept_6: putative integrase; Closa_0703; phage(gi28876488) | 6e-07 | Click |
21 | 802005..802127 | hypothetical protein; Closa_0704 | N/A | Click |
22 | complement(802135..802659) | PHAGE_Clostr_phiSM101: Helix-turn-helix domain protein; Closa_0705; phage(gi110804036) | 4e-12 | Click |
23 | 802790..802972 | hypothetical protein; Closa_0706 | N/A | Click |
24 | 803021..803182 | hypothetical protein; Closa_0707 | N/A | Click |
25 | 803223..803390 | hypothetical protein; Closa_0708 | N/A | Click |
26 | 803424..803591 | hypothetical protein; Closa_0709 | N/A | Click |
27 | complement(803604..803822) | hypothetical protein; Closa_0710 | N/A | Click |
28 | 803924..804277 | hypothetical protein; Closa_0711 | N/A | Click |
29 | 804280..804591 | hypothetical protein; Closa_0712 | N/A | Click |
30 | 804785..805567 | PHAGE_Clostr_PhiS63: gp31; Closa_0713; phage(gi388570658) | 1e-12 | Click |
31 | 805581..805811 | hypothetical protein; Closa_0714 | N/A | Click |
32 | 805808..806023 | hypothetical protein; Closa_0715 | N/A | Click |
33 | 806084..806530 | PHAGE_Entero_P1: pmgM; Closa_0716; phage(gi46401706) | 2e-14 | Click |
34 | 806527..807309 | PHAGE_Entero_EF62phi: chromosome partitioning ATPase; Closa_0717; phage(gi384519759) | 2e-08 | Click |
35 | 807310..808368 | PHAGE_Saimir_2: unnamed protein product; Closa_0718; phage(gi9626029) | 2e-06 | Click |
36 | 808378..808389 | attR GGGAGGCAGCAG | N/A | Click |
37 | 808497..809504 | PHAGE_Thermu_45: XerD-like integrase; Closa_0719; phage(gi157265299) | 3e-10 | Click |
38 | 809689..809841 | hypothetical protein; Closa_0720 | N/A | Click |
39 | 809834..810796 | PHAGE_Staphy_K: hypothetical protein KgORF28; Closa_0721; phage(gi48696419) | 7e-27 | Click |
40 | 811000..811677 | PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp66; Closa_0722; phage(gi90592702) | 6e-05 | Click |
41 | 815340..815355 | attR ATATTGATAGTTGGTA | N/A | Click |
Region 3, total : 35 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 810662..810675 | attL GCAGAAGCAGAGGC | N/A | Click |
2 | 815901..816695 | PHAGE_Lister_2389: methylase; Closa_0735; phage(gi17488539) | 2e-48 | Click |
3 | 816751..817101 | hypothetical protein; Closa_0736 | N/A | Click |
4 | 817325..817552 | hypothetical protein; Closa_0737 | N/A | Click |
5 | 817597..817998 | hypothetical protein; Closa_0738 | N/A | Click |
6 | 818192..818533 | PHAGE_Lister_2389: Gp54 protein; Closa_0739; phage(gi17488559) | 5e-17 | Click |
7 | 818717..819040 | PHAGE_Clostr_phiCD6356: putative terminase small subunit; Closa_0740; phage(gi326536848) | 4e-10 | Click |
8 | 819030..820712 | PHAGE_Lister_2389: terminase large subunit; Closa_0741; phage(gi17488505) | 9e-82 | Click |
9 | 820731..821909 | PHAGE_Lister_2389: hypothetical protein 2389gp03; Closa_0742; phage(gi17488506) | 3e-57 | Click |
10 | 821926..822684 | PHAGE_Lactob_JCL1032: putative ClpP protease; Closa_0743; phage(gi418489116) | 2e-29 | Click |
11 | 822689..823867 | PHAGE_Lister_2389: major capsid protein a; Closa_0744; phage(gi17488508) | 5e-78 | Click |
12 | 823969..824262 | PHAGE_Lister_2389: Gp6 protein; Closa_0745; phage(gi17488509) | 5e-06 | Click |
13 | 824237..824584 | hypothetical protein; Closa_0746 | N/A | Click |
14 | 824588..824965 | PHAGE_Lactoc_bIL285: Orf48; Closa_0747; phage(gi13095728) | 3e-19 | Click |
15 | 824962..825294 | PHAGE_Geobac_E2: hypothetical protein GBVE2_gp011; Closa_0748; phage(gi148747738) | 7e-16 | Click |
16 | 825284..825853 | PHAGE_Geobac_GBSV1: major tail protein; Closa_0749; phage(gi115334636) | 9e-43 | Click |
17 | 825857..826231 | PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp27; Closa_0750; phage(gi115334637) | 5e-14 | Click |
