Definition Erwinia billingiae Eb661 chromosome, complete genome.
Accession NC_014306
Length 5,100,167
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 42 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(103545..104921)  PHAGE_Ectoca_1: EsV-1-65; EbC_00900; phage(gi13242537)  2e-08  Click
2 complement(104918..105616)  PHAGE_Feldma_virus: putative sensor histidine kinase; EbC_00910; phage(gi197322366)  7e-09  Click
3 105767..106276  periplasmic repressor of cpx regulon by interaction with CpxA; EbC_00920  N/A  Click
4 106307..106321  attL    CACCATCCCTGTCTT  N/A  Click
5 complement(106494..107501)  PHAGE_Entero_P2: Int; EbC_00930; phage(gi9630357)  3e-85  Click
6 108343..108621  PHAGE_Entero_P2: Cox; EbC_00940; phage(gi9630359)  4e-19  Click
7 108630..108893  phage-like protein; EbC_00950  N/A  Click
8 109371..109817  hypothetical protein; EbC_00960  N/A  Click
9 109891..110121  PHAGE_Erwini_ENT90: putative prophage protein; EbC_00970; phage(gi431810987)  9e-11  Click
10 110121..110348  PHAGE_Entero_P2: Orf82; EbC_00980; phage(gi9630364)  5e-11  Click
11 110666..111157  PHAGE_Salmon_RE_2010: DNA adenine methyltransferase; EbC_00990; phage(gi418489691)  3e-51  Click
12 complement(111348..111620)  hypothetical protein; EbC_01000  N/A  Click
13 111848..114097  PHAGE_Entero_P2: gpA; EbC_01010; phage(gi9630366)  5e-107  Click
14 116413..117411  hypothetical protein; EbC_01020  N/A  Click
15 complement(118451..119521)  PHAGE_Salmon_RE_2010: capsid packaging protein; EbC_01030; phage(gi418489696)  2e-108  Click
16 complement(119525..121063)  PHAGE_Entero_P2: gpP; EbC_01040; phage(gi9630329)  8e-140  Click
17 121387..122223  PHAGE_Salmon_RE_2010: capsid scaffolding protein; EbC_01050; phage(gi418489698)  6e-61  Click
18 122253..123302  PHAGE_Burkho_2: gp2, phage major capsid protein, P2 family; EbC_01060; phage(gi134288735)  2e-91  Click
19 123350..124300  PHAGE_Ralsto_phiRSA1: terminase; EbC_01070; phage(gi145708083)  3e-37  Click
20 124398..124892  PHAGE_Burkho_phiE202: gp48, phage head completion protein (GPL); EbC_01080; phage(gi134288751)  7e-26  Click
21 124892..125095  PHAGE_Entero_P2: gpX; EbC_01090; phage(gi9630334)  5e-14  Click
22 125086..125379  hypothetical protein; EbC_01100  N/A  Click
23 125376..125921  PHAGE_Mannhe_phiMHaA1: endolysin; EbC_01110; phage(gi109289945)  2e-48  Click
24 125921..126340  hypothetical protein; EbC_01120  N/A  Click
25 126345..126473  hypothetical protein; EbC_01130  N/A  Click
26 126463..126948  PHAGE_Ralsto_phiRSA1: tail completion protein-like protein; EbC_01140; phage(gi145708090)  5e-21  Click
27 126948..127592  PHAGE_Pseudo_phiCTX: predicted tail completion; EbC_01150; phage(gi17313233)  8e-17  Click
28 127589..128143  PHAGE_Entero_P2: gpV; EbC_01160; phage(gi9630342)  2e-34  Click
29 128161..128484  PHAGE_Erwini_ENT90: baseplate assembly protein; EbC_01170; phage(gi431810974)  9e-21  Click
30 128481..129392  PHAGE_Entero_P2: gpJ; EbC_01180; phage(gi9630344)  2e-102  Click
31 129385..129990  PHAGE_Entero_P2: gpI; EbC_01190; phage(gi9630345)  2e-56  Click
32 129987..131102  PHAGE_Erwini_ENT90: phage tail collar domain protein; EbC_01200; phage(gi431810938)  1e-74  Click
33 131102..131692  PHAGE_Entero_mEp213: tail fiber assembly protein; EbC_01210; phage(gi428782612)  4e-36  Click
34 complement(131726..132157)  PHAGE_Entero_P2: gpU; EbC_01220; phage(gi9630354)  2e-33  Click
