| Definition | Starkeya novella DSM 506 chromosome, complete genome. |
|---|---|
| Accession | NC_014217 |
| Length | 4,765,023 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 27 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 434..1672 | PHAGE_Pelagi_HTVC010P: hypothetical protein; Snov_0002; phage(gi460042303) | 3e-05 | Click |
| 2 | 1669..2010 | PHAGE_Roseop_DSS3P2: N4 gp22-like protein; Snov_0003; phage(gi237651583) | 5e-13 | Click |
| 3 | 2010..3509 | PHAGE_Mycoba_Porky: gp98; Snov_0004; phage(gi194303394) | 5e-75 | Click |
| 4 | 3506..3820 | hypothetical protein; Snov_0005 | N/A | Click |
| 5 | 3820..4539 | hypothetical protein; Snov_0006 | N/A | Click |
| 6 | 4536..5234 | PHAGE_Prochl_P_SSP7: hypothetical protein; Snov_0007; phage(gi61806403) | 2e-36 | Click |
| 7 | 5231..6295 | hypothetical protein; Snov_0008 | N/A | Click |
| 8 | 6307..6900 | hypothetical protein; Snov_0009 | N/A | Click |
| 9 | 6984..7343 | PHAGE_Rhodob_RcapNL: HNH endonuclease; Snov_0010; phage(gi461474959) | 4e-33 | Click |
| 10 | 7443..7940 | PHAGE_Rhodob_RcapNL: hypothetical protein; Snov_0011; phage(gi461474960) | 3e-10 | Click |
| 11 | 7940..9658 | PHAGE_Rhodob_RcapNL: large terminase; Snov_0012; phage(gi461474961) | 5e-123 | Click |
| 12 | 9663..10994 | PHAGE_Salmon_ST64B: Portal Protein; Snov_0013; phage(gi23505449) | 3e-54 | Click |
| 13 | 10984..11865 | PHAGE_Entero_mEp235: head maturation protease; Snov_0014; phage(gi428781814) | 9e-63 | Click |
| 14 | 11875..13257 | PHAGE_Entero_phiP27: putative major capsid protein; Snov_0015; phage(gi18249904) | 1e-80 | Click |
| 15 | 13324..13587 | K05508 C-X3-C chemokine 1-like protein; Snov_0016 | N/A | Click |
| 16 | 13591..13908 | PHAGE_Entero_mEp235: head-tail connector II; Snov_0017; phage(gi428781817) | 3e-05 | Click |
| 17 | 13911..14261 | PHAGE_Rhodob_RcapNL: phage head-tail adapter protein; Snov_0018; phage(gi461474968) | 3e-08 | Click |
| 18 | 14261..14455 | hypothetical protein; Snov_0019 | N/A | Click |
| 19 | 14442..14912 | PHAGE_Rhizob_3: p011; Snov_0020; phage(gi195546542) | 2e-19 | Click |
| 20 | 14909..15331 | PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; Snov_0021; phage(gi461474971) | 7e-09 | Click |
| 21 | 15389..15835 | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; Snov_0022; phage(gi461474972) | 7e-05 | Click |
| 22 | 15828..16394 | PHAGE_Rhizob_3: p015; Snov_0023; phage(gi195546546) | 1e-13 | Click |
| 23 | 16398..18404 | PHAGE_Pseudo_B3: tail length tape measure protein; Snov_0024; phage(gi56692618) | 1e-41 | Click |
| 24 | 18407..19057 | hypothetical protein; Snov_0025 | N/A | Click |
| 25 | 19054..19680 | hypothetical protein; Snov_0026 | N/A | Click |
| 26 | 19697..20101 | PHAGE_Yersin_PY54: hypothetical protein PY54p19; Snov_0027; phage(gi33770528) | 1e-08 | Click |
| 27 | 20105..22708 | PHAGE_Rhizob_3: putative tail fiber protein H; Snov_0028; phage(gi195546553) | 8e-08 | Click |
Region 2, total : 25 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 728887..730173 | PHAGE_Strept_6: terminase large subunit; Snov_0699; phage(gi93007440) | 2e-62 | Click |
| 2 | complement(730175..731317) | endonuclease/exonuclease/phosphatase family protein; Snov_0700 | N/A | Click |
| 3 | 731446..732615 | PHAGE_Marino_P12026: phage portal protein, HK97 family; Snov_0701; phage(gi399528319) | 1e-28 | Click |
| 4 | 732679..732867 | hypothetical protein; Snov_0702 | N/A | Click |
| 5 | 732864..733031 | hypothetical protein; Snov_0703 | N/A | Click |
| 6 | 733034..733597 | PHAGE_Azospi_Cd: phage head maturation protease; Snov_0704; phage(gi168495135) | 1e-27 | Click |
| 7 | 733828..735096 | PHAGE_Salmon_ST64B: Major capsid protein precursor; Snov_0705; phage(gi23505451) | 2e-78 | Click |
| 8 | complement(735174..735380) | hypothetical protein; Snov_0706 | N/A | Click |
| 9 | complement(735581..736300) | PHAGE_Neodip_NPV: hypothetical protein; Snov_0707; phage(gi48843635) | 5e-13 | Click |
