Definition Klebsiella variicola At-22 chromosome, complete genome.
Accession NC_013850
Length 5,458,505
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 75 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1888339..1890399  PROPHAGE_Escher_MG1655: protease II; Kvar_1748; phage(gi16129798)  0.0  Click
2 complement(1890403..1891062)  PHAGE_Cronob_vB_CsaM_GAP32: putative DNA polymerase III epsilon subunit; Kvar_1749; phage(gi414087193)  4e-17  Click
3 complement(1891141..1891371)  PHAGE_Pectob_ZF40: putative DNA polymerase; Kvar_1750; phage(gi422936677)  5e-16  Click
4 1891485..1891859  copper resistance protein CopC; Kvar_1751  N/A  Click
5 1891863..1892732  copper resistance D domain protein; Kvar_1752  N/A  Click
6 1892749..1893087  PHAGE_Entero_PsP3: gp28; Kvar_1753; phage(gi41057381)  4e-08  Click
7 1893322..1893349  attL    ACAGGAATCGTATTCGGTCTCTTTTTAT  N/A  Click
8 complement(1893425..1894510)  PHAGE_Entero_mEp235: integrase; Kvar_1754; phage(gi428781836)  4e-73  Click
9 complement(1894479..1894751)  PHAGE_Entero_HK629: excisionase; Kvar_1755; phage(gi428782042)  2e-08  Click
10 complement(1894927..1895124)  PHAGE_Escher_HK639: DNA pol III theta; Kvar_1756; phage(gi356870660)  1e-24  Click
11 complement(1895735..1896007)  PHAGE_Entero_HK446: hypothetical protein; Kvar_1758; phage(gi428782222)  4e-25  Click
12 complement(1896004..1896303)  PHAGE_Entero_mEpX1: hypothetical protein; Kvar_1759; phage(gi428781904)  9e-24  Click
13 complement(1896314..1896796)  PHAGE_Entero_HK140: hypothetical protein; Kvar_1760; phage(gi428781979)  5e-64  Click
14 complement(1896789..1897682)  PHAGE_Entero_HK140: DNA single-strand annealing protein; Kvar_1761; phage(gi428781980)  9e-143  Click
15 complement(1897679..1897987)  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1762; phage(gi431810539)  1e-12  Click
16 complement(1898115..1898396)  PHAGE_Salmon_SE1: hypothetical protein SE1_gp19; Kvar_1763; phage(gi219681210)  2e-26  Click
17 complement(1898383..1898673)  PHAGE_Escher_HK75: kil protein; Kvar_1764; phage(gi356870711)  7e-08  Click
18 complement(1898703..1899248)  hypothetical protein; Kvar_1765  N/A  Click
19 complement(1899295..1899618)  PHAGE_Entero_lambda: early gene regulator; Kvar_1766; phage(gi9626289)  5e-45  Click
20 complement(1899965..1900627)  PHAGE_Entero_ST64T: C2; Kvar_1767; phage(gi24371557)  1e-72  Click
21 1900731..1900940  PHAGE_Salmon_vB_SosS_Oslo: Cro repressor protein; Kvar_1768; phage(gi399528814)  1e-15  Click
22 1901061..1901360  PHAGE_Entero_lambda: cII protein; Kvar_1769; phage(gi9626294)  3e-31  Click
23 1901395..1901556  PHAGE_Escher_HK75: hypothetical protein; Kvar_1770; phage(gi356870717)  1e-22  Click
24 1901543..1902436  PHAGE_Entero_HK633: DNA replication protein O; Kvar_1771; phage(gi428782571)  7e-119  Click
25 1902426..1903859  PHAGE_Entero_Sf6: gene 44 protein; Kvar_1772; phage(gi41057321)  0.0  Click
26 1903859..1904455  hypothetical protein; Kvar_1773  N/A  Click
27 1904583..1904972  PHAGE_Entero_P22: EaE; Kvar_1774; phage(gi9635501)  5e-12  Click
28 1904969..1905238  hypothetical protein; Kvar_1775  N/A  Click
29 1905235..1905900  PHAGE_Entero_epsilon15: Ead-like protein; Kvar_1776; phage(gi30387424)  1e-27  Click
30 1905900..1906190  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip089; Kvar_1777; phage(gi20065884)  5e-44  Click
31 1906187..1907083  PHAGE_Salmon_c341: hypothetical protein; Kvar_1778; phage(gi255252703)  3e-13  Click
32 1907076..1907315  PHAGE_Escher_HK639: hypothetical protein; Kvar_1779; phage(gi356870632)  7e-14  Click
