| Definition | Clostridium ljungdahlii DSM 13528 chromosome, complete genome. |
|---|---|
| Accession | NC_014328 |
| Length | 4,630,065 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 33 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 351702..352865 | PHAGE_Staphy_2638A: ORF010; CLJU_c03370; phage(gi66395460) | 2e-81 | Click |
| 2 | 352843..353391 | PHAGE_Staphy_phi7401PVL: hypothetical protein; CLJU_c03380; phage(gi448244654) | 2e-44 | Click |
| 3 | 353469..355418 | PHAGE_Staphy_phi7401PVL: phage encoded DNA polymerase I; CLJU_c03390; phage(gi448244655) | 2e-177 | Click |
| 4 | 355534..356307 | PHAGE_Lactob_phiAT3: putative antirepressor protein; CLJU_c03400; phage(gi48697283) | 7e-66 | Click |
| 5 | 356309..356743 | PHAGE_Yersin_phiR1_RT: FIG00694808: hypothetical protein; CLJU_c03410; phage(gi431808968) | 1e-07 | Click |
| 6 | 356740..359103 | PHAGE_Staphy_phi7401PVL: virulence-associated protein E; CLJU_c03420; phage(gi448244658) | 0.0 | Click |
| 7 | 359324..359605 | PHAGE_Acyrth_1: hypothetical protein APSE-1_44; CLJU_c03430; phage(gi9633591) | 1e-14 | Click |
| 8 | 359586..360947 | PHAGE_Staphy_phi7401PVL: helicase; CLJU_c03440; phage(gi448244660) | 1e-120 | Click |
| 9 | 360940..361161 | hypothetical protein; CLJU_c03450 | N/A | Click |
| 10 | 361163..361591 | hypothetical protein; CLJU_c03460 | N/A | Click |
| 11 | 361706..362083 | PHAGE_Bacill_phi105: hypothetical protein phi105_50; CLJU_c03470; phage(gi22855043) | 7e-32 | Click |
| 12 | 362360..363604 | PHAGE_Strept_1: transferase; CLJU_c03480; phage(gi39653711) | 2e-74 | Click |
| 13 | 363673..363984 | hypothetical protein; CLJU_c03490 | N/A | Click |
| 14 | 364224..364940 | hypothetical protein; CLJU_c03500 | N/A | Click |
| 15 | 365099..365365 | hypothetical protein; CLJU_c03510 | N/A | Click |
| 16 | 365413..365883 | PHAGE_Burkho_phi1026b: gp1; CLJU_c03520; phage(gi38707891) | 1e-18 | Click |
| 17 | 365886..367436 | PHAGE_Nocard_NBR1: terminase large subunit; CLJU_c03530; phage(gi372217589) | 2e-88 | Click |
| 18 | 367448..368728 | PHAGE_Entero_phiP27: putative portal protein; CLJU_c03540; phage(gi18249902) | 2e-69 | Click |
| 19 | 368721..369560 | PHAGE_Staphy_SMSAP5: protease; CLJU_c03550; phage(gi422935811) | 2e-49 | Click |
| 20 | 369557..370840 | PHAGE_Mycoba_Brujita: gp7; CLJU_c03560; phage(gi206599551) | 2e-05 | Click |
| 21 | 371006..371488 | hypothetical protein; CLJU_c03570 | N/A | Click |
| 22 | 371472..371621 | hypothetical protein; CLJU_c03580 | N/A | Click |
| 23 | 371608..372060 | hypothetical protein; CLJU_c03590 | N/A | Click |
| 24 | 372128..372700 | PHAGE_Rhizob_3: p008; CLJU_c03600; phage(gi195546539) | 3e-17 | Click |
| 25 | 372697..373023 | PHAGE_Geobac_E2: putative head-tail adaptor; CLJU_c03610; phage(gi148747735) | 2e-16 | Click |
| 26 | 373016..373396 | PHAGE_Clostr_phiCD6356: putative head-tail joining protein; CLJU_c03620; phage(gi326536856) | 9e-26 | Click |
| 27 | 373393..373716 | PHAGE_Clostr_phiCD6356: hypothetical protein; CLJU_c03630; phage(gi326536857) | 5e-20 | Click |
| 28 | 373734..374564 | PHAGE_Bacill_WBeta: putative major tail protein; CLJU_c03640; phage(gi85701389) | 1e-32 | Click |
| 29 | 374611..374895 | PHAGE_Bacill_phIS3501: phage protein; CLJU_c03650; phage(gi422934337) | 2e-08 | Click |