18 | 826228..826392 | phage-like protein; Closa_0751 | N/A | Click |
19 | 826404..829040 | PHAGE_Staphy_P954: tail length tape measure protein; Closa_0752; phage(gi257136415) | 8e-91 | Click |
20 | 829040..829750 | PHAGE_Clostr_phi8074_B1: putative phage tail protein; Closa_0753; phage(gi431810373) | 2e-15 | Click |
21 | 829750..831684 | PHAGE_Clostr_phi8074_B1: putative phage tail protein; Closa_0754; phage(gi431810378) | 9e-20 | Click |
22 | 831754..832128 | PHAGE_Strept_SM1: gp56; Closa_0755; phage(gi32469431) | 2e-05 | Click |
23 | 832243..832389 | hypothetical protein; Closa_0756 | N/A | Click |
24 | 832386..832988 | PHAGE_Clostr_st: hypothetical protein CST121; Closa_0757; phage(gi80159807) | 2e-15 | Click |
25 | 833050..833622 | PHAGE_Escher_bV_EcoS_AKFV33: putative tail fiber protein; Closa_0758; phage(gi388570497) | 9e-06 | Click |
26 | 833638..835095 | hypothetical protein; Closa_0759 | N/A | Click |
27 | 835186..835566 | hypothetical protein; Closa_0760 | N/A | Click |
28 | 835566..835670 | hypothetical protein; Closa_0761 | N/A | Click |
29 | 835693..836034 | hypothetical protein; Closa_0762 | N/A | Click |
30 | 836038..836358 | hypothetical protein; Closa_0763 | N/A | Click |
31 | 836438..837277 | PHAGE_Strept_1: lysozyme; Closa_0764; phage(gi9629549) | 5e-13 | Click |
32 | 837522..837749 | hypothetical protein; Closa_0765 | N/A | Click |
33 | 837736..838200 | hypothetical protein; Closa_0766 | N/A | Click |
34 | 838472..838570 | hypothetical protein; Closa_0767 | N/A | Click |
35 | complement(838608..838892) | hypothetical protein; Closa_0768 | N/A | Click |
36 | complement(839242..840573) | PHAGE_Staphy_2: integrase; Closa_0769; phage(gi156603950) | 2e-13 | Click |
37 | 849821..849834 | attR GCAGAAGCAGAGGC | N/A | Click |
Region 4, total : 36 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1489787..1490602 | PHAGE_Lister_A006: gp21; Closa_1387; phage(gi157325436) | 4e-28 | Click |
2 | 1491189..1491374 | hypothetical protein; Closa_1388 | N/A | Click |
3 | 1491445..1492146 | PHAGE_Clostr_phiC2: putative terminase small subunit; Closa_1389; phage(gi134287336) | 8e-55 | Click |
4 | 1492139..1493425 | PHAGE_Bacill_PM1: hypothetical protein; Closa_1390; phage(gi472438300) | 6e-134 | Click |
5 | 1493436..1494842 | PHAGE_Strept_1: portal protein; Closa_1391; phage(gi39653714) | 3e-110 | Click |
6 | 1494842..1496416 | PHAGE_Strept_1: minor head protein; Closa_1392; phage(gi39653715) | 2e-35 | Click |
7 | 1496413..1496688 | hypothetical protein; Closa_1393 | N/A | Click |
8 | 1496972..1497565 | PHAGE_Staphy_CNPH82: putative phage minor capsid protein; Closa_1394; phage(gi119953685) | 3e-13 | Click |
9 | 1497596..1498594 | PHAGE_Strept_1: major head protein; Closa_1395; phage(gi39653721) | 2e-60 | Click |
10 | 1498604..1498957 | hypothetical protein; Closa_1396 | N/A | Click |
11 | 1498950..1499288 | hypothetical protein; Closa_1397 | N/A | Click |
12 | 1499285..1499791 | PHAGE_Strept_1: hypothetical protein EJ-1p50; Closa_1398; phage(gi39653724) | 4e-05 | Click |
13 | 1499781..1500200 | PHAGE_Strept_1: hypothetical protein EJ-1p51; Closa_1399; phage(gi39653725) | 3e-11 | Click |
14 | 1500202..1501242 | PHAGE_Strept_1: sheath tail protein; Closa_1400; phage(gi39653727) | 2e-40 | Click |
15 | 1501254..1501727 | PHAGE_Strept_1: core tail protein; Closa_1401; phage(gi39653728) | 3e-23 | Click |
16 | 1501776..1502186 | PHAGE_Strept_1: hypothetical protein EJ-1p55; Closa_1402; phage(gi39653729) | 6e-15 | Click |
17 | 1502207..1502356 | hypothetical protein; Closa_1403 | N/A | Click |
