Definition Nitrosococcus halophilus Nc4 chromosome, complete genome.
Accession NC_013960
Length 4,079,427
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 70 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 951127..951138  attL    TTATTATAATTC  N/A  Click
2 complement(957526..958287)  PHAGE_Entero_ST104: CI; Nhal_0949; phage(gi46358671)  1e-08  Click
3 958373..958618  PHAGE_Aggreg_S1249: phage protein; Nhal_0950; phage(gi273809591)  1e-08  Click
4 958615..958803  hypothetical protein; Nhal_0951  N/A  Click
5 958800..959072  hypothetical protein; Nhal_0952  N/A  Click
6 959122..959140  attL    CACCGGGACCGTTTGGGCC  N/A  Click
7 959269..959493  PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; Nhal_0953; phage(gi399498859)  4e-08  Click
8 959556..960779  PROPHAGE_Escher_CFT073: transposase; Nhal_0954; phage(gi26246249)  4e-122  Click
9 complement(960740..961045)  hypothetical protein; Nhal_0955  N/A  Click
10 961640..961715  tRNA  N/A  Click
11 961729..961804  tRNA  N/A  Click
12 complement(961875..962837)  PHAGE_Pseudo_F10: Integrase; Nhal_0956; phage(gi148912793)  8e-39  Click
13 complement(962821..963039)  hypothetical protein; Nhal_0957  N/A  Click
14 complement(963096..963917)  PHAGE_Burkho_BcepIL02: hypothetical protein BcepIL02_gp11; Nhal_0958; phage(gi238801627)  9e-38  Click
15 complement(963921..964265)  PHAGE_Burkho_BcepMigl: hypothetical protein; Nhal_0959; phage(gi431809867)  2e-17  Click
16 complement(964280..964486)  hypothetical protein; Nhal_0960  N/A  Click
17 complement(964483..964668)  hypothetical protein; Nhal_0961  N/A  Click
18 complement(964665..964973)  PHAGE_Entero_N4: gp12; Nhal_0962; phage(gi119952191)  4e-20  Click
19 complement(964987..965682)  PHAGE_Stenot_S1: putative primase; Nhal_0963; phage(gi213163899)  3e-77  Click
20 complement(965679..966296)  hypothetical protein; Nhal_0964  N/A  Click
21 complement(966293..966511)  hypothetical protein; Nhal_0965  N/A  Click
22 complement(966588..966983)  hypothetical protein; Nhal_0966  N/A  Click
23 complement(966980..967138)  hypothetical protein; Nhal_0967  N/A  Click
24 967434..967721  PHAGE_Burkho_phiE202: gp6, pANL56; Nhal_0968; phage(gi134288760)  1e-09  Click
25 967693..968019  PHAGE_Burkho_phiE202: gp7, pANL12; Nhal_0969; phage(gi134288781)  3e-08  Click
26 complement(968209..968442)  hypothetical protein; Nhal_0970  N/A  Click
27 complement(968426..969031)  PHAGE_Entero_mEp237: prophage repressor; Nhal_0971; phage(gi435439304)  1e-06  Click
28 969117..969335  PHAGE_Escher_HK639: cro; Nhal_0972; phage(gi356870651)  3e-06  Click
29 969332..969529  hypothetical protein; Nhal_0973  N/A  Click
30 969526..969798  hypothetical protein; Nhal_0974  N/A  Click
31 969848..969866  attR    CACCGGGACCGTTTGGGCC  N/A  Click
32 969908..970255  hypothetical protein; Nhal_0975  N/A  Click
33 970259..970426  hypothetical protein; Nhal_0976  N/A  Click
34 970429..970554  hypothetical protein; Nhal_0977  N/A  Click
35 970730..973162  PHAGE_Stenot_S1: putative primase; Nhal_0978; phage(gi213163899)  0.0  Click
36 973163..973402  hypothetical protein; Nhal_0979  N/A  Click
37 973484..973681  PHAGE_Salico_CGphi29: hypothetical protein; Nhal_0980; phage(gi472340214)  4e-10  Click
38 973725..974363  PHAGE_Stenot_S1: putative terminase small subunit; Nhal_0981; phage(gi213163901)  1e-16  Click
39 974370..975425  PHAGE_Aggreg_S1249: possible bacteriophage antirepressor; Nhal_0982; phage(gi273809598)  1e-23  Click
40 975534..976484  PHAGE_Entero_N15: gp30; Nhal_0983; phage(gi9630500)  2e-25  Click
