Definition | Hyphomicrobium denitrificans ATCC 51888 chromosome, complete genome. |
---|---|
Accession | NC_014313 |
Length | 3,638,969 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 157496..158368 | PHAGE_Burkho_Bcep22: Bcep22gp75; Hden_0159; phage(gi38640380) | 8e-05 | Click |
2 | 158425..159537 | PHAGE_Erwini_PEp14: hypothetical protein; Hden_0160; phage(gi374531858) | 1e-05 | Click |
3 | 159552..160007 | hypothetical protein; Hden_0161 | N/A | Click |
4 | 160058..160273 | hypothetical protein; Hden_0162 | N/A | Click |
5 | 160254..160625 | hypothetical protein; Hden_0163 | N/A | Click |
6 | 160625..162046 | PHAGE_Xylell_Xfas53: head completion protein; Hden_0164; phage(gi273810455) | 4e-22 | Click |
7 | 162043..162495 | outer membrane autotransporter; Hden_0165 | N/A | Click |
8 | 162492..163184 | PHAGE_Equid__4: envelope glycoprotein J; Hden_0166; phage(gi9629801) | 8e-05 | Click |
9 | 163216..163821 | hypothetical protein; Hden_0167 | N/A | Click |
10 | 163821..164309 | PHAGE_Xantho_phiL7: P07; Hden_0168; phage(gi238695594) | 3e-24 | Click |
11 | 164309..165490 | PHAGE_Entero_IME10: gp20; Hden_0169; phage(gi422934289) | 9e-09 | Click |
12 | 165490..167589 | PHAGE_Sulfit_pCB2047_C: hypothetical protein; Hden_0170; phage(gi472341754) | 1e-13 | Click |
13 | 167812..169161 | PHAGE_Aeromo_CC2: short tail fibers; Hden_0172; phage(gi423261697) | 2e-05 | Click |
14 | 169158..169601 | hypothetical protein; Hden_0173 | N/A | Click |
15 | 169588..169935 | hypothetical protein; Hden_0174 | N/A | Click |
16 | 169932..170729 | PHAGE_Serrat_phiMAM1: baseplate hub subunit and tail lysozyme; Hden_0175; phage(gi440789403) | 7e-13 | Click |
Region 2, total : 21 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1155302..1157329 | PHAGE_Xantho_OP1: putative head portal protein; Hden_1106; phage(gi84662598) | 3e-22 | Click |
2 | 1157351..1157740 | hypothetical protein; Hden_1107 | N/A | Click |
3 | 1157992..1158312 | hypothetical protein; Hden_1108 | N/A | Click |
4 | 1158560..1158979 | hypothetical protein; Hden_1109 | N/A | Click |
5 | 1159144..1159848 | PHAGE_Azospi_Cd: phage head maturation protease; Hden_1110; phage(gi168495135) | 2e-33 | Click |
6 | 1160022..1161263 | PHAGE_Salmon_ST64B: Major capsid protein precursor; Hden_1111; phage(gi23505451) | 3e-77 | Click |
7 | 1161520..1162095 | PHAGE_Rhodob_RcapNL: hypothetical protein; Hden_1112; phage(gi461474967) | 2e-18 | Click |
8 | 1162092..1162424 | PHAGE_Geobac_E2: putative head-tail adaptor; Hden_1113; phage(gi148747735) | 1e-07 | Click |
9 | 1162421..1162591 | ExbD/TolR-like translocation protein; Hden_1114 | N/A | Click |
10 | 1162591..1163004 | PHAGE_Rhizob_3: p012; Hden_1115; phage(gi195546543) | 9e-14 | Click |
11 | 1163163..1163576 | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; Hden_1116; phage(gi461474972) | 5e-21 | Click |
12 | 1163738..1164118 | hypothetical protein; Hden_1117 | N/A | Click |
13 | 1164118..1164291 | hypothetical protein; Hden_1118 | N/A | Click |
14 | 1164296..1164889 | PHAGE_Shigel_EP23: phage tail length tape-measure protein 1; Hden_1119; phage(gi371496286) | 2e-14 | Click |
15 | 1164902..1165540 | PHAGE_Roseob_1: putative glycoside hydrolase; Hden_1120; phage(gi331028135) | 4e-44 | Click |
