Definition Sideroxydans lithotrophicus ES-1 chromosome, complete genome.
Accession NC_013959
Length 3,003,656
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 69 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(203391..204752)  PHAGE_Mycoba_Myrna: gp183; Slit_0184; phage(gi203454746)  1e-08  Click
2 204810..205709  NAD-dependent epimerase/dehydratase; Slit_0185  N/A  Click
3 205886..206176  PHAGE_Bacill_36: GroES; Slit_0186; phage(gi156564025)  3e-13  Click
4 206210..207856  PHAGE_Halocy_JM_2012: chaperonin GroEL; Slit_0187; phage(gi389060206)  2e-61  Click
5 208213..208288  tRNA  N/A  Click
6 complement(208538..209266)  PHAGE_Pseudo_JBD30: hypothetical protein; Slit_0188; phage(gi448244585)  2e-16  Click
7 209475..209819  PHAGE_Haemop_SuMu: Mu-like prophage FluMu DNA-binding protein Ner; Slit_0189; phage(gi418489037)  4e-10  Click
8 209821..210264  PHAGE_Pseudo_JBD24: hypothetical protein; Slit_0190; phage(gi448245048)  3e-21  Click
9 210261..212375  PHAGE_Pseudo_D3112: A transposase; Slit_0191; phage(gi38229118)  9e-127  Click
10 212441..213187  PHAGE_Rhodob_RcapMu: transposition protein B; Slit_0192; phage(gi356870854)  4e-31  Click
11 213188..213775  PHAGE_Rhodob_RcapMu: TroR domain transcriptional regulator; Slit_0193; phage(gi356870855)  2e-20  Click
12 213772..214089  PHAGE_Pseudo_MP42: hypothetical protein; Slit_0194; phage(gi399528590)  5e-14  Click
13 214089..214376  hypothetical protein; Slit_0195  N/A  Click
14 214373..214654  hypothetical protein; Slit_0196  N/A  Click
15 214651..214896  hypothetical protein; Slit_0197  N/A  Click
16 214886..215398  hypothetical protein; Slit_0198  N/A  Click
17 215395..215931  PHAGE_Haemop_SuMu: hypothetical protein; Slit_0199; phage(gi418489048)  2e-05  Click
18 215949..216320  hypothetical protein; Slit_0200  N/A  Click
19 216352..216723  hypothetical protein; Slit_0201  N/A  Click
20 216749..217117  hypothetical protein; Slit_0202  N/A  Click
21 217114..218517  PHAGE_Bordet_1: reverse transcriptase; Slit_0203; phage(gi41179367)  2e-35  Click
22 218504..218821  hypothetical protein; Slit_0204  N/A  Click
23 218836..219357  hypothetical protein; Slit_0205  N/A  Click
24 219354..219473  hypothetical protein; Slit_0206  N/A  Click
25 219470..219802  hypothetical protein; Slit_0207  N/A  Click
26 219806..220198  PHAGE_Mycoba_Che9c: gp69; Slit_0208; phage(gi29566175)  7e-08  Click
27 220266..220547  PHAGE_Bacill_SPBc2: histone-like prokaryotic DNA-binding protein family; Slit_0209; phage(gi9630187)  1e-14  Click
28 220609..220803  hypothetical protein; Slit_0210  N/A  Click
29 220808..221239  hypothetical protein; Slit_0211  N/A  Click
30 221241..221675  PHAGE_Pseudo_JBD88a: hypothetical protein; Slit_0212; phage(gi448244704)  1e-13  Click
31 221672..222061  PHAGE_Burkho_KS10: hypothetical protein KS10_gp27; Slit_0213; phage(gi198449289)  1e-09  Click
32 222093..222452  hypothetical protein; Slit_0214  N/A  Click
33 222454..222786  hypothetical protein; Slit_0215  N/A  Click