41 976486..978444  PHAGE_Stenot_S1: putative terminase large subunit; Nhal_0984; phage(gi213163902)  0.0  Click
42 978453..978734  PHAGE_Shigel_EP23: hypothetical protein; Nhal_0985; phage(gi371496294)  1e-10  Click
43 978765..979052  PHAGE_Escher_D108: GemB; Nhal_0986; phage(gi281199660)  7e-05  Click
44 979342..979527  hypothetical protein; Nhal_0987  N/A  Click
45 979556..980101  PHAGE_Acinet_Bphi_B1251: hypothetical protein; Nhal_0988; phage(gi423262020)  8e-08  Click
46 980164..980523  hypothetical protein; Nhal_0989  N/A  Click
47 complement(980715..981590)  PHAGE_Synech_S_CAM1: Dam; Nhal_0990; phage(gi472339543)  1e-07  Click
48 complement(981615..983114)  PHAGE_Yersin_413C: hypothetical protein L-413Cp40; Nhal_0991; phage(gi30065744)  4e-12  Click
49 983402..984463  PHAGE_Salmon_vB_SosS_Oslo: putative antirepressor protein Ant; Nhal_0992; phage(gi399528777)  3e-08  Click
50 984553..984993  PHAGE_Ralsto_RSS0: hypothetical protein; Nhal_0993; phage(gi423262464)  9e-27  Click
51 985121..985405  PHAGE_Pseudo_F10: hypothetical protein PPF10_gp003; Nhal_0994; phage(gi148912768)  7e-11  Click
52 985405..985821  PHAGE_Aeromo_8t: baseplate hub subunit and tail lysozyme; Nhal_0995; phage(gi37651619)  2e-12  Click
53 985818..987296  PHAGE_Pseudo_F10: Putative portal protein; Nhal_0996; phage(gi148912769)  3e-109  Click
54 987302..989659  PHAGE_Stenot_S1: putative major head protein; Nhal_0997; phage(gi213163906)  3e-74  Click
55 989666..990079  PHAGE_Persic_P12024S: hypothetical protein; Nhal_0998; phage(gi399528433)  2e-12  Click
56 990085..990447  PHAGE_Stenot_S1: putative recombinase; Nhal_0999; phage(gi213163907)  3e-23  Click
57 990447..990752  hypothetical protein; Nhal_1000  N/A  Click
58 990745..991044  hypothetical protein; Nhal_1001  N/A  Click
59 991044..991655  PHAGE_Burkho_BcepNazgul: hypothetical protein Nazgul55; Nhal_1002; phage(gi91214209)  1e-06  Click
60 991652..992092  hypothetical protein; Nhal_1003  N/A  Click
61 992149..992310  hypothetical protein; Nhal_1004  N/A  Click
62 992383..993129  PHAGE_Loktan_pCB2051_A: hypothetical protein; Nhal_1005; phage(gi472341409)  1e-12  Click
63 993160..996453  PHAGE_Stenot_S1: putative tape measure protein; Nhal_1006; phage(gi213163916)  1e-34  Click
64 complement(996470..996802)  PHAGE_Burkho_phiE125: putative helix-turn-helix transcriptional regulator; Nhal_1007; phage(gi17975230)  8e-06  Click
65 complement(996786..997040)  PHAGE_Mycoba_Fruitloop: gp41; Nhal_1008; phage(gi206599921)  6e-07  Click
66 997110..997493  PHAGE_Stenot_S1: hypothetical protein StPS1_gp18; Nhal_1009; phage(gi213163917)  5e-16  Click
67 997494..1000835  PHAGE_Stenot_S1: putative tail protein b; Nhal_1010; phage(gi213163918)  4e-138  Click
68 1000832..1001926  hypothetical protein; Nhal_1011  N/A  Click
69 1001923..1002213  hypothetical protein; Nhal_1012  N/A  Click
70 1002210..1002599  PHAGE_Agroba_7_7_1: structural protein; Nhal_1013; phage(gi435844445)  1e-07  Click
71 1002603..1004579  PHAGE_Stenot_S1: putative tail protein c; Nhal_1014; phage(gi213163920)  1e-47  Click
72 1004576..1004803  PHAGE_Stenot_S1: hypothetical protein StPS1_gp22; Nhal_1015; phage(gi213163921)  2e-08  Click
73 complement(1004888..1005184)  hypothetical protein; Nhal_1016  N/A  Click
74 complement(1005207..1005716)  PHAGE_Stenot_S1: hypothetical protein StPS1_gp42; Nhal_1017; phage(gi213163941)  2e-08  Click
75 complement(1005821..1006843)  PHAGE_Salmon_vB_SosS_Oslo: putative antirepressor protein Ant; Nhal_1018; phage(gi399528777)  9e-49  Click
76 1015313..1015324  attR    TTATTATAATTC  N/A  Click