Definition Yersinia pestis Z176003 plasmid pMT1, complete sequence.
Accession NC_014022
Length 94,251
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 56 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 87..1109  PROPHAGE_Escher_CFT073: transposase; YPZ3_pMT0001; phage(gi26248360)  0.0  Click
2 1001..1013  attL    GAAAAAAGAGTAT  N/A  Click
3 1109..1888  PROPHAGE_Escher_CFT073: transposase/IS protein; YPZ3_pMT0002; phage(gi26248359)  1e-142  Click
4 complement(2022..2630)  PHAGE_Entero_HK630: tail fiber assembly protein; YPZ3_pMT0003; phage(gi428782810)  3e-66  Click
5 complement(2932..5820)  PHAGE_Salmon_SSU5: putative phage tail fiber protein; YPZ3_pMT0004; phage(gi410491431)  3e-118  Click
6 complement(5901..6533)  PHAGE_Entero_phiP27: hypothetical protein P27p57; YPZ3_pMT0005; phage(gi18249921)  3e-22  Click
7 complement(6536..11167)  PHAGE_Salmon_SSU5: putative phage tail protein; YPZ3_pMT0006; phage(gi410491430)  0.0  Click
8 complement(11189..11776)  PHAGE_Salmon_SSU5: putative phage tail protein; YPZ3_pMT0007; phage(gi410491429)  1e-105  Click
9 complement(11764..12561)  PHAGE_Salmon_SSU5: putative phage tail protein; YPZ3_pMT0008; phage(gi410491428)  3e-156  Click
10 complement(12554..13252)  PHAGE_Salmon_SSU5: putative minor tail protein L; YPZ3_pMT0009; phage(gi410491427)  4e-137  Click
11 complement(13342..13677)  PHAGE_Salmon_SSU5: putative minor tail protein M; YPZ3_pMT0010; phage(gi410491426)  3e-60  Click
12 complement(13719..18296)  PHAGE_Salmon_SSU5: putative tail tape measure protein; YPZ3_pMT0011; phage(gi410491425)  0.0  Click
13 complement(18654..18971)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0012; phage(gi410491423)  2e-52  Click
14 complement(19031..19777)  PHAGE_Salmon_SSU5: putative Ig-like domain-containing protein; YPZ3_pMT0013; phage(gi410491422)  9e-135  Click
15 complement(19852..20235)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0014; phage(gi410491421)  6e-68  Click
16 complement(20237..20710)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0015; phage(gi410491420)  4e-84  Click
17 complement(20701..21045)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0016; phage(gi410491419)  1e-59  Click
18 complement(21143..21976)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0017; phage(gi410491418)  9e-155  Click
19 complement(21976..22410)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0018; phage(gi410491417)  1e-75  Click
20 complement(22454..23116)  PHAGE_Salmon_SSU5: putative Ig-like domain-containing protein; YPZ3_pMT0019; phage(gi410491416)  6e-114  Click
21 complement(23191..24066)  PHAGE_Salmon_SSU5: putative major capsid protein; YPZ3_pMT0020; phage(gi410491415)  4e-164  Click
22 complement(24093..24926)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0021; phage(gi410491414)  3e-149  Click
23 complement(24949..26523)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0022; phage(gi410491413)  0.0  Click
24 complement(26557..27813)  PHAGE_Salmon_SSU5: putative terminase large subunit; YPZ3_pMT0023; phage(gi410491412)  0.0  Click
25 complement(27816..28457)  PHAGE_Salmon_SSU5: putative DNA-binding protein; YPZ3_pMT0024; phage(gi410491411)  9e-116  Click
26 complement(28929..29828)  PHAGE_Salmon_SSU5: putative ABC transporter ATP-binding protein; YPZ3_pMT0025; phage(gi410491539)  1e-170  Click
27 complement(30072..30710)  PHAGE_Salmon_SSU5: putative ABC transporter ATP-binding protein; YPZ3_pMT0026; phage(gi410491537)  6e-113  Click
28 complement(30707..31375)  PHAGE_Salmon_SSU5: putative ParB-like nuclease domain-containing protein; YPZ3_pMT0027; phage(gi410491536)  8e-118  Click