| 30 | 375097..377862 | PHAGE_Geobac_E2: putative tail tape measure protein; CLJU_c03660; phage(gi148747742) | 1e-152 | Click |
| 31 | 377864..378571 | PHAGE_Clostr_phiCD38_2: tail component protein; CLJU_c03670; phage(gi333798124) | 2e-25 | Click |
| 32 | 378650..379477 | hypothetical protein; CLJU_c03680 | N/A | Click |
| 33 | 379586..381439 | PHAGE_Clostr_phiCD38_2: tail protein/endopeptidase; CLJU_c03690; phage(gi333798125) | 2e-23 | Click |
Region 2, total : 53 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(3442433..3444628) | PHAGE_Clostr_phiCTP1: putative tape measure protein; CLJU_c31220; phage(gi304360684) | 3e-137 | Click |
| 2 | complement(3444710..3445321) | hypothetical protein; CLJU_c31230 | N/A | Click |
| 3 | complement(3445578..3446033) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp20; CLJU_c31240; phage(gi304360682) | 1e-20 | Click |
| 4 | 3445990..3446002 | attL ATATTTTTTAATT | N/A | Click |
| 5 | complement(3446046..3446960) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp18; CLJU_c31250; phage(gi304360680) | 6e-43 | Click |
| 6 | complement(3446966..3447397) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp17; CLJU_c31260; phage(gi304360679) | 4e-08 | Click |
| 7 | complement(3447406..3447840) | PHAGE_Strept_Dp_1: hypothetical protein; CLJU_c31270; phage(gi327198361) | 2e-08 | Click |
| 8 | complement(3447846..3448220) | hypothetical protein; CLJU_c31280 | N/A | Click |
| 9 | complement(3448217..3448492) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp14; CLJU_c31290; phage(gi304360676) | 2e-10 | Click |
| 10 | complement(3448507..3448728) | hypothetical protein; CLJU_c31300 | N/A | Click |
| 11 | complement(3448779..3449816) | PHAGE_Clostr_phiCTP1: hypothetical phage capsid protein; CLJU_c31310; phage(gi304360674) | 6e-133 | Click |
| 12 | complement(3449833..3450165) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp11; CLJU_c31320; phage(gi304360673) | 2e-31 | Click |
| 13 | complement(3450178..3450849) | PHAGE_Clostr_phiCTP1: putative scaffold protein; CLJU_c31330; phage(gi304360672) | 3e-29 | Click |
| 14 | complement(3450839..3451123) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp8; CLJU_c31340; phage(gi304360670) | 2e-07 | Click |
| 15 | complement(3451174..3451371) | hypothetical protein; CLJU_c31350 | N/A | Click |
| 16 | complement(3451376..3452734) | PHAGE_Clostr_phiCTP1: putative head morphogenesis protein; CLJU_c31360; phage(gi304360668) | 5e-45 | Click |
| 17 | complement(3452727..3454202) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp4; CLJU_c31370; phage(gi304360666) | 1e-164 | Click |
| 18 | complement(3454202..3455434) | PHAGE_Bacill_PM1: hypothetical protein; CLJU_c31380; phage(gi472438300) | 1e-135 | Click |
| 19 | complement(3455513..3456106) | PHAGE_Deep_s_D6E: HNH endonuclease; CLJU_c31390; phage(gi423262342) | 5e-23 | Click |
| 20 | complement(3456212..3457036) | PHAGE_Staphy_SpaA1: phage terminase, small subunit; CLJU_c31400; phage(gi399498865) | 6e-56 | Click |
| 21 | complement(3457113..3458009) | hypothetical protein; CLJU_c31410 | N/A | Click |
| 22 | 3458112..3458321 | PHAGE_Entero_phiFL3A: hypothetical protein; CLJU_c31420; phage(gi281416224) | 5e-11 | Click |