34 223048..223335  PHAGE_Pseudo_B3: holin; Slit_0216; phage(gi56692592)  3e-15  Click
35 223335..223958  PHAGE_Burkho_BcepMu: gp22; Slit_0217; phage(gi48696932)  1e-66  Click
36 223949..224476  hypothetical protein; Slit_0218  N/A  Click
37 224473..224691  PHAGE_Entero_JS98: hypothetical protein EpJS98_gp095; Slit_0219; phage(gi161622434)  4e-06  Click
38 224692..225102  PHAGE_Pseudo_B3: hypothetical protein B3ORF28; Slit_0220; phage(gi56692596)  3e-05  Click
39 225099..225401  PHAGE_Escher_D108: hypothetical protein; Slit_0221; phage(gi281199669)  2e-07  Click
40 225388..225888  PHAGE_Pseudo_MP42: hypothetical protein; Slit_0222; phage(gi399528604)  1e-46  Click
41 225881..227500  PHAGE_Pseudo_D3112: hypothetical protein D3112p26; Slit_0223; phage(gi38229138)  0.0  Click
42 227494..229071  PHAGE_Pseudo_MP29: portal protein; Slit_0224; phage(gi215480002)  7e-155  Click
43 229058..229864  PHAGE_Pseudo_D3112: virion morphogenesis protein; Slit_0225; phage(gi38229140)  1e-66  Click
44 229864..230343  PHAGE_Pseudo_D3112: virion morphogenesis protein; Slit_0226; phage(gi38229141)  1e-18  Click
45 230590..231726  PHAGE_Pseudo_JBD30: hypothetical protein; Slit_0227; phage(gi448244621)  2e-63  Click
46 231749..232150  PHAGE_Pseudo_JBD5: hypothetical protein; Slit_0228; phage(gi448245024)  3e-36  Click
47 232177..233085  PHAGE_Pseudo_D3112: putative major head subunit protein; Slit_0229; phage(gi38229147)  3e-93  Click
48 233175..233603  PHAGE_Rhodov_RS1: hypothetical protein; Slit_0230; phage(gi472342917)  4e-09  Click
49 233603..233977  PHAGE_Entero_epsilon15: hypothetical protein epsilon15p50; Slit_0231; phage(gi117371479)  3e-36  Click
50 233974..234396  PHAGE_Haemop_SuMu: Mu-like prophage protein gp36; Slit_0232; phage(gi418489087)  1e-26  Click
51 234393..234995  PHAGE_Haemop_SuMu: Mu-like prophage protein gp37; Slit_0233; phage(gi418489088)  4e-13  Click
52 235004..235180  PHAGE_Haemop_SuMu: hypothetical protein; Slit_0234; phage(gi418489089)  1e-06  Click
53 235183..236601  PHAGE_Haemop_SuMu: tail sheath protein gpL; Slit_0235; phage(gi418489090)  2e-101  Click
54 236621..236995  PHAGE_Haemop_SuMu: tail tube protein; Slit_0236; phage(gi418489063)  9e-21  Click
55 236992..237309  hypothetical protein; Slit_0237  N/A  Click
56 237330..237494  hypothetical protein; Slit_0238  N/A  Click
57 237491..239404  PHAGE_Haemop_SuMu: bacteriophage tail length determination protein; Slit_0239; phage(gi418489066)  3e-112  Click
58 239459..240682  PHAGE_Haemop_SuMu: DNA circulation protein; Slit_0240; phage(gi418489067)  1e-27  Click
59 240666..241790  PHAGE_Haemop_SuMu: Mu-like prophage tail protein gpP; Slit_0241; phage(gi418489068)  1e-65  Click
60 241787..242350  PHAGE_Haemop_SuMu: phage-related baseplate assembly protein gp45; Slit_0242; phage(gi418489069)  3e-26  Click
61 242350..242721  PHAGE_Haemop_SuMu: Mu bacteriophage protein gp46; Slit_0243; phage(gi418489070)  1e-23  Click