35 complement(132164..135355)  PHAGE_Salmon_RE_2010: tail tape measure protein; EbC_01230; phage(gi418489724)  0.0  Click
36 complement(135501..135800)  PHAGE_Entero_P2: gpE; EbC_01240; phage(gi9630351)  5e-13  Click
37 complement(135862..136374)  PHAGE_Entero_P2: gpFII; EbC_01250; phage(gi9630350)  3e-38  Click
38 complement(136385..137572)  PHAGE_Entero_P2: gpFI; EbC_01260; phage(gi9630349)  5e-116  Click
39 137596..138831  PHAGE_Entero_P2: gpD; EbC_01270; phage(gi9630355)  2e-91  Click
40 138892..139131  PHAGE_Entero_P2: Ogr; EbC_01280; phage(gi9630356)  6e-09  Click
41 139240..139539  PHAGE_Bacill_PM1: hypothetical protein; EbC_01290; phage(gi472438254)  4e-20  Click
42 139664..139678  attR    CACCATCCCTGTCTT  N/A  Click
43 139753..140655  Cation-efflux pump FieF; EbC_01300  N/A  Click
44 140863..141825  PHAGE_Ostreo_OlV5: 6-phosphofructokinase; EbC_01310; phage(gi472341206)  1e-17  Click
Region 2, total : 44 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1245185..1246102)  PHAGE_Acanth_mimivirus: putative band 7 family protein; EbC_10740; phage(gi311978011)  1e-24  Click
2 complement(1246200..1247057)  thioredoxin-like protein; EbC_10750  N/A  Click
3 complement(1247135..1247908)  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; EbC_10760; phage(gi116326757)  5e-06  Click
4 1248003..1248022  attL    CTGTCGCCATTTTGTCGCCA  N/A  Click
5 complement(1248024..1249064)  PHAGE_Entero_2: P2 Int-like protein; EbC_10770; phage(gi169936064)  1e-106  Click
6 complement(1249073..1249669)  PHAGE_Entero_2: P2 CI-like protein; EbC_10780; phage(gi169936063)  8e-34  Click
7 1249765..1250019  PHAGE_Entero_2: bacteriophage regulatory protein Ap1; EbC_10790; phage(gi169936062)  1e-07  Click
8 1250032..1250541  PHAGE_Entero_2: bacteriophage regulatory protein CII; EbC_10800; phage(gi169936061)  4e-51  Click
9 1250704..1251045  PHAGE_Entero_2: hypothetical protein STM2733.Fels2; EbC_10810; phage(gi169936058)  7e-32  Click
10 1251113..1251340  PHAGE_Entero_2: hypothetical protein STM2732.Fels2; EbC_10820; phage(gi169936057)  2e-14  Click
11 1251340..1251567  PHAGE_Entero_2: P2 gpOrf82-like protein; EbC_10830; phage(gi169936056)  2e-12  Click
12 1251564..1252418  PHAGE_Entero_2: DNA adenine methylase-like protein; EbC_10840; phage(gi169936055)  2e-88  Click
13 1252415..1253167  PHAGE_Salmon_SPN3UB: hypothetical protein; EbC_10850; phage(gi423262431)  5e-101  Click
14 1253164..1255425  PHAGE_Erwini_ENT90: replication protein A; EbC_10860; phage(gi431810936)  0.0  Click
15 1255530..1255721  hypothetical protein; EbC_10870  N/A  Click
16 1256249..1256980  hypothetical protein; EbC_10880  N/A  Click
17 complement(1257023..1258060)  PHAGE_Entero_2: P2 gpQ-like protein; EbC_10890; phage(gi169936049)  5e-170  Click
18 complement(1258060..1259826)  PHAGE_Entero_2: P2 gpP-like protein; EbC_10900; phage(gi169936048)  0.0  Click
19 1259970..1260824  PHAGE_Entero_2: P2 gpO-like protein; EbC_10910; phage(gi169936047)  2e-119  Click
20 1260841..1261902  PHAGE_Entero_2: P2 gpN-like major capsid protein; EbC_10920; phage(gi169936046)  4e-170  Click
21 1261906..1262556  PHAGE_Entero_2: P2 gpM-like protein; EbC_10930; phage(gi169936045)  3e-92  Click
22 1262657..1263127  PHAGE_Entero_2: P2 gpL-like protein; EbC_10940; phage(gi169936044)  8e-59  Click
23 1263127..1263330  PHAGE_Entero_2: P2 gpX-like tail protein; EbC_10950; phage(gi169936043)  5e-28  Click
