Definition Pantoea ananatis LMG 20103 chromosome, complete genome.
Accession NC_013956
Length 4,703,373
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3275064..3275091  attL    ATGTATGCCAATAACGTATACCAATTCA  N/A  Click
2 3275108..3276307  PHAGE_Entero_P4: integrase; PANA_2912; phage(gi9627511)  1e-64  Click
3 3276318..3277760  hypothetical Protein; PANA_2913  N/A  Click
4 complement(3277960..3278145)  hypothetical Protein; PANA_2914  N/A  Click
5 complement(3278231..3278503)  PHAGE_Entero_PsP3: Pag; PANA_2915; phage(gi41057379)  6e-10  Click
6 3279053..3279319  PHAGE_Entero_P4: transcriptional regulator; PANA_2916; phage(gi9627517)  6e-23  Click
7 3279735..3279887  PHAGE_Entero_P4: putative CI repressor; PANA_2917; phage(gi9627516)  4e-11  Click
8 3279884..3280108  hypothetical Protein; PANA_2918  N/A  Click
9 3280105..3280428  PHAGE_Entero_P4: hypothetical protein P4p07; PANA_2919; phage(gi9627513)  9e-34  Click
10 3280440..3282764  PHAGE_Entero_P4: DNA primase; PANA_2920; phage(gi9627512)  0.0  Click
11 complement(3280455..3283082)  hypothetical Protein; PANA_2921  N/A  Click
12 3283258..3284136  hypothetical Protein; PANA_2922  N/A  Click
13 complement(3284366..3284593)  hypothetical Protein; PANA_2923  N/A  Click
14 complement(3284595..3285758)  PHAGE_Lister_vB_LmoM_AG20: putative tail lysin; PANA_2924; phage(gi472437346)  7e-05  Click
15 3300545..3300572  attR    ATGTATGCCAATAACGTATACCAATTCA  N/A  Click
Region 2, total : 51 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3503123..3503134  attL    TAAAAAAAAGTA  N/A  Click
2 3505185..3505197  attL    CAGAAAAGGAAGC  N/A  Click
3 complement(3512891..3514183)  PHAGE_Mycoba_ScottMcG: gp204; PANA_3128; phage(gi203459047)  3e-09  Click
4 complement(3514190..3515929)  PHAGE_Bacill_36: RecJ; PANA_3129; phage(gi156564062)  8e-65  Click
5 complement(3515933..3516724)  DsbC; PANA_3130  N/A  Click
6 complement(3516669..3517562)  PHAGE_Thermu_26: phage XerD-like integrase; PANA_3131; phage(gi157265417)  4e-14  Click
7 complement(3518104..3519204)  PHAGE_Entero_2: P2 gpD-like tail protein; PANA_3132; phage(gi169936019)  9e-156  Click
8 complement(3519204..3519686)  PHAGE_Entero_2: P2 gpU-like tail protein; PANA_3133; phage(gi169936020)  2e-61  Click
9 complement(3519683..3522478)  PHAGE_Entero_2: P2 gpT-like tail protein; PANA_3134; phage(gi169936021)  0.0  Click
10 complement(3522471..3522593)  PHAGE_Entero_2: P2 gpE-like protein; PANA_3135; phage(gi169936022)  6e-07  Click
11 complement(3522608..3522910)  PHAGE_Entero_2: P2 gpE-like tail protein; PANA_3136; phage(gi169936023)  1e-34  Click
12 complement(3522969..3523484)  PHAGE_Entero_2: P2 gpFII-like protein; PANA_3137; phage(gi169936024)  5e-81  Click
13 complement(3523497..3524669)  PHAGE_Entero_2: P2 gpFI-like protein; PANA_3138; phage(gi169936025)  0.0  Click
14 complement(3524787..3525389)  PHAGE_Entero_HK106: tail fiber assembly protein; PANA_3139; phage(gi428783304)  2e-40  Click
15 complement(3525389..3526732)  PHAGE_Entero_2: P2 gpH-like protein; PANA_3140; phage(gi169936030)  1e-94  Click
16 complement(3526729..3527337)  PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; PANA_3141; phage(gi169936031)  4e-85  Click
17 complement(3527337..3528251)  PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; PANA_3142; phage(gi169936032)  2e-104  Click
18 complement(3528238..3528594)  PHAGE_Entero_2: P2 gpW-like baseplate protein; PANA_3143; phage(gi169936033)  4e-35  Click
19 complement(3528591..3529247)  PHAGE_Entero_2: P2 gpV-like protein; PANA_3144; phage(gi169936034)  8e-73  Click