62 242724..243782  PHAGE_Haemop_SuMu: baseplate J family protein gp47; Slit_0244; phage(gi418489071)  4e-45  Click
63 243779..244333  PHAGE_Haemop_SuMu: hypothetical protein; Slit_0245; phage(gi418489072)  3e-11  Click
64 244346..245671  PHAGE_Salmon_ST64B: tail protein; Slit_0246; phage(gi23505468)  1e-12  Click
65 245674..246201  PHAGE_Haemop_Aaphi23: putative tail fiber assembly protein; Slit_0247; phage(gi31544054)  1e-09  Click
66 246201..246659  hypothetical protein; Slit_0248  N/A  Click
67 246792..246977  PHAGE_Burkho_KS5: gp21; Slit_0249; phage(gi327198019)  1e-09  Click
68 246952..247740  PHAGE_Vibrio_VP882: DNA adenine methylase; Slit_0250; phage(gi126010878)  7e-109  Click
69 247882..248265  hypothetical protein; Slit_0251  N/A  Click
70 248435..250477  PHAGE_Pelagi_HTVC008M: adenylate/guanylyl cyclase; Slit_0252; phage(gi460042455)  9e-57  Click
Region 2, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1951060..1952406)  PHAGE_Bacill_SP10: portal protein; Slit_1921; phage(gi418489580)  2e-10  Click
2 complement(1952423..1953892)  PHAGE_Acinet_Bphi_B1251: hypothetical protein; Slit_1922; phage(gi423262000)  2e-71  Click
3 complement(1953852..1954328)  PHAGE_Cronob_ENT47670: hypothetical protein; Slit_1923; phage(gi431810521)  7e-36  Click
4 complement(1954361..1955101)  PHAGE_Pectob_ZF40: putative transposase; Slit_1924; phage(gi422936679)  1e-54  Click
5 complement(1955437..1955715)  hypothetical protein; Slit_1925  N/A  Click
6 complement(1955712..1956083)  hypothetical protein; Slit_1926  N/A  Click
7 complement(1956080..1956274)  hypothetical protein; Slit_1927  N/A  Click
8 complement(1956271..1956384)  hypothetical protein; Slit_1928  N/A  Click
9 complement(1956381..1956611)  hypothetical protein; Slit_1929  N/A  Click
10 complement(1956608..1957039)  PHAGE_Pseudo_AF: putative enoddeoxyribonuclease; Slit_1930; phage(gi431810354)  2e-32  Click
11 complement(1957036..1957302)  hypothetical protein; Slit_1931  N/A  Click
12 complement(1957299..1957517)  hypothetical protein; Slit_1932  N/A  Click
13 complement(1957514..1957771)  hypothetical protein; Slit_1933  N/A  Click
14 complement(1957768..1958307)  PHAGE_Escher_TL_2011c: hypothetical protein; Slit_1934; phage(gi418487093)  4e-17  Click
15 complement(1958304..1958954)  PHAGE_Vibrio_VvAW1: hypothetical protein; Slit_1935; phage(gi460042923)  1e-36  Click
16 complement(1958941..1959687)  PHAGE_Vibrio_VvAW1: hypothetical protein; Slit_1936; phage(gi460042921)  2e-34  Click
17 complement(1959690..1962221)  PHAGE_Pseudo_phi297: putative DNA methylase N-4/N-6 domain protein; Slit_1937; phage(gi374531254)  0.0  Click
18 complement(1962218..1962520)  hypothetical protein; Slit_1938  N/A  Click
19 complement(1962517..1962900)  hypothetical protein; Slit_1939  N/A  Click
20 complement(1963055..1963315)  PHAGE_Aggreg_S1249: phage protein; Slit_1940; phage(gi273809591)  4e-09  Click
21 1963423..1963731  PHAGE_Xylell_Xfas53: CI phage repressor; Slit_1941; phage(gi273810436)  7e-05  Click