24 1263337..1263546  PHAGE_Entero_2: lysis protein; EbC_10960; phage(gi169936042)  2e-20  Click
25 1263566..1264042  PHAGE_Entero_2: endolysin; EbC_10970; phage(gi169936041)  8e-72  Click
26 1264042..1264467  PHAGE_Entero_2: P2 LysB-like protein; EbC_10980; phage(gi169936038)  1e-45  Click
27 1264563..1264997  PHAGE_Entero_2: P2 gpR-like tail completion protein; EbC_10990; phage(gi169936036)  2e-54  Click
28 1264990..1265445  PHAGE_Entero_2: P2 gpS-like tail completion protein; EbC_11000; phage(gi169936035)  6e-47  Click
29 complement(1265803..1266795)  hypothetical protein; EbC_11010  N/A  Click
30 complement(1266788..1267843)  hypothetical protein; EbC_11020  N/A  Click
31 1268250..1268828  PHAGE_Entero_2: P2 gpV-like protein; EbC_11030; phage(gi169936034)  1e-86  Click
32 1268828..1269184  PHAGE_Entero_2: P2 gpW-like baseplate protein; EbC_11040; phage(gi169936033)  3e-39  Click
33 1269171..1270085  PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; EbC_11050; phage(gi169936032)  1e-104  Click
34 1270082..1270696  PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; EbC_11060; phage(gi169936031)  2e-88  Click
35 1270693..1271808  PHAGE_Entero_2: P2 gpH-like protein; EbC_11070; phage(gi169936030)  7e-66  Click
36 1271808..1272398  PHAGE_Entero_mEp213: tail fiber assembly protein; EbC_11080; phage(gi428782612)  1e-38  Click
37 1272518..1273690  PHAGE_Entero_2: P2 gpFI-like protein; EbC_11090; phage(gi169936025)  0.0  Click
38 1273703..1274218  PHAGE_Entero_2: P2 gpFII-like protein; EbC_11100; phage(gi169936024)  9e-88  Click
39 1274277..1274600  PHAGE_Entero_2: P2 gpE-like tail protein; EbC_11110; phage(gi169936023)  2e-29  Click
40 1274730..1277375  PHAGE_Entero_2: P2 gpT-like tail protein; EbC_11120; phage(gi169936021)  7e-132  Click
41 1277372..1277857  PHAGE_Entero_2: P2 gpU-like tail protein; EbC_11130; phage(gi169936020)  9e-63  Click
42 1277854..1278948  PHAGE_Entero_2: P2 gpD-like tail protein; EbC_11140; phage(gi169936019)  5e-154  Click
43 1279028..1279246  PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); EbC_11150; phage(gi169936018)  1e-21  Click
44 1279391..1279410  attR    CTGTCGCCATTTTGTCGCCA  N/A  Click
45 complement(1279512..1280135)  acyl-CoA thioesterase I; EbC_11160  N/A  Click
46 1280106..1280792  PHAGE_Plankt_PaV_LD: ABC transporter; EbC_11170; phage(gi371496158)  1e-31  Click
Region 3, total : 15 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3521948..3521962  attL    TTTTTTTATATCACC  N/A  Click
2 3531569..3532726  PROPHAGE_Escher_Sakai: putative prophage Sf6-like integrase; EbC_31530; phage(gi15832485)  3e-178  Click
3 complement(3533328..3533441)  hypothetical protein; EbC_31540  N/A  Click
4 complement(3533725..3534045)  PHAGE_Cronob_phiES15: hypothetical protein; EbC_31550; phage(gi401817615)  8e-14  Click
5 complement(3534047..3534187)  PHAGE_Cronob_phiES15: hypothetical protein; EbC_31560; phage(gi401817614)  3e-05  Click
6 complement(3534454..3535485)  PHAGE_Salmon_c341: O-polysaccharide acetyltransferase protein; EbC_31570; phage(gi255252697)  2e-15  Click
7 complement(3535610..3535756)  hypothetical protein; EbC_31580  N/A  Click
8 complement(3535771..3537537)  PHAGE_Equid__9: envelope glycoprotein J; EbC_31590; phage(gi216905924)  1e-09  Click
9 complement(3537609..3538271)  hypothetical protein; EbC_31600  N/A  Click
