Definition Ralstonia solanacearum CFBP2957 chromosome, complete genome.
Accession NC_014307
Length 3,417,386
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 62 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1739290..1743408  PHAGE_Human__8: ORF75; RCFBP_11680; phage(gi139472887)  7e-31  Click
2 1744272..1744463  hypothetical protein; RCFBP_11681  N/A  Click
3 1744526..1745155  hypothetical protein; RCFBP_11682  N/A  Click
4 1745207..1745797  hypothetical protein; RCFBP_11683  N/A  Click
5 1745893..1747368  PHAGE_Campyl_CP21: radical SAM domain-containing protein; RCFBP_11685; phage(gi422935302)  9e-06  Click
6 complement(1747423..1748343)  PHAGE_Burkho_phi1026b: gp58; RCFBP_11686; phage(gi38707948)  4e-11  Click
7 complement(1748625..1748978)  PHAGE_Burkho_BcepMu: gp01; RCFBP_11687; phage(gi48696911)  1e-42  Click
8 complement(1748975..1749394)  PHAGE_Burkho_BcepMu: gp02; RCFBP_11688; phage(gi48696912)  1e-57  Click
9 complement(1749560..1749832)  PHAGE_Burkho_BcepMu: gp04; RCFBP_11689; phage(gi48696914)  9e-24  Click
10 complement(1749829..1750047)  hypothetical protein; RCFBP_11690  N/A  Click
11 complement(1750049..1750600)  PHAGE_Burkho_BcepMu: gp05; RCFBP_11691; phage(gi48696915)  2e-60  Click
12 complement(1750664..1751131)  hypothetical protein; RCFBP_11692  N/A  Click
13 complement(1751124..1751606)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp20; RCFBP_11693; phage(gi198449282)  4e-15  Click
14 complement(1751606..1751950)  PHAGE_Burkho_BcepMu: gp07; RCFBP_11694; phage(gi48696917)  5e-08  Click
15 complement(1751952..1753241)  PHAGE_Burkho_BcepMu: gp08; RCFBP_11695; phage(gi48696918)  1e-177  Click
16 complement(1753238..1755037)  PHAGE_Burkho_BcepMu: gp09; RCFBP_11696; phage(gi48696919)  0.0  Click
17 complement(1755041..1755982)  PHAGE_Burkho_BcepMu: gp10; RCFBP_11697; phage(gi48696920)  2e-119  Click
18 complement(1755992..1756303)  PHAGE_Burkho_BcepMu: gp12; RCFBP_11698; phage(gi48696922)  4e-35  Click
19 complement(1756293..1756496)  PHAGE_Pseudo_F10: hypothetical protein PPF10_gp037; RCFBP_11699; phage(gi148912802)  4e-08  Click
20 complement(1756499..1756936)  PHAGE_Burkho_BcepMu: gp13; RCFBP_11700; phage(gi48696923)  2e-60  Click
21 1757125..1757355  hypothetical protein; RCFBP_11701  N/A  Click
22 complement(1757408..1757650)  PHAGE_Burkho_BcepMu: gp16; RCFBP_11702; phage(gi48696926)  1e-35  Click
23 1757770..1758192  PHAGE_Burkho_BcepMu: gp17; RCFBP_11703; phage(gi48696927)  9e-07  Click
24 1758202..1758891  PHAGE_Burkho_BcepMu: gp18; RCFBP_11704; phage(gi48696928)  9e-46  Click
25 1758982..1759494  hypothetical protein; RCFBP_11705  N/A  Click
26 1759562..1759909  PHAGE_Burkho_BcepMu: gp21; RCFBP_11706; phage(gi48696931)  3e-48  Click
27 1759935..1760519  PHAGE_Burkho_BcepMu: gp22; RCFBP_11707; phage(gi48696932)  4e-70  Click
28 1760516..1760926  PHAGE_Pseudo_JBD88a: hypothetical protein; RCFBP_11708; phage(gi448244710)  2e-15  Click
