Definition Segniliparus rotundus DSM 44985 chromosome, complete genome.
Accession NC_014168
Length 3,157,527
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 31 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 36087..36098  attL    GGGCTGTTGTCA  N/A  Click
2 42807..43085  PHAGE_Mycoba_BPs: hypothetical protein BPs1_62; Srot_0060; phage(gi189043149)  3e-20  Click
3 43082..43267  hypothetical protein; Srot_0061  N/A  Click
4 43504..43767  PHAGE_Mycoba_Angelica: gp7; Srot_0062; phage(gi304360764)  1e-08  Click
5 43751..45166  PHAGE_Mycoba_BPs: hypothetical protein BPs1_2; Srot_0063; phage(gi189043089)  6e-145  Click
6 45163..46566  PHAGE_Mycoba_BPs: portal protein; Srot_0064; phage(gi189043090)  1e-141  Click
7 46550..47233  PHAGE_Mycoba_Che9d: gp5; Srot_0065; phage(gi29566412)  1e-22  Click
8 47285..47761  PHAGE_Mycoba_BPs: hypothetical protein BPs1_6; Srot_0066; phage(gi189043093)  3e-13  Click
9 47788..48696  PHAGE_Mycoba_BPs: capsid protein; Srot_0067; phage(gi189043094)  6e-84  Click
10 48841..49308  PHAGE_Mycoba_BPs: hypothetical protein BPs1_9; Srot_0068; phage(gi189043096)  3e-35  Click
11 49305..49646  PHAGE_Mycoba_BPs: hypothetical protein BPs1_10; Srot_0069; phage(gi189043097)  9e-05  Click
12 49647..49955  hypothetical protein; Srot_0070  N/A  Click
13 49959..50357  hypothetical protein; Srot_0071  N/A  Click
14 50395..51042  PHAGE_Mycoba_BPs: major tail subunit; Srot_0072; phage(gi189043100)  2e-14  Click
15 51039..51371  hypothetical protein; Srot_0073  N/A  Click
16 51380..51763  PHAGE_Mycoba_BPs: potential virion protein; Srot_0074; phage(gi189043102)  1e-10  Click
17 51744..55466  PHAGE_Gordon_GRU1: tape measure protein; Srot_0075; phage(gi359802386)  9e-83  Click
18 55466..56728  PHAGE_Mycoba_BPs: minor tail protein; Srot_0076; phage(gi189043104)  6e-22  Click
19 56728..58500  PHAGE_Mycoba_BPs: minor tail protein; Srot_0077; phage(gi189043105)  4e-91  Click
20 58500..58751  hypothetical protein; Srot_0078  N/A  Click
21 58751..59812  PHAGE_Mycoba_BPs: minor tail protein; Srot_0079; phage(gi189043107)  5e-39  Click
22 59814..61079  PHAGE_Gordon_GTE2: hypothetical protein; Srot_0080; phage(gi338826879)  3e-14  Click
23 61144..62403  PHAGE_Mycoba_Omega: gp50; Srot_0081; phage(gi29566787)  2e-67  Click
24 62400..62756  hypothetical protein; Srot_0082  N/A  Click
25 63031..63237  hypothetical protein; Srot_0084  N/A  Click
26 63230..63589  PHAGE_Rhodoc_REQ2: putative holin; Srot_0085; phage(gi372449847)  3e-05  Click
27 complement(63716..64015)  hypothetical protein; Srot_0086  N/A  Click
28 complement(64012..64293)  hypothetical protein; Srot_0087  N/A  Click
29 complement(64298..64633)  hypothetical protein; Srot_0088  N/A  Click
30 complement(64630..64902)  hypothetical protein; Srot_0089  N/A  Click
31 complement(64902..66164)  hypothetical protein; Srot_0090  N/A  Click
32 66032..66043  attR    GGGCTGTTGTCA  N/A  Click
33 complement(66247..67296)  PHAGE_Mycoba_BPs: integrase; Srot_0091; phage(gi189043119)  7e-15  Click
Region 2, total : 36 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1139444..1139455  attL    GGGCGGTTGCGG  N/A  Click
2 complement(1140765..1141634)  PROPHAGE_Escher_CFT073: transposase insF; Srot_1156; phage(gi26250329)  7e-50  Click
3 complement(1141631..1141948)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; Srot_1157; phage(gi24373865)  4e-10  Click