16 | 1165537..1166397 | PHAGE_Roseob_1: gene transfer agent; Hden_1121; phage(gi331028136) | 6e-75 | Click |
17 | 1166401..1166850 | PHAGE_Roseob_1: phage cell wall peptidase; Hden_1122; phage(gi331028137) | 2e-32 | Click |
18 | 1166854..1170801 | PHAGE_Roseob_1: gene transfer agent; Hden_1123; phage(gi331028138) | 0.0 | Click |
19 | 1171172..1172485 | PHAGE_Serrat_phiMAM1: baseplate hub subunit and tail lysozyme; Hden_1124; phage(gi440789403) | 3e-26 | Click |
20 | 1172580..1172870 | hypothetical protein; Hden_1125 | N/A | Click |
21 | 1172952..1173623 | PHAGE_Feldma_virus: putative sensor histidine kinase; Hden_1126; phage(gi197322366) | 1e-04 | Click |
Region 3, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1251145..1251354 | phage-like protein; Hden_1226 | N/A | Click |
2 | 1251389..1252924 | PHAGE_Escher_D108: tail sheath protein; Hden_1227; phage(gi281199683) | 5e-53 | Click |
3 | 1252975..1253340 | hypothetical protein; Hden_1228 | N/A | Click |
4 | 1253379..1253783 | hypothetical protein; Hden_1229 | N/A | Click |
5 | 1253948..1255957 | PHAGE_Geobac_E2: putative tail tape measure protein; Hden_1230; phage(gi148747742) | 7e-09 | Click |
6 | 1255957..1257216 | PHAGE_Escher_D108: DNA circularization protein; Hden_1231; phage(gi281199688) | 1e-09 | Click |
7 | 1257225..1258271 | PHAGE_Escher_D108: baseplate assembly protein; Hden_1232; phage(gi281199689) | 8e-29 | Click |
8 | 1258271..1258630 | PHAGE_Haemop_SuMu: phage-related baseplate assembly protein gp45; Hden_1233; phage(gi418489069) | 2e-05 | Click |
9 | 1258637..1258894 | PHAGE_Ralsto_phiRSA1: putative bacteriophage gp29 protein; Hden_1234; phage(gi145708075) | 3e-07 | Click |
10 | 1258894..1259487 | PHAGE_Escher_D108: hypothetical protein; Hden_1235; phage(gi281199691) | 1e-12 | Click |
11 | 1259500..1260582 | PHAGE_Escher_D108: hypothetical protein; Hden_1236; phage(gi281199692) | 2e-39 | Click |
12 | 1260579..1261310 | hypothetical protein; Hden_1237 | N/A | Click |
13 | 1261303..1262220 | PHAGE_Synech_S_RIP1: hypothetical protein; Hden_1238; phage(gi472342939) | 7e-08 | Click |
14 | 1262225..1263535 | PHAGE_Cyanop_PSS2: fiber protein; Hden_1239; phage(gi254729534) | 4e-20 | Click |
15 | 1263526..1264356 | PHAGE_Mycoba_Solon: gp5; Hden_1240; phage(gi203463364) | 3e-08 | Click |
16 | 1264399..1265277 | PHAGE_Agroba_7_7_1: hypothetical protein; Hden_1241; phage(gi435844350) | 6e-35 | Click |
Region 4, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1607211..1608083 | PHAGE_Burkho_Bcep22: Bcep22gp75; Hden_1578; phage(gi38640380) | 8e-05 | Click |
2 | 1608140..1609252 | PHAGE_Erwini_PEp14: hypothetical protein; Hden_1579; phage(gi374531858) | 1e-05 | Click |
3 | 1609267..1609722 | hypothetical protein; Hden_1580 | N/A | Click |
4 | 1609773..1609988 | hypothetical protein; Hden_1581 | N/A | Click |
5 | 1609969..1610340 | hypothetical protein; Hden_1582 | N/A | Click |
6 | 1610340..1611761 | PHAGE_Xylell_Xfas53: head completion protein; Hden_1583; phage(gi273810455) | 4e-22 | Click |
7 | 1611758..1612210 | outer membrane autotransporter; Hden_1584 | N/A | Click |
8 | 1612207..1612899 | PHAGE_Equid__4: envelope glycoprotein J; Hden_1585; phage(gi9629801) | 8e-05 | Click |