| 23 | complement(3458323..3458466) | hypothetical protein; CLJU_c31430 | N/A | Click |
| 24 | complement(3458457..3458657) | hypothetical protein; CLJU_c31440 | N/A | Click |
| 25 | 3458759..3458941 | PHAGE_Entero_EF62phi: ycfA-like family protein, putative toxin component; CLJU_c31450; phage(gi384519802) | 8e-07 | Click |
| 26 | 3458993..3459394 | PHAGE_Bacill_phi105: hypothetical protein phi105_48; CLJU_c31460; phage(gi22855041) | 2e-38 | Click |
| 27 | complement(3459575..3460369) | hypothetical protein; CLJU_c31470 | N/A | Click |
| 28 | complement(3460399..3461577) | phage-like protein; CLJU_c31480 | N/A | Click |
| 29 | complement(3461796..3461996) | PHAGE_Escher_D108: Com; CLJU_c31490; phage(gi281199699) | 5e-05 | Click |
| 30 | complement(3462611..3463276) | hypothetical protein; CLJU_c31500 | N/A | Click |
| 31 | complement(3463302..3464507) | PHAGE_Clostr_phiCD27: putative phage DNA-binding protein; CLJU_c31510; phage(gi209901309) | 3e-77 | Click |
| 32 | complement(3464534..3465307) | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp71; CLJU_c31520; phage(gi209901308) | 2e-11 | Click |
| 33 | complement(3465403..3465939) | hypothetical protein; CLJU_c31530 | N/A | Click |
| 34 | complement(3466187..3466330) | hypothetical protein; CLJU_c31540 | N/A | Click |
| 35 | 3466600..3466815 | PHAGE_Entero_phiFL4A: Cro repressor protein; CLJU_c31550; phage(gi281416439) | 3e-07 | Click |
| 36 | 3466818..3467159 | hypothetical protein; CLJU_c31560 | N/A | Click |
| 37 | complement(3467612..3468304) | PHAGE_Clostr_st: metallo beta-lactamase family protein; CLJU_c31570; phage(gi80159792) | 2e-05 | Click |
| 38 | complement(3468554..3469195) | hypothetical protein; CLJU_c31580 | N/A | Click |
| 39 | complement(3469188..3469604) | PHAGE_Staphy_69: ORF032; CLJU_c31590; phage(gi66395322) | 2e-22 | Click |
| 40 | complement(3469751..3470161) | hypothetical protein; CLJU_c31600 | N/A | Click |
| 41 | complement(3470205..3471161) | PHAGE_Lister_A500: gp45; CLJU_c31610; phage(gi157325004) | 3e-54 | Click |
| 42 | complement(3471174..3471902) | PHAGE_Lister_B054: gp51; CLJU_c31620; phage(gi157325335) | 5e-63 | Click |
| 43 | complement(3471902..3472855) | PHAGE_Lactob_LF1: RecT protein; CLJU_c31630; phage(gi418489428) | 4e-53 | Click |
| 44 | complement(3472882..3474867) | PHAGE_Lister_B054: gp49; CLJU_c31640; phage(gi157325333) | 3e-111 | Click |
| 45 | complement(3474922..3475155) | hypothetical protein; CLJU_c31650 | N/A | Click |
| 46 | complement(3475171..3475353) | hypothetical protein; CLJU_c31660 | N/A | Click |
| 47 | complement(3475369..3475581) | hypothetical protein; CLJU_c31670 | N/A | Click |
| 48 | complement(3475574..3475972) | hypothetical protein; CLJU_c31680 | N/A | Click |
| 49 | complement(3476022..3476303) | hypothetical protein; CLJU_c31690 | N/A | Click |
| 50 | complement(3476281..3476799) | hypothetical protein; CLJU_c31700 | N/A | Click |
| 51 | complement(3476859..3477089) | PHAGE_Strept_PH15: cro-like protein; CLJU_c31710; phage(gi190151423) | 1e-05 | Click |
| 52 | 3477248..3477634 | PHAGE_Lister_B054: gp41; CLJU_c31720; phage(gi157325325) | 2e-14 | Click |
| 53 | 3477660..3478118 | PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp43; CLJU_c31730; phage(gi209901280) | 4e-30 | Click |