20 3529267..3530181  hypothetical Protein; PANA_3145  N/A  Click
21 complement(3530184..3530630)  PHAGE_Entero_2: P2 gpS-like tail completion protein; PANA_3146; phage(gi169936035)  3e-45  Click
22 complement(3530623..3530871)  PHAGE_Entero_2: P2 gpR-like tail completion protein; PANA_3147; phage(gi169936036)  3e-20  Click
23 complement(3531029..3531151)  PHAGE_Entero_2: P2 LysC-like protein; PANA_3148; phage(gi169936037)  3e-11  Click
24 complement(3531159..3531611)  PHAGE_Entero_2: P2 LysB-like protein; PANA_3149; phage(gi169936038)  5e-36  Click
25 3531162..3531650  hypothetical Protein; PANA_3150  N/A  Click
26 complement(3531587..3532102)  PHAGE_Entero_2: endolysin; PANA_3151; phage(gi169936041)  2e-71  Click
27 complement(3532083..3532295)  PHAGE_Entero_2: lysis protein; PANA_3152; phage(gi169936042)  7e-19  Click
28 complement(3532299..3532502)  PHAGE_Entero_2: P2 gpX-like tail protein; PANA_3153; phage(gi169936043)  4e-29  Click
29 complement(3532502..3532987)  PHAGE_Entero_2: P2 gpL-like protein; PANA_3154; phage(gi169936044)  6e-56  Click
30 complement(3533085..3533729)  PHAGE_Entero_2: P2 gpM-like protein; PANA_3155; phage(gi169936045)  2e-87  Click
31 complement(3533733..3534953)  PHAGE_Entero_2: P2 gpN-like major capsid protein; PANA_3156; phage(gi169936046)  5e-137  Click
32 complement(3534953..3535915)  PHAGE_Entero_2: P2 gpO-like protein; PANA_3157; phage(gi169936047)  2e-89  Click
33 3535926..3535938  attR    CAGAAAAGGAAGC  N/A  Click
34 3535961..3537727  PHAGE_Entero_2: P2 gpP-like protein; PANA_3158; phage(gi169936048)  0.0  Click
35 3537727..3538776  PHAGE_Entero_2: P2 gpQ-like protein; PANA_3159; phage(gi169936049)  7e-164  Click
36 complement(3538814..3539113)  hypothetical Protein; PANA_3160  N/A  Click
37 complement(3539107..3539574)  hypothetical Protein; PANA_3161  N/A  Click
38 3540099..3541217  PHAGE_Yersin_413C: hypothetical protein L-413Cp40; PANA_3162; phage(gi30065744)  1e-128  Click
39 3541201..3542196  hypothetical Protein; PANA_3163  N/A  Click
40 complement(3542197..3543138)  PHAGE_Thermu_26: C5 cytosine-specific DNA methylase; PANA_3164; phage(gi157265426)  7e-34  Click
41 complement(3543352..3543468)  PHAGE_Entero_PsP3: TumB; PANA_3165; phage(gi41057390)  2e-06  Click
42 complement(3543586..3543774)  PHAGE_Entero_2: hypothetical protein STM2728.Fels2; PANA_3166; phage(gi169936053)  9e-21  Click
43 complement(3543858..3546152)  PHAGE_Erwini_ENT90: replication protein A; PANA_3167; phage(gi431810936)  0.0  Click
44 complement(3546143..3547147)  PHAGE_Stenot_S1: putative PAPS; PANA_3168; phage(gi213163929)  4e-65  Click
45 complement(3547144..3547938)  PHAGE_Entero_2: DNA adenine methylase-like protein; PANA_3169; phage(gi169936055)  1e-80  Click
46 complement(3547977..3548204)  PHAGE_Entero_2: P2 gpOrf82-like protein; PANA_3170; phage(gi169936056)  1e-19  Click
47 complement(3548204..3548431)  PHAGE_Entero_2: hypothetical protein STM2732.Fels2; PANA_3171; phage(gi169936057)  2e-06  Click
48 3548301..3548708  hypothetical Protein; PANA_3172  N/A  Click
49 complement(3548501..3548884)  PHAGE_Erwini_ENT90: hypothetical protein; PANA_3173; phage(gi431810971)  5e-44  Click
50 complement(3548886..3549065)  PHAGE_Entero_2: hypothetical protein STM2735.Fels2; PANA_3174; phage(gi169936060)  5e-06  Click
51 complement(3549076..3549585)  PHAGE_Entero_2: bacteriophage regulatory protein CII; PANA_3175; phage(gi169936061)  4e-59  Click
52 complement(3549613..3549897)  PHAGE_Pasteu_F108: Cox; PANA_3176; phage(gi109302900)  1e-05  Click