29 1760937..1761026  hypothetical protein; RCFBP_11709  N/A  Click
30 1761058..1761402  PHAGE_Burkho_BcepMu: gp25; RCFBP_11710; phage(gi48696935)  3e-37  Click
31 1761395..1761706  PHAGE_Burkho_BcepMu: gp26; RCFBP_11711; phage(gi48696936)  6e-36  Click
32 1761703..1762251  PHAGE_Burkho_BcepMu: gp27; RCFBP_11712; phage(gi48696937)  7e-71  Click
33 1762248..1763768  PHAGE_Burkho_BcepMu: gp28; RCFBP_11713; phage(gi48696938)  0.0  Click
34 1763765..1765237  PHAGE_Burkho_BcepMu: gp29; RCFBP_11714; phage(gi48696939)  0.0  Click
35 1765230..1766072  PHAGE_Burkho_BcepMu: gp30; RCFBP_11715; phage(gi48696940)  7e-123  Click
36 1766069..1766593  PHAGE_Burkho_BcepMu: gp31; RCFBP_11716; phage(gi48696941)  2e-46  Click
37 1766785..1767903  PHAGE_Burkho_BcepMu: gp32; RCFBP_11717; phage(gi48696942)  6e-142  Click
38 1767923..1768849  PHAGE_Burkho_BcepMu: gp34; RCFBP_11718; phage(gi48696944)  2e-117  Click
39 1768846..1769040  hypothetical protein; RCFBP_11719  N/A  Click
40 1769037..1769369  PHAGE_Burkho_BcepMu: gp35; RCFBP_11720; phage(gi48696945)  1e-33  Click
41 1769372..1769668  PHAGE_Aeromo_25: hypothetical protein PHG25p104nc; RCFBP_11721; phage(gi109290089)  2e-17  Click
42 1769646..1770113  PHAGE_Burkho_BcepMu: gp36; RCFBP_11722; phage(gi48696946)  6e-54  Click
43 1770113..1770577  PHAGE_Burkho_BcepMu: gp37; RCFBP_11723; phage(gi48696947)  5e-55  Click
44 1770574..1770798  PHAGE_Burkho_BcepMu: gp38; RCFBP_11724; phage(gi48696948)  2e-18  Click
45 1770800..1772230  PHAGE_Burkho_BcepMu: gp39; RCFBP_11725; phage(gi48696949)  0.0  Click
46 1772233..1772757  PHAGE_Burkho_BcepMu: gp40; RCFBP_11726; phage(gi48696950)  3e-80  Click
47 1772983..1773618  hypothetical protein; RCFBP_11727  N/A  Click
48 1773866..1774171  hypothetical protein; RCFBP_11728  N/A  Click
49 complement(1774231..1774470)  PHAGE_Burkho_phiE255: gp17, putative membrane protein; RCFBP_11729; phage(gi134288803)  5e-17  Click
50 1774499..1777003  PHAGE_Burkho_BcepMu: gp44; RCFBP_11730; phage(gi48696954)  0.0  Click
51 1777003..1777911  PHAGE_Burkho_BcepMu: gp45; RCFBP_11731; phage(gi48696955)  3e-108  Click
52 1777911..1778117  PHAGE_Burkho_BcepMu: gp46; RCFBP_11732; phage(gi48696956)  9e-24  Click
53 1778114..1779301  PHAGE_Burkho_BcepMu: gp47; RCFBP_11733; phage(gi48696957)  9e-142  Click
54 1779298..1779900  PHAGE_Burkho_BcepMu: gp48; RCFBP_11734; phage(gi48696958)  3e-80  Click
55 1779950..1780156  hypothetical protein; RCFBP_11735  N/A  Click
56 1780260..1780613  PHAGE_Burkho_BcepMu: gp49; RCFBP_11736; phage(gi48696959)  7e-45  Click
57 1780610..1781716  PHAGE_Burkho_BcepMu: gp50; RCFBP_11737; phage(gi48696960)  1e-136  Click
58 1781802..1782347  PHAGE_Burkho_BcepMu: gp51; RCFBP_11738; phage(gi48696961)  1e-18  Click
59 1782361..1783938  PHAGE_Ralsto_phiRSA1: tail fiber protein gpH; RCFBP_11739; phage(gi145708097)  1e-164  Click
60 1783948..1784694  PHAGE_Ralsto_phiRSA1: tail fiber assembly-like protein; RCFBP_11740; phage(gi145708099)  9e-106  Click