9 | 1612931..1613536 | hypothetical protein; Hden_1586 | N/A | Click |
10 | 1613536..1614024 | PHAGE_Xantho_phiL7: P07; Hden_1587; phage(gi238695594) | 3e-24 | Click |
11 | 1614024..1615205 | PHAGE_Entero_IME10: gp20; Hden_1588; phage(gi422934289) | 9e-09 | Click |
12 | 1615205..1617304 | PHAGE_Sulfit_pCB2047_C: hypothetical protein; Hden_1589; phage(gi472341754) | 1e-13 | Click |
13 | 1617527..1618816 | PHAGE_Aeromo_CC2: short tail fibers; Hden_1591; phage(gi423261697) | 2e-05 | Click |
14 | 1618874..1619317 | hypothetical protein; Hden_1592 | N/A | Click |
15 | 1619304..1619651 | hypothetical protein; Hden_1593 | N/A | Click |
16 | 1619648..1620445 | PHAGE_Serrat_phiMAM1: baseplate hub subunit and tail lysozyme; Hden_1594; phage(gi440789403) | 7e-13 | Click |
Region 5, total : 23 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(3061408..3064029) | PHAGE_Rhodob_RcapMu: putative tail fiber protein; Hden_2962; phage(gi356870893) | 9e-12 | Click |
2 | 3064041..3064430 | hypothetical protein; Hden_2963 | N/A | Click |
3 | complement(3064436..3064915) | hypothetical protein; Hden_2964 | N/A | Click |
4 | complement(3064915..3065265) | hypothetical protein; Hden_2965 | N/A | Click |
5 | complement(3065271..3067382) | PHAGE_Xantho_CP1: putative tail length tape measure protein; Hden_2966; phage(gi431811013) | 5e-15 | Click |
6 | complement(3067375..3067608) | hypothetical protein; Hden_2967 | N/A | Click |
7 | complement(3067605..3067985) | hypothetical protein; Hden_2968 | N/A | Click |
8 | complement(3068004..3068474) | hypothetical protein; Hden_2969 | N/A | Click |
9 | complement(3068487..3068882) | PHAGE_Marino_P12026: hypothetical protein; Hden_2970; phage(gi399528327) | 7e-10 | Click |
10 | complement(3068969..3069484) | phage protein, HK97 gp10 family; Hden_2971 | N/A | Click |
11 | complement(3069481..3069816) | phage head-tail adaptor; Hden_2972 | N/A | Click |
12 | complement(3069816..3070391) | PHAGE_Rhizob_3: p008; Hden_2973; phage(gi195546539) | 7e-14 | Click |
13 | complement(3070395..3070772) | hypothetical protein; Hden_2974 | N/A | Click |
14 | complement(3070804..3071217) | PHAGE_Rhizob_3: p009; Hden_2975; phage(gi195546540) | 9e-25 | Click |
15 | complement(3071259..3071735) | hypothetical protein; Hden_2976 | N/A | Click |
16 | complement(3071853..3072305) | PHAGE_Azospi_Cd: hypothetical protein APCd_gp34; Hden_2977; phage(gi168495137) | 6e-34 | Click |
17 | complement(3072409..3073911) | PHAGE_Salmon_ST64B: Major capsid protein precursor; Hden_2978; phage(gi23505451) | 7e-46 | Click |
18 | complement(3073958..3074572) | PHAGE_Salmon_ST64B: Pro-head protease; Hden_2979; phage(gi23505450) | 7e-18 | Click |
19 | complement(3074608..3075441) | hypothetical protein; Hden_2980 | N/A | Click |
20 | complement(3075464..3075742) | hypothetical protein; Hden_2981 | N/A | Click |
21 | complement(3075724..3075996) | hypothetical protein; Hden_2982 | N/A | Click |
22 | complement(3075993..3077339) | PHAGE_Salmon_ST64B: Portal Protein; Hden_2983; phage(gi23505449) | 2e-30 | Click |
23 | complement(3077362..3079074) | PHAGE_Salmon_ST64B: Terminase large subunit; Hden_2984; phage(gi23505447) | 4e-54 | Click |