53 3550325..3550597  PHAGE_Entero_2: P2 CI-like protein; PANA_3177; phage(gi169936063)  5e-06  Click
54 3550600..3551646  PHAGE_Entero_2: P2 Int-like protein; PANA_3178; phage(gi169936064)  4e-95  Click
55 3562937..3562948  attR    TAAAAAAAAGTA  N/A  Click
Region 3, total : 31 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3785959..3785973  attL    GATTGCCCCGGACAG  N/A  Click
2 3786312..3786986  PHAGE_Erwini_ENT90: phage integrase family protein; PANA_3392; phage(gi431810942)  8e-71  Click
3 3787069..3787689  hypothetical Protein; PANA_3393  N/A  Click
4 3788175..3788552  hypothetical Protein; PANA_3394  N/A  Click
5 complement(3788867..3789109)  PHAGE_Entero_PsP3: Pag; PANA_3395; phage(gi41057379)  3e-19  Click
6 complement(3789162..3790334)  PHAGE_Entero_PsP3: gp26; PANA_3396; phage(gi41057378)  6e-84  Click
7 complement(3790321..3790824)  PHAGE_Entero_PsP3: gp25; PANA_3397; phage(gi41057377)  6e-44  Click
8 complement(3790831..3793077)  PHAGE_Entero_PsP3: gp24; PANA_3398; phage(gi41057376)  1e-136  Click
9 complement(3793070..3793192)  PHAGE_Entero_PsP3: gp23.5; PANA_3399; phage(gi41057394)  3e-07  Click
10 3793166..3793438  PHAGE_Erwini_ENT90: hypothetical protein; PANA_3400; phage(gi431810976)  3e-07  Click
11 complement(3793225..3793521)  PHAGE_Erwini_ENT90: hypothetical protein; PANA_3401; phage(gi431810978)  6e-31  Click
12 complement(3793576..3794088)  PHAGE_Entero_PsP3: gp22; PANA_3402; phage(gi41057374)  3e-57  Click
13 complement(3794101..3795279)  PHAGE_Entero_PsP3: gp21; PANA_3403; phage(gi41057373)  1e-174  Click
14 complement(3795372..3795605)  hypothetical Protein; PANA_3404  N/A  Click
15 complement(3795963..3796502)  PHAGE_Entero_PsP3: gp20; PANA_3405; phage(gi41057372)  7e-34  Click
16 complement(3796499..3798337)  PHAGE_Erwini_ENT90: phage tail collar domain protein; PANA_3406; phage(gi431810938)  6e-81  Click
17 complement(3798407..3798940)  PHAGE_Entero_PsP3: gp18; PANA_3407; phage(gi41057370)  2e-59  Click
18 complement(3798933..3799841)  PHAGE_Entero_PsP3: gp17; PANA_3408; phage(gi41057369)  2e-121  Click
19 complement(3799845..3800195)  PHAGE_Entero_PsP3: gp16; PANA_3409; phage(gi41057368)  1e-34  Click
20 complement(3800192..3800776)  PHAGE_Entero_PsP3: gp15; PANA_3410; phage(gi41057367)  2e-55  Click
21 3800765..3801250  hypothetical Protein; PANA_3411  N/A  Click
22 complement(3800869..3801339)  PHAGE_Entero_PsP3: gp13; PANA_3412; phage(gi41057365)  3e-38  Click
23 complement(3801426..3801881)  PHAGE_Erwini_ENT90: control of lysis protein; PANA_3413; phage(gi431810965)  1e-43  Click
24 complement(3801857..3802366)  PHAGE_Salmon_RE_2010: lysozyme; PANA_3414; phage(gi418489704)  3e-59  Click
25 complement(3802350..3802589)  PHAGE_Erwini_ENT90: hypothetical protein; PANA_3415; phage(gi431810988)  1e-32  Click
26 complement(3802580..3803050)  PHAGE_Salmon_RE_2010: tail component protein; PANA_3416; phage(gi418489702)  7e-18  Click
27 complement(3803476..3803700)  PHAGE_Erwini_ENT90: putative prophage protein; PANA_3417; phage(gi431810986)  2e-17  Click
28 complement(3803908..3805971)  PHAGE_Entero_PsP3: gp36; PANA_3418; phage(gi41057388)  0.0  Click
29 complement(3805968..3806195)  PHAGE_Entero_PsP3: gp34; PANA_3419; phage(gi41057386)  1e-14  Click
30 complement(3806195..3806440)  PHAGE_Entero_PsP3: gp33; PANA_3420; phage(gi41057385)  2e-09  Click
31 complement(3806480..3806899)  PHAGE_Erwini_ENT90: hypothetical protein; PANA_3421; phage(gi431810971)  6e-40  Click
32 3807004..3807018  attR    GATTGCCCCGGACAG  N/A  Click
33 3807260..3807856  PHAGE_Entero_PsP3: CI; PANA_3422; phage(gi41057393)  2e-25  Click