10 complement(3538272..3539342)  PHAGE_Bacill_vB_BceM_Bc431v3: putative baseplate protein; EbC_31610; phage(gi472437643)  1e-19  Click
11 complement(3539404..3539658)  phage tail protein; EbC_31620  N/A  Click
12 complement(3539779..3540378)  PHAGE_Salmon_ST64B: putative base plate assembly protein; EbC_31630; phage(gi23505463)  5e-10  Click
13 complement(3540375..3541322)  rhs element Vgr protein; EbC_31640  N/A  Click
14 complement(3541493..3542482)  hypothetical protein; EbC_31650  N/A  Click
15 3542596..3543138  PHAGE_Xantho_Xp10: protease of the ClpP family; EbC_31660; phage(gi32128420)  2e-07  Click
16 complement(3543178..3545478)  PHAGE_Ralsto_phiRSA1: bacteriophage tail protein gpT; EbC_31670; phage(gi145708104)  2e-32  Click
17 3545777..3545791  attR    TTTTTTTATATCACC  N/A  Click
Region 4, total : 27 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(3552551..3553675)  PHAGE_Vibrio_vB_VpaS_MAR10: major capsid protein; EbC_31800; phage(gi428782119)  3e-31  Click
2 complement(3553691..3554443)  PHAGE_Acinet_Bphi_B1251: hypothetical protein; EbC_31810; phage(gi423262006)  6e-68  Click
3 complement(3554569..3555969)  PHAGE_Escher_HK639: hypothetical protein; EbC_31820; phage(gi356870603)  8e-70  Click
4 complement(3555982..3557466)  PHAGE_Cronob_phiES15: terminase large subunit; EbC_31830; phage(gi401817592)  0.0  Click
5 complement(3557466..3558068)  PHAGE_Escher_HK639: terminase small subunit; EbC_31840; phage(gi356870601)  3e-80  Click
6 complement(3558072..3558275)  hypothetical protein; EbC_31850  N/A  Click
7 complement(3558773..3558895)  hypothetical protein; EbC_31860  N/A  Click
8 complement(3559225..3559434)  PHAGE_Bacill_phi105: immunity repressor; EbC_31870; phage(gi22855027)  2e-09  Click
9 complement(3559702..3559821)  PHAGE_Entero_SfV: putative Rz1 lytic protein; EbC_31880; phage(gi19549039)  4e-06  Click
10 complement(3559850..3560284)  PHAGE_Cronob_ENT47670: hypothetical protein; EbC_31890; phage(gi431810528)  1e-11  Click
11 complement(3560281..3560577)  PHAGE_Entero_P22: lysozyme; EbC_31900; phage(gi9635531)  2e-29  Click
12 complement(3560702..3561055)  PHAGE_Entero_P22: inhibitor of gene 13' protein holin; EbC_31910; phage(gi9635530)  8e-09  Click
13 complement(3561617..3562240)  PHAGE_Cronob_ENT47670: hypothetical protein; EbC_31920; phage(gi431810516)  7e-47  Click
14 complement(3562237..3562815)  PHAGE_Gifsy_1: NinG; EbC_31930; phage(gi169257246)  1e-41  Click
15 complement(3562942..3563148)  PHAGE_Salmon_SPN3UB: hypothetical protein; EbC_31940; phage(gi423262438)  2e-15  Click
16 complement(3563141..3563347)  PHAGE_Escher_HK75: NinH; EbC_31950; phage(gi356870727)  1e-13  Click
17 complement(3563712..3564143)  PHAGE_Cronob_ENT47670: putative ninB protein; EbC_31960; phage(gi431810524)  6e-40  Click
18 complement(3564643..3565347)  PHAGE_Stx2_c_I: P protein; EbC_31970; phage(gi20065922)  5e-53  Click
19 complement(3565344..3566291)  PHAGE_Stx2_c_I: O protein; EbC_31980; phage(gi20065919)  4e-49  Click
20 complement(3566288..3567121)  PHAGE_Salmon_E1: phage-related DNA-binding protein; EbC_31990; phage(gi170676297)  5e-52  Click
21 complement(3567155..3567493)  phage regulatory protein; EbC_32000  N/A  Click
22 complement(3567615..3567845)  PHAGE_Stx2_c_II: Cro protein; EbC_32010; phage(gi302393139)  3e-18  Click
23 3567903..3568601  PHAGE_Entero_HK140: prophage repressor; EbC_32020; phage(gi428781988)  8e-77  Click