| 54 | 3478194..3478206 | attR ATATTTTTTAATT | N/A | Click |
| 55 | 3478244..3479425 | PHAGE_Clostr_phiC2: putative integrase; CLJU_c31740; phage(gi134287379) | 3e-34 | Click |
Region 3, total : 25 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3961663..3961674 | attL ATCTTTATTATT | N/A | Click |
| 2 | complement(3968255..3968923) | PHAGE_Xantho_vB_XveM_DIBBI: head morphogenesis protein; CLJU_c36440; phage(gi389060406) | 8e-07 | Click |
| 3 | complement(3969024..3970523) | PHAGE_Bacill_36: low copy number virion structural protein; CLJU_c36450; phage(gi156564190) | 1e-12 | Click |
| 4 | complement(3970844..3972805) | PHAGE_Bacill_phiAGATE: putative tail lysin 2; CLJU_c36460; phage(gi448260828) | 7e-12 | Click |
| 5 | complement(3972998..3973618) | hypothetical protein; CLJU_c36470 | N/A | Click |
| 6 | complement(3973788..3974192) | phage-like protein; CLJU_c36480 | N/A | Click |
| 7 | complement(3974325..3974840) | PHAGE_Clostr_PhiS63: gp40; CLJU_c36490; phage(gi388570666) | 6e-39 | Click |
| 8 | complement(3974844..3976175) | PHAGE_Entero_phiFL4A: DNA helicase; CLJU_c36500; phage(gi281416462) | 2e-145 | Click |
| 9 | complement(3976260..3976670) | PHAGE_Pseudo_phiKZ: ORF296; CLJU_c36510; phage(gi29135232) | 3e-08 | Click |
| 10 | complement(3976671..3976946) | PHAGE_Bacter_2: hypothetical protein APSE235; CLJU_c36520; phage(gi212499740) | 1e-16 | Click |
| 11 | complement(3977221..3979644) | PHAGE_Entero_phiFL4A: VirE domain protein; CLJU_c36530; phage(gi281416460) | 0.0 | Click |
| 12 | complement(3980049..3981395) | PHAGE_Bacill_phBC6A51: hypothetical protein BC1912; CLJU_c36540; phage(gi31415804) | 2e-42 | Click |
| 13 | complement(3981611..3983563) | PHAGE_Entero_phiFL4A: DNA polymerase; CLJU_c36550; phage(gi281416455) | 4e-170 | Click |
| 14 | complement(3983563..3984123) | PHAGE_Staphy_SMSAP5: hypothetical protein; CLJU_c36560; phage(gi422935814) | 1e-57 | Click |
| 15 | complement(3984156..3985307) | PHAGE_Entero_phiFL4A: hypothetical protein; CLJU_c36570; phage(gi281416449) | 7e-93 | Click |
| 16 | complement(3985307..3985726) | PHAGE_Entero_EFRM31: major capsid protein; CLJU_c36580; phage(gi327198115) | 6e-05 | Click |
| 17 | complement(3985755..3986030) | hypothetical protein; CLJU_c36590 | N/A | Click |
| 18 | complement(3986030..3986284) | hypothetical protein; CLJU_c36600 | N/A | Click |
| 19 | complement(3986271..3986744) | hypothetical protein; CLJU_c36610 | N/A | Click |
| 20 | complement(3986957..3987520) | PHAGE_Clostr_phi3626: putative sigma factor; CLJU_c36620; phage(gi20065995) | 9e-18 | Click |
| 21 | complement(3987699..3987860) | hypothetical protein; CLJU_c36630 | N/A | Click |
| 22 | complement(3987867..3988121) | hypothetical protein; CLJU_c36640 | N/A | Click |
| 23 | complement(3988134..3988949) | PHAGE_Staphy_phiMR11: putative anti-repressor protein; CLJU_c36650; phage(gi162290113) | 1e-47 | Click |
| 24 | complement(3988973..3989173) | putative transcriptional regulator; CLJU_c36660 | N/A | Click |
| 25 | 3989375..3990319 | PHAGE_Staphy_29: ORF022; CLJU_c36670; phage(gi66396213) | 2e-26 | Click |
| 26 | 3990094..3990105 | attR ATCTTTATTATT | N/A | Click |
| 27 | 3990357..3991532 | PROPHAGE_Mesorh_MAFF303099: bacteriophage integrase; CLJU_c36680; phage(gi13470699) | 2e-39 | Click |