29 complement(31375..32055)  PHAGE_Salmon_SSU5: putative ParB-like nuclease domain-containing protein; YPZ3_pMT0028; phage(gi410491535)  6e-124  Click
30 32138..33697  PHAGE_Salmon_SSU5: putative helicase; YPZ3_pMT0029; phage(gi410491534)  0.0  Click
31 34038..34460  PHAGE_Salmon_SSU5: putative lipoprotein; YPZ3_pMT0030; phage(gi410491532)  4e-65  Click
32 34465..34992  PHAGE_Salmon_SSU5: putative repressor of phase 1 flagellin; YPZ3_pMT0031; phage(gi410491531)  6e-82  Click
33 35315..35965  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0032; phage(gi410491530)  5e-118  Click
34 complement(36916..37398)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0033; phage(gi410491527)  3e-86  Click
35 complement(38085..38462)  PROPHAGE_Salmon_Ty2: transposase; YPZ3_pMT0034; phage(gi29143766)  2e-68  Click
36 complement(38752..39321)  PHAGE_Salmon_SSU5: putative ribonuclease H-like domain-containing protein; YPZ3_pMT0035; phage(gi410491487)  2e-105  Click
37 complement(39334..40080)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0036; phage(gi410491486)  4e-138  Click
38 complement(40070..41986)  PHAGE_Salmon_SSU5: putative exonuclease subunit 2; YPZ3_pMT0037; phage(gi410491485)  0.0  Click
39 complement(42216..43301)  PHAGE_Salmon_SSU5: putative exonuclease subunit 1; YPZ3_pMT0038; phage(gi410491483)  0.0  Click
40 43717..44739  putative periplasmic protein; YPZ3_pMT0039  N/A  Click
41 complement(45099..45743)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0040; phage(gi410491480)  1e-121  Click
42 46488..47552  PHAGE_Salmon_SSU5: putative replication protein RepA; YPZ3_pMT0041; phage(gi410491479)  0.0  Click
43 complement(48333..48668)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0042; phage(gi410491477)  5e-54  Click
44 complement(49228..49638)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0043; phage(gi410491474)  2e-76  Click
45 complement(49622..49993)  PHAGE_Salmon_SSU5: putative NinX-like protein; YPZ3_pMT0044; phage(gi410491473)  5e-62  Click
46 complement(50147..50977)  PHAGE_Salmon_SSU5: putative SPFH domain / band 7 protein; YPZ3_pMT0045; phage(gi410491472)  1e-153  Click
47 complement(51272..52348)  PHAGE_Salmon_SSU5: putative RecA-like recombinase; YPZ3_pMT0046; phage(gi410491470)  0.0  Click
48 complement(52617..53561)  PHAGE_Salmon_SSU5: DNA polymerase I; YPZ3_pMT0047; phage(gi410491468)  0.0  Click
49 complement(53622..54650)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0048; phage(gi410491467)  0.0  Click
50 complement(54770..55243)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0049; phage(gi410491466)  3e-75  Click
51 55746..56309  PHAGE_Salmon_SSU5: putative phage transcriptional regulator AlpA-like protein; YPZ3_pMT0050; phage(gi410491464)  1e-67  Click
52 complement(56339..56782)  PHAGE_Salmon_SSU5: hypothetical protein; YPZ3_pMT0051; phage(gi410491463)  7e-75  Click
53 complement(56779..60303)  PHAGE_Salmon_SSU5: DNA polymerase III alpha subunit; YPZ3_pMT0052; phage(gi410491462)  0.0  Click
54 complement(60484..61719)  PHAGE_Salmon_SSU5: putative porphyrin biosynthetic protein; YPZ3_pMT0053; phage(gi410491460)  0.0  Click
55 complement(61816..64182)  PHAGE_Salmon_SSU5: putative porphyrin biosynthetic protein; YPZ3_pMT0054; phage(gi410491459)  0.0  Click
56 64767..65153  hypothetical protein; YPZ3_pMT0055  N/A  Click
57 65064..65076  attR    GAAAAAAGAGTAT  N/A  Click
58 complement(65148..66308)  PHAGE_Salmon_vB_SosS_Oslo: integrase; YPZ3_pMT0056; phage(gi399528791)  2e-21  Click