24 3568664..3568885  hypothetical protein; EbC_32030  N/A  Click
25 3569562..3569885  PHAGE_Salmon_ST160: regulatory protein; EbC_32040; phage(gi318065924)  4e-16  Click
26 3570685..3570897  hypothetical protein; EbC_32050  N/A  Click
27 3571594..3571881  PHAGE_Entero_HK629: transcription antitermination protein N; EbC_32060; phage(gi428782056)  4e-13  Click
Region 5, total : 14 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4389602..4389616  attL    TACAACTGGGCACAC  N/A  Click
2 4402909..4404639  PHAGE_Cafete_BV_PW1: putative DNA N6-adenine methyltransferase; EbC_39470; phage(gi310831004)  6e-18  Click
3 4404650..4405756  hypothetical protein; EbC_39480  N/A  Click
4 4406321..4406446  hypothetical protein; EbC_39490  N/A  Click
5 complement(4406679..4407242)  hypothetical protein; EbC_39500  N/A  Click
6 complement(4407434..4409764)  PHAGE_Entero_P4: DNA primase; EbC_39510; phage(gi9627512)  0.0  Click
7 complement(4409778..4410101)  PHAGE_Entero_P4: hypothetical protein P4p07; EbC_39520; phage(gi9627513)  3e-36  Click
8 complement(4410098..4410322)  hypothetical protein; EbC_39530  N/A  Click
9 complement(4410319..4410858)  PHAGE_Entero_P4: putative CI repressor; EbC_39540; phage(gi9627516)  1e-32  Click
10 complement(4411081..4411347)  PHAGE_Entero_P4: transcriptional regulator; EbC_39550; phage(gi9627517)  1e-22  Click
11 4411887..4412642  PHAGE_Entero_P4: head size determination protein sid; EbC_39560; phage(gi9627518)  6e-07  Click
12 4412639..4413187  PHAGE_Entero_P4: amber mutation-suppressing protein; EbC_39570; phage(gi9627520)  5e-11  Click
13 4413189..4413461  PHAGE_Yersin_413C: Ogr; EbC_39580; phage(gi30065732)  1e-11  Click
14 4414063..4416537  hypothetical protein; EbC_39590  N/A  Click
15 complement(4416594..4417847)  PHAGE_Entero_P4: integrase; EbC_39600; phage(gi9627511)  0.0  Click
16 4430642..4430656  attR    TACAACTGGGCACAC  N/A  Click
Region 6, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4924727..4924739  attL    ACCGCTGGCGGCC  N/A  Click
2 complement(4933383..4934330)  PHAGE_Aeromo_phiAS5: hypothetical protein; EbC_44470; phage(gi310722709)  3e-31  Click
3 complement(4934776..4935759)  hypothetical protein; EbC_44480  N/A  Click
4 complement(4936659..4938989)  PHAGE_Entero_P4: DNA primase; EbC_44490; phage(gi9627512)  0.0  Click
5 complement(4939004..4939327)  PHAGE_Entero_P4: hypothetical protein P4p07; EbC_44500; phage(gi9627513)  1e-35  Click
6 complement(4939324..4939548)  hypothetical protein; EbC_44510  N/A  Click
7 complement(4939545..4940084)  PHAGE_Entero_P4: putative CI repressor; EbC_44520; phage(gi9627516)  4e-27  Click
8 complement(4940093..4940311)  hypothetical protein; EbC_44530  N/A  Click
9 complement(4940308..4940574)  PHAGE_Entero_P4: transcriptional regulator; EbC_44540; phage(gi9627517)  2e-24  Click
10 4941118..4941870  PHAGE_Entero_P4: head size determination protein sid; EbC_44550; phage(gi9627518)  5e-11  Click
11 4941867..4942415  PHAGE_Entero_P4: amber mutation-suppressing protein; EbC_44560; phage(gi9627520)  1e-12  Click
12 4942417..4942689  PHAGE_Yersin_413C: Ogr; EbC_44570; phage(gi30065732)  6e-12  Click
13 4943361..4944848  PHAGE_Entero_P2: Fun(Z); EbC_44580; phage(gi9630348)  2e-05  Click
14 complement(4945226..4946401)  PROPHAGE_Escher_CFT073: putative prophage integrase; EbC_44590; phage(gi26250313)  3e-162  Click
15 4946598..4946610  attR    ACCGCTGGCGGCC  N/A  Click