61 1784697..1785149  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp26; RCFBP_11741; phage(gi145708100)  2e-65  Click
62 1785338..1786156  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; RCFBP_11742; phage(gi116326757)  7e-14  Click
Region 2, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1861119..1861550)  PHAGE_Ralsto_RSS0: hypothetical protein; RCFBP_11814; phage(gi423262464)  4e-75  Click
2 complement(1861591..1862205)  PHAGE_Ralsto_RSS0: hypothetical protein; RCFBP_11815; phage(gi423262463)  1e-33  Click
3 complement(1862289..1863440)  PHAGE_Ralsto_PE226: putative phage assembly protein; RCFBP_11816; phage(gi327198635)  5e-168  Click
4 complement(1863448..1863765)  PHAGE_Ralsto_PE226: putative minor coat protein; RCFBP_11817; phage(gi327198634)  9e-37  Click
5 complement(1863765..1865162)  PHAGE_Ralsto_PE226: putative minor coat protein; RCFBP_11818; phage(gi327198633)  2e-177  Click
6 complement(1865303..1865527)  PHAGE_Ralsto_PE226: putative major coat protein; RCFBP_11820; phage(gi327198632)  1e-08  Click
7 complement(1865524..1865763)  PHAGE_Ralsto_PE226: putative minor coat protein; RCFBP_11821; phage(gi327198631)  2e-24  Click
8 complement(1865765..1866076)  PHAGE_Ralsto_PE226: hypothetical protein; RCFBP_11822; phage(gi327198629)  5e-43  Click
9 complement(1866080..1867012)  PHAGE_Ralsto_PE226: putative phage DNA replicase; RCFBP_11823; phage(gi327198637)  1e-142  Click
10 complement(1867207..1867401)  hypothetical protein; RCFBP_11824  N/A  Click
11 1867541..1868017  PHAGE_Ralsto_RSS0: hypothetical protein; RCFBP_11825; phage(gi423262465)  5e-47  Click
Region 3, total : 36 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2308294..2308316  attL    TTCGATCCCGGCCTCGGGCACCA  N/A  Click
2 2308470..2309498  PHAGE_Mannhe_phiMHaA1: integrase; RCFBP_20321; phage(gi109289985)  1e-41  Click
3 2309618..2309995  PHAGE_Acinet_133: gp27 baseplate hub subunit; RCFBP_20322; phage(gi326536333)  2e-08  Click
4 2310003..2310458  hypothetical protein; RCFBP_20323  N/A  Click
5 2310549..2310728  hypothetical protein; RCFBP_20324  N/A  Click
6 2310871..2311806  hypothetical protein; RCFBP_20325  N/A  Click
7 complement(2311868..2312410)  PHAGE_Burkho_BcepIL02: Rz-like phage lysis protein; RCFBP_20327; phage(gi238801691)  6e-11  Click
8 complement(2312410..2312685)  transmembrane protein; RCFBP_20328  N/A  Click
9 complement(2312688..2312981)  lipoprotein; RCFBP_20329  N/A  Click
10 complement(2312996..2313487)  PHAGE_Pseudo_vB_PaeS_PMG1: lysozyme; RCFBP_20330; phage(gi374531676)  1e-48  Click
11 complement(2313556..2314194)  PHAGE_Xantho_phiL7: P23; RCFBP_20331; phage(gi238695610)  2e-10  Click
12 complement(2314241..2314552)  PHAGE_Burkho_Bcep176: gp61; RCFBP_20332; phage(gi77864686)  2e-05  Click
13 complement(2314552..2317707)  PHAGE_Burkho_KS9: tail tip fiber protein gp19; RCFBP_20333; phage(gi255033750)  0.0  Click
