Definition Thiomonas intermedia K12 chromosome, complete genome.
Accession NC_014153
Length 3,396,378
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 24 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2102507..2102707  PHAGE_Burkho_phiE125: hypothetical protein phiE125p70; Tint_1963; phage(gi17975231)  9e-11  Click
2 2102762..2103130  PHAGE_Burkho_phiE125: putative helix-turn-helix transcriptional regulator; Tint_1964; phage(gi17975230)  5e-27  Click
3 2103319..2103585  PHAGE_Burkho_phi52237: pANL56; Tint_1965; phage(gi72537723)  3e-10  Click
4 2103572..2103907  PHAGE_Burkho_phi52237: hypothetical protein BPSphi5223_0048; Tint_1966; phage(gi117676336)  5e-11  Click
5 complement(2103949..2104191)  hypothetical protein; Tint_1967  N/A  Click
6 complement(2104193..2105923)  PHAGE_Human__4: EBNA-1; Tint_1968; phage(gi82503233)  2e-18  Click
7 complement(2105933..2106631)  P-type conjugative transfer protein TrbJ; Tint_1969  N/A  Click
8 complement(2106653..2107459)  PHAGE_Escher_phiKT: tail fiber protein; Tint_1970; phage(gi422936632)  8e-10  Click
9 complement(2108039..2110489)  CagE, TrbE, VirB component of type IV transporter system, conserved region; Tint_1971  N/A  Click
10 complement(2110486..2110785)  Conjugal transfer TrbD family protein; Tint_1972  N/A  Click
11 complement(2110782..2110976)  hypothetical protein; Tint_1973  N/A  Click
12 complement(2110979..2111332)  Conjugal transfer protein TrbC; Tint_1974  N/A  Click
13 complement(2111413..2111994)  Peptidase S26, conserved region; Tint_1975  N/A  Click
14 complement(2112061..2113419)  HipA N-terminal domain protein; Tint_1976  N/A  Click
15 complement(2113397..2113693)  XRE family transcriptional regulator; Tint_1977  N/A  Click
16 complement(2113734..2115665)  TRAG family protein; Tint_1978  N/A  Click
17 complement(2115811..2118435)  PHAGE_Caulob_phiCbK: putative ArdC-like antirestriction protein; Tint_1979; phage(gi414087906)  2e-28  Click
18 complement(2118428..2118589)  peptidase S9 prolyl oligopeptidase active site domain protein; Tint_1980  N/A  Click
19 complement(2118667..2121192)  PHAGE_Human__8: LANA; Tint_1981; phage(gi139472804)  8e-08  Click
20 complement(2121406..2122710)  PHAGE_Stx2_c_1717: transposase; Tint_1983; phage(gi209447153)  7e-84  Click
21 complement(2122723..2124264)  PHAGE_Stx2_c_1717: transposase; Tint_1984; phage(gi209447153)  2e-97  Click
22 complement(2124334..2124675)  PHAGE_Stx2_c_1717: transposase; Tint_1985; phage(gi209447152)  1e-11  Click
23 complement(2124680..2125048)  transposase IS3/IS911 family protein; Tint_1986  N/A  Click
24 complement(2125551..2126546)  PHAGE_Lactoc_P087: putative cysteine synthase; Tint_1987; phage(gi229605000)  1e-06  Click
Region 2, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3074434..3074447  attL    CGAAGCCACCTTTC  N/A  Click
2 3079493..3080356  PHAGE_Equid__1: envelope glycoprotein J; Tint_2907; phage(gi50313312)  2e-05  Click
3 3080492..3080788  PROPHAGE_Xantho_33913: ISxac3 transposase; Tint_2908; phage(gi21231087)  2e-11  Click
4 complement(3081714..3082196)  hypothetical protein; Tint_2910  N/A  Click
5 complement(3082486..3083781)  PHAGE_Cronob_ENT39118: DNA polymerase; Tint_2912; phage(gi431811050)  9e-84  Click
6 complement(3083791..3084288)  PHAGE_Cronob_ENT39118: protein umuD; Tint_2913; phage(gi431811072)  1e-13  Click
7 3084356..3085027  PHAGE_Burkho_KS9: hypothetical protein gp28; Tint_2914; phage(gi255033760)  7e-32  Click
8 3085256..3090286  PHAGE_Africa_virus: helicase; Tint_2915; phage(gi9628148)  8e-12  Click
9 3091864..3091877  attR    CGAAGCCACCTTTC  N/A  Click
10 complement(3092088..3092984)  PROPHAGE_Escher_CFT073: transposase insF; Tint_2917; phage(gi26249410)  9e-58  Click
11 complement(3092981..3093277)  PROPHAGE_Xantho_33913: ISxac3 transposase; Tint_2918; phage(gi21231087)  2e-11  Click