18 | 1502368..1504332 | PHAGE_Strept_1: tail length tape measure protein; Closa_1404; phage(gi39653730) | 9e-57 | Click |
19 | 1504332..1504994 | PHAGE_Strept_1: hypothetical protein EJ-1p57; Closa_1405; phage(gi39653731) | 6e-13 | Click |
20 | 1505007..1505972 | PHAGE_Strept_1: hypothetical protein EJ-1p58; Closa_1406; phage(gi39653732) | 7e-35 | Click |
21 | 1505987..1506271 | hypothetical protein; Closa_1407 | N/A | Click |
22 | 1506273..1506659 | PHAGE_Strept_1: hypothetical protein EJ-1p60; Closa_1408; phage(gi39653734) | 8e-20 | Click |
23 | 1506656..1507666 | PHAGE_Strept_1: tail protein; Closa_1409; phage(gi39653735) | 3e-39 | Click |
24 | 1507671..1508204 | PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp28; Closa_1410; phage(gi90592664) | 5e-13 | Click |
25 | 1508205..1509440 | PHAGE_Lister_A118: gp19; Closa_1411; phage(gi16798802) | 2e-11 | Click |
26 | 1509453..1509899 | hypothetical protein; Closa_1412 | N/A | Click |
27 | 1509911..1510048 | PHAGE_Bacill_PM1: hypothetical protein; Closa_1413; phage(gi472438327) | 7e-05 | Click |
28 | 1510070..1510498 | PHAGE_Clostr_phiMMP04: holin; Closa_1414; phage(gi414090467) | 4e-29 | Click |
29 | 1510567..1511400 | PHAGE_Strept_PH10: lysA; Closa_1415; phage(gi238821368) | 2e-08 | Click |
30 | complement(1511456..1512007) | PHAGE_Strept_1: lysozyme; Closa_1416; phage(gi9629549) | 7e-13 | Click |
31 | complement(1512070..1512993) | PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p117; Closa_1417; phage(gi9630242) | 7e-23 | Click |
32 | complement(1513057..1513368) | hypothetical protein; Closa_1418 | N/A | Click |
33 | complement(1513380..1513553) | hypothetical protein; Closa_1419 | N/A | Click |
34 | complement(1513697..1514758) | hypothetical protein; Closa_1420 | N/A | Click |
35 | 1514906..1515049 | hypothetical protein; Closa_1421 | N/A | Click |
36 | 1515159..1515938 | PHAGE_Bacill_SPBc2: putative antirepressor; Closa_1422; phage(gi9630225) | 3e-25 | Click |
Region 5, total : 15 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1861498..1861509 | attL ATACCCTAATAA | N/A | Click |
2 | complement(1873164..1873964) | PROPHAGE_Lactoc_Il1403: IS1077F transposase; Closa_1744; phage(gi15674057) | 1e-87 | Click |
3 | complement(1874006..1874569) | PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; Closa_1745; phage(gi17546156) | 6e-20 | Click |
4 | 1874760..1875290 | RNA polymerase, sigma-24 subunit, ECF subfamily; Closa_1746 | N/A | Click |
5 | 1875726..1876763 | Rad3-related DNA helicase-like protein; Closa_1747 | N/A | Click |
6 | 1876760..1877200 | hypothetical protein; Closa_1748 | N/A | Click |
7 | 1877487..1877744 | hypothetical protein; Closa_1750 | N/A | Click |
8 | 1879918..1880184 | prevent-host-death family protein; Closa_1754 | N/A | Click |
9 | 1880174..1880479 | plasmid stabilization system; Closa_1755 | N/A | Click |
10 | 1880555..1881820 | PHAGE_Burkho_phiE125: putative portal protein; Closa_1756; phage(gi17975165) | 2e-72 | Click |
11 | 1881878..1882588 | PHAGE_Geobac_E2: putative Clp peptidase; Closa_1757; phage(gi148747731) | 4e-44 | Click |
12 | 1882602..1883810 | PHAGE_Entero_phiP27: putative major capsid protein; Closa_1758; phage(gi18249904) | 4e-40 | Click |
13 | 1883872..1884147 | uncharacterized phage protein (putative DNA packaging); Closa_1759 | N/A | Click |
14 | 1884147..1884374 | PHAGE_Geobac_E2: putative head-tail adaptor; Closa_1760; phage(gi148747735) | 3e-07 | Click |
15 | 1885224..1885559 | hypothetical protein; Closa_1762 | N/A | Click |
16 | 1885598..1886110 | PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p012; Closa_1763; phage(gi9630137) | 6e-08 | Click |
17 | 1890604..1890615 | attR ATACCCTAATAA | N/A | Click |