14 2317756..2318010  hypothetical protein; RCFBP_20334  N/A  Click
15 2318007..2318345  PHAGE_Entero_mEp234: HicB protein; RCFBP_20335; phage(gi428782291)  9e-05  Click
16 complement(2318510..2319091)  PHAGE_Burkho_KS9: tail component protein gp18; RCFBP_20336; phage(gi255033749)  6e-52  Click
17 complement(2319116..2319826)  PHAGE_Burkho_KS9: tail component protein gp17; peptidase;; phage RCFBP_20337(gi255033748)  1e-67  Click
18 complement(2319828..2320529)  PHAGE_Burkho_KS9: minor tail protein gp16; RCFBP_20338; phage(gi255033747)  2e-73  Click
19 complement(2320526..2321122)  PHAGE_Gifsy_1: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; RCFBP_20339; phage(gi169257212)  9e-19  Click
20 complement(2321128..2321805)  PHAGE_Ralsto_phiRSA1: phage tail collar protein; e14; phage prophage (stfe); RCFBP_20340(gi145708098)  2e-31  Click
21 complement(2321802..2322140)  PHAGE_Entero_mEpX2: minor tail protein; RCFBP_20341; phage(gi428765629)  1e-25  Click
22 complement(2322152..2325001)  PHAGE_Pseudo_MP29: putative tail component protein; RCFBP_20342; phage(gi215480016)  5e-97  Click
23 complement(2325003..2325188)  PHAGE_Cronob_phiES15: hypothetical protein; RCFBP_20343; phage(gi401817604)  4e-05  Click
24 complement(2325311..2325631)  PHAGE_Escher_HK639: hypothetical protein; RCFBP_20344; phage(gi356870614)  1e-14  Click
25 complement(2325637..2326293)  PHAGE_Escher_HK639: major tail protein; RCFBP_20345; phage(gi356870612)  6e-30  Click
26 complement(2326357..2326710)  PHAGE_Xantho_CP1: hypothetical protein; RCFBP_20346; phage(gi431811008)  1e-12  Click
27 complement(2326700..2327200)  PHAGE_Xantho_CP1: hypothetical protein; RCFBP_20347; phage(gi431811007)  1e-13  Click
28 complement(2327203..2327529)  PHAGE_Burkho_KS9: head-tail adaptor gp7; RCFBP_20348; phage(gi255033739)  6e-13  Click
29 complement(2327530..2328084)  PHAGE_Burkho_KS9: hypothetical protein gp6; RCFBP_20349; phage(gi255033738)  1e-21  Click
30 complement(2328088..2328477)  hypothetical protein; RCFBP_20350  N/A  Click
31 complement(2328504..2329760)  PHAGE_Burkho_KS9: major capsid protein gp5; RCFBP_20351; phage(gi255033737)  3e-141  Click
32 complement(2329825..2330592)  PHAGE_Burkho_KS9: protease/scaffold protein gp4; RCFBP_20352; phage(gi255033736)  3e-79  Click
33 complement(2330558..2331865)  PHAGE_Burkho_KS9: portal protein gp3; RCFBP_20353; phage(gi255033735)  1e-114  Click
34 complement(2331862..2333520)  PHAGE_Burkho_KS9: terminase gp2; RCFBP_20354; phage(gi255033734)  0.0  Click
35 complement(2333571..2334104)  PHAGE_Burkho_KS9: hypothetical protein gp1; RCFBP_20355; phage(gi255033733)  2e-48  Click
36 2333974..2334156  hypothetical protein; RCFBP_20356  N/A  Click
37 complement(2334328..2334765)  PHAGE_Burkho_KS9: homing endonuclease gp49; RCFBP_20357; phage(gi255033732)  1e-26  Click
38 2348275..2348297  attR    TTCGATCCCGGCCTCGGGCACCA  N/A  Click