4 complement(1142010..1142369)  PHAGE_Mycoba_Giles: gp14; Srot_1158; phage(gi160700663)  3e-15  Click
5 complement(1142366..1142698)  hypothetical protein; Srot_1159  N/A  Click
6 complement(1142709..1143020)  PHAGE_Mycoba_Giles: gp12; Srot_1160; phage(gi160700661)  9e-05  Click
7 1143056..1143292  hypothetical protein; Srot_1161  N/A  Click
8 complement(1143298..1143807)  PHAGE_Coryne_BFK20: gp8; Srot_1162; phage(gi157168381)  3e-13  Click
9 complement(1143813..1144004)  hypothetical protein; Srot_1163  N/A  Click
10 complement(1144022..1145302)  PHAGE_Coryne_BFK20: gp6, major capsid protein; Srot_1164; phage(gi157168379)  2e-71  Click
11 complement(1145299..1145991)  PHAGE_Coryne_BFK20: gp5, head maturation protease; Srot_1165; phage(gi157168378)  6e-42  Click
12 complement(1145948..1147249)  PHAGE_Coryne_BFK20: gp3, phage portal protein; Srot_1166; phage(gi157168376)  3e-78  Click
13 complement(1147274..1148770)  PHAGE_Coryne_BFK20: gp2, terminase; Srot_1167; phage(gi157168375)  2e-82  Click
14 1148841..1148852  attR    GGGCGGTTGCGG  N/A  Click
15 1149335..1149841  hypothetical protein; Srot_1169  N/A  Click
16 1150080..1150580  hypothetical protein; Srot_1170  N/A  Click
17 complement(1150720..1151001)  hypothetical protein; Srot_1171  N/A  Click
18 complement(1151045..1151320)  PHAGE_Coryne_BFK20: gp55, HNH endonuclease; Srot_1172; phage(gi157168428)  1e-13  Click
19 complement(1151326..1152444)  PHAGE_Thermu_26: C5 cytosine-specific DNA methylase; Srot_1173; phage(gi157265426)  5e-25  Click
20 complement(1152429..1152662)  PHAGE_Rhodoc_REQ2: hypothetical protein; Srot_1174; phage(gi372449902)  4e-06  Click
21 complement(1152853..1153509)  PHAGE_Rhodoc_REQ2: hypothetical protein; Srot_1175; phage(gi372449901)  4e-07  Click
22 complement(1153506..1153754)  two-component system sensor protein; Srot_1176  N/A  Click
23 complement(1153751..1154008)  hypothetical protein; Srot_1177  N/A  Click
24 complement(1154012..1154389)  PHAGE_Mycoba_Ramsey: gp78; Srot_1178; phage(gi206600259)  2e-15  Click
25 complement(1154389..1155183)  PHAGE_Rhodoc_REQ3: hypothetical protein; Srot_1179; phage(gi372449985)  6e-33  Click
26 complement(1155187..1155612)  hypothetical protein; Srot_1180  N/A  Click
27 complement(1155609..1155995)  hypothetical protein; Srot_1181  N/A  Click
28 complement(1156014..1156796)  PHAGE_Mycoba_Corndog: gp15; Srot_1182; phage(gi29566299)  2e-44  Click
29 complement(1156793..1157083)  hypothetical protein; Srot_1183  N/A  Click
30 complement(1157080..1157307)  hypothetical protein; Srot_1184  N/A  Click
31 complement(1157304..1157678)  PHAGE_Mycoba_Corndog: gp13; Srot_1185; phage(gi29566297)  8e-09  Click
32 complement(1157757..1158599)  PHAGE_Vibrio_11895_B1: hypothetical protein; Srot_1186; phage(gi472340071)  6e-18  Click
33 complement(1158605..1159525)  PHAGE_Staphy_EW: ORF013; Srot_1187; phage(gi66395820)  1e-20  Click
34 complement(1159522..1159776)  hypothetical protein; Srot_1188  N/A  Click
35 1159861..1160289  hypothetical protein; Srot_1189  N/A  Click
36 1160403..1161263  hypothetical protein; Srot_1190  N/A  Click
37 1161230..1161493  PHAGE_Mycoba_Che9c: gp42; Srot_1191; phage(gi29566150)  7e-11  Click
38 1161597..1162952  PHAGE_Rhodoc_REQ3: phage integrase; Srot_1192; phage(gi372449972)  6e-84  Click