| 10 | 736402..736968 | PHAGE_Rhodob_RcapNL: hypothetical protein; Snov_0708; phage(gi461474967) | 7e-11 | Click |
| 11 | 736965..737285 | phage head-tail adaptor; Snov_0709 | N/A | Click |
| 12 | 737359..737763 | PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; Snov_0710; phage(gi461474971) | 1e-10 | Click |
| 13 | 737989..738396 | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; Snov_0711; phage(gi461474972) | 8e-21 | Click |
| 14 | 738574..738927 | gene transfer agent (GTA) like protein; Snov_0712 | N/A | Click |
| 15 | 738924..739124 | hypothetical protein; Snov_0713 | N/A | Click |
| 16 | 739140..739748 | PHAGE_Shigel_EP23: phage tail length tape-measure protein 1; Snov_0714; phage(gi371496286) | 3e-17 | Click |
| 17 | 739748..740389 | PHAGE_Roseob_1: putative glycoside hydrolase; Snov_0715; phage(gi331028135) | 5e-37 | Click |
| 18 | 740386..741249 | PHAGE_Roseob_1: gene transfer agent; Snov_0716; phage(gi331028136) | 1e-62 | Click |
| 19 | 741249..741680 | PHAGE_Roseob_1: phage cell wall peptidase; Snov_0717; phage(gi331028137) | 2e-29 | Click |
| 20 | 741797..745699 | PHAGE_Roseob_1: gene transfer agent; Snov_0718; phage(gi331028138) | 0.0 | Click |
| 21 | 745992..746681 | PHAGE_Roseob_1: ribonuclease III; Snov_0719; phage(gi331028139) | 2e-19 | Click |
| 22 | 746693..746998 | hypothetical protein; Snov_0720 | N/A | Click |
| 23 | 747000..747875 | PHAGE_Synech_S_CBS4: hypothetical protein; Snov_0721; phage(gi374531801) | 8e-16 | Click |
| 24 | complement(747883..748224) | hypothetical protein; Snov_0722 | N/A | Click |
| 25 | 748366..749163 | PHAGE_Agroba_7_7_1: hypothetical protein; Snov_0723; phage(gi435844350) | 1e-43 | Click |
Region 3, total : 19 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2161399..2162133) | PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; Snov_2053; phage(gi116326757) | 1e-21 | Click |
| 2 | 2162221..2162619 | HxlR family transcriptional regulator; Snov_2054 | N/A | Click |
| 3 | complement(2162635..2163027) | endoribonuclease L-PSP; Snov_2055 | N/A | Click |
| 4 | complement(2163083..2163229) | hypothetical protein; Snov_2056 | N/A | Click |
| 5 | 2163439..2163457 | attL GCTGGTGCGGACGACGGGA | N/A | Click |
| 6 | 2163564..2165255 | PROPHAGE_Escher_Sakai: putative integrase; Snov_2057; phage(gi15834496) | 7e-16 | Click |
| 7 | 2165405..2166649 | PHAGE_Klebsi_phiKO2: putative portal protein; Snov_2058; phage(gi46402090) | 4e-53 | Click |
| 8 | 2166642..2167016 | PHAGE_Rhodob_RcapNL: hypothetical protein; Snov_2059; phage(gi461474973) | 4e-05 | Click |
| 9 | 2167113..2167619 | PHAGE_Salmon_ST64B: Pro-head protease; Snov_2060; phage(gi23505450) | 6e-18 | Click |
| 10 | 2167630..2168769 | PHAGE_Entero_phiP27: putative major capsid protein; Snov_2061; phage(gi18249904) | 5e-37 | Click |
| 11 | 2168773..2169348 | hypothetical protein; Snov_2062 | N/A | Click |
| 12 | 2169345..2169695 | PHAGE_Bacill_phi105: hypothetical protein phi105_50; Snov_2063; phage(gi22855043) | 1e-16 | Click |
| 13 | 2169692..2170660 | hypothetical protein; Snov_2064 | N/A | Click |
| 14 | 2170664..2170927 | hypothetical protein; Snov_2065 | N/A | Click |
| 15 | 2170929..2171333 | PHAGE_Rhizob_3: p011; Snov_2066; phage(gi195546542) | 3e-16 | Click |
| 16 | 2171333..2171740 | hypothetical protein; Snov_2067 | N/A | Click |
| 17 | 2171737..2172054 | phage head-tail adaptor; Snov_2068 | N/A | Click |
| 18 | 2172051..2172464 | PHAGE_Entero_phiP27: hypothetical protein P27p35; Snov_2069; phage(gi18249899) | 2e-09 | Click |
| 19 | 2172464..2174083 | PHAGE_Entero_phiP27: putative terminase; Snov_2070; phage(gi18249900) | 3e-39 | Click |
| 20 | 2174083..2176032 | PHAGE_Burkho_phiE125: putative tail length tape measure protein; Snov_2071; phage(gi17975176) | 5e-24 | Click |
| 21 | 2181150..2181168 | attR GCTGGTGCGGACGACGGGA | N/A | Click |