Definition Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome.
Accession NC_013891
Length 2,797,636
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 50 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1623449..1623460  attL    CCAATTTTTCTC  N/A  Click
2 1624439..1624451  attL    GTTATTGCGATTT  N/A  Click
3 complement(1632782..1634647)  PHAGE_Megavi_chiliensis: glutamine-dependent asparagine synthetase; lse_1585; phage(gi363540450)  7e-30  Click
4 complement(1634783..1635982)  hypothetical protein; lse_1586  N/A  Click
5 complement(1636212..1636322)  hypothetical protein; lse_1587  N/A  Click
6 1636647..1636931  hypothetical protein; lse_1588  N/A  Click
7 1636950..1637189  PHAGE_Lister_B054: gp34; lse_1589; phage(gi157325318)  4e-11  Click
8 complement(1637226..1638056)  PHAGE_Lister_B054: PlyB054; lse_1590; phage(gi157325317)  4e-89  Click
9 complement(1638053..1638331)  PHAGE_Lister_A118: holin; lse_1591; phage(gi16798807)  1e-24  Click
10 complement(1638353..1638739)  hypothetical protein; lse_1592  N/A  Click
11 complement(1638758..1638916)  PHAGE_Staphy_IPLA88: hypothetical protein SauSIPLA88_gp56; lse_1593; phage(gi215401226)  6e-07  Click
12 complement(1638909..1639196)  PHAGE_Staphy_IPLA88: hypothetical protein SauSIPLA88_gp55; lse_1594; phage(gi215401225)  1e-05  Click
13 complement(1639215..1639694)  PHAGE_Brocho_A9: gp49; lse_1595; phage(gi327197839)  1e-05  Click
14 complement(1639694..1640074)  hypothetical protein; lse_1596  N/A  Click
15 complement(1640067..1640684)  hypothetical protein; lse_1597  N/A  Click
16 complement(1640699..1642132)  PHAGE_Clostr_phi8074_B1: putative phage tail protein; lse_1598; phage(gi431810378)  5e-35  Click
17 complement(1642133..1642837)  PHAGE_Strept_5093: hypothetical protein st5093phage_28; lse_1599; phage(gi238801908)  4e-17  Click
18 complement(1642837..1645422)  PHAGE_Clostr_phiCD38_2: tail tape measure; lse_1600; phage(gi333798123)  2e-52  Click
19 complement(1645424..1645666)  hypothetical protein; lse_1601  N/A  Click
20 complement(1645741..1646025)  hypothetical protein; lse_1602  N/A  Click
21 complement(1646027..1646605)  hypothetical protein; lse_1603  N/A  Click
22 complement(1646602..1646985)  hypothetical protein; lse_1604  N/A  Click
23 complement(1646988..1647398)  PHAGE_Staphy_SpaA1: phage protein, HK97 gp10; lse_1605; phage(gi399498874)  1e-14  Click
24 complement(1647400..1647726)  hypothetical protein; lse_1606  N/A  Click
25 complement(1647730..1648047)  PHAGE_Brocho_BL3: gp10; lse_1607; phage(gi327409400)  4e-08  Click
26 complement(1648052..1648876)  PHAGE_Bacill_BMBtp2: hypothetical protein; lse_1608; phage(gi431809509)  2e-60  Click
27 complement(1648897..1649481)  PHAGE_Strept_O1205: hypothetical protein O1205p29; lse_1609; phage(gi23455876)  4e-10  Click
28 complement(1649590..1650354)  PHAGE_Clostr_CD119: putative head protein; lse_1610; phage(gi90592642)  1e-26  Click
29 complement(1650344..1651735)  PHAGE_Bacill_BMBtp2: phage portal protein; lse_1611; phage(gi431809505)  9e-80  Click
30 complement(1651735..1653027)  PHAGE_Deep_s_D6E: large subunit terminase; lse_1612; phage(gi423262329)  4e-177  Click
31 complement(1653017..1653769)  PHAGE_Lister_A006: TerS; lse_1613; phage(gi157325423)  1e-35  Click
32 complement(1654098..1654460)  hypothetical protein; lse_1614  N/A  Click
33 complement(1654453..1654647)  hypothetical protein; lse_1615  N/A  Click
34 complement(1654637..1654894)  hypothetical protein; lse_1616  N/A  Click
35 complement(1655082..1655786)  PHAGE_Strept_Dp_1: hypothetical protein; lse_1617; phage(gi327198348)  1e-14  Click
36 complement(1655799..1656341)  PHAGE_Bacill_BtCS33: integrase; lse_1618; phage(gi392972759)  7e-42  Click
37 complement(1656334..1656852)  PHAGE_Staphy_SpaA1: sigma70, RNA polymerase sigma factor, positive control factor Xpf (C-terminal region); lse_1619; phage(gi399498918)  9e-06  Click
38 complement(1656872..1657273)  hypothetical protein; lse_1620  N/A  Click
39 complement(1657270..1657623)  hypothetical protein; lse_1621  N/A  Click
40 complement(1657616..1658284)  PHAGE_Deep_s_D6E: hypothetical protein; lse_1622; phage(gi423262369)  5e-25  Click
41 complement(1658289..1659212)  PHAGE_Staphy_55: ORF014; lse_1623; phage(gi66396127)  1e-13  Click
42 complement(1659221..1659925)  PHAGE_Burkho_phiE125: hypothetical protein phiE125p43; lse_1624; phage(gi17975204)  5e-22  Click
43 complement(1660024..1660209)  hypothetical protein; lse_1625  N/A  Click
44 complement(1660202..1660303)  hypothetical protein; lse_1626  N/A  Click
45 1660381..1660545  PHAGE_Entero_P22: hypothetical protein P22gp16; lse_1627; phage(gi9635553)  6e-05  Click
46 complement(1660691..1661029)  hypothetical protein; lse_1628  N/A  Click
47 complement(1661035..1661280)  PHAGE_Clostr_phi3626: putative Cro-like protein; lse_1629; phage(gi20065988)  4e-08  Click
48 1661370..1661382  attR    GTTATTGCGATTT  N/A  Click
49 1661448..1661795  PHAGE_Clostr_phi3626: putative CI-like transcriptional repressor; lse_1630; phage(gi20065987)  4e-18  Click
50 1661804..1663024  PHAGE_Lactob_Lrm1: integrase; lse_1631; phage(gi195661224)  2e-30  Click
51 complement(1663124..1663228)  hypothetical protein; lse_1632  N/A  Click
52 1663251..1663550  hypothetical protein; lse_1633  N/A  Click
53 complement(1663596..1668764)  PHAGE_Achole_L2: envelope protein; lse_1634; phage(gi9626524)  5e-13  Click
54 1670024..1670035  attR    CCAATTTTTCTC  N/A  Click