33 1907361..1907783  PHAGE_Cronob_phiES15: hypothetical protein; Kvar_1780; phage(gi401817579)  2e-16  Click
34 1907780..1907962  PHAGE_Entero_ST64T: NinD; Kvar_1781; phage(gi24371567)  1e-22  Click
35 1907920..1908099  PHAGE_Entero_mEpX1: NinE protein; Kvar_1782; phage(gi428781923)  4e-16  Click
36 1908092..1908277  PHAGE_Salmon_vB_SemP_Emek: NinF; Kvar_1783; phage(gi399498849)  6e-17  Click
37 1908261..1908551  PHAGE_Entero_HK140: hypothetical protein; Kvar_1784; phage(gi428781999)  5e-46  Click
38 1908548..1908943  PHAGE_Cronob_ENT47670: endodeoxyribonuclease RUS; Kvar_1785; phage(gi431810529)  4e-63  Click
39 1908940..1909137  PHAGE_Salmon_vB_SosS_Oslo: NinH protein; Kvar_1786; phage(gi399528830)  1e-18  Click
40 1909125..1909307  PHAGE_Salmon_epsilon34: NinZ; Kvar_1787; phage(gi221328679)  4e-06  Click
41 1909304..1909915  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1788; phage(gi431810516)  5e-109  Click
42 1910261..1910336  tRNA  N/A  Click
43 1910530..1910844  PHAGE_Salmon_SPN3UB: hypothetical protein; Kvar_1789; phage(gi423262443)  4e-47  Click
44 1910847..1911350  PHAGE_Entero_cdtI: lysin; Kvar_1790; phage(gi148609440)  8e-76  Click
45 1911451..1911828  PHAGE_Entero_SfV: putative Rz lytic protein; Kvar_1791; phage(gi19549038)  7e-18  Click
46 1912363..1912965  PHAGE_Escher_HK639: terminase small subunit; Kvar_1793; phage(gi356870601)  1e-79  Click
47 1912965..1914437  PHAGE_Cronob_phiES15: terminase large subunit; Kvar_1794; phage(gi401817592)  0.0  Click
48 1914450..1915919  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1795; phage(gi431810500)  4e-152  Click
49 1915951..1916853  PHAGE_Cronob_ENT47670: phage head morphogenesis; Kvar_1796; phage(gi431810507)  1e-115  Click
50 1916878..1917201  hypothetical protein; Kvar_1797  N/A  Click
51 1917274..1918455  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1798; phage(gi431810499)  3e-89  Click
52 1918459..1918890  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1799; phage(gi431810525)  7e-44  Click
53 1918902..1919999  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1800; phage(gi431810503)  7e-153  Click
54 1920009..1920275  hypothetical protein; Kvar_1801  N/A  Click
55 1920278..1920658  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1802; phage(gi431810531)  1e-32  Click
56 1920658..1920831  PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; Kvar_1803; phage(gi399528768)  2e-14  Click
57 1920831..1921178  PHAGE_Salmon_E1: hypothetical protein VIP0025; Kvar_1804; phage(gi170676301)  1e-22  Click
58 1921181..1921621  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1805; phage(gi431810532)  1e-33  Click
59 1921618..1922007  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1806; phage(gi431810530)  3e-36  Click
60 1922076..1922828  PHAGE_Cronob_ENT47670: major tail subunit; Kvar_1807; phage(gi431810520)  1e-36  Click
61 1922879..1923643  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1808; phage(gi431810508)  4e-64  Click
62 1923859..1924389  PHAGE_Salmon_SE1: hypothetical protein SE1_gp47; Kvar_1809; phage(gi219681238)  3e-80  Click
63 complement(1924415..1924984)  hypothetical protein; Kvar_1810  N/A  Click
64 complement(1924974..1925261)  hypothetical protein; Kvar_1811  N/A  Click
65 1925482..1926060  hypothetical protein; Kvar_1812  N/A  Click
66 1926096..1926425  hypothetical protein; Kvar_1813  N/A  Click
67 1926468..1929071  PHAGE_Salmon_vB_SosS_Oslo: tail length tape-measure protein; Kvar_1814; phage(gi399528779)  3e-143  Click
68 1929071..1929616  PHAGE_Burkho_KS9: hypothetical protein gp48; Kvar_1815; phage(gi255033731)  3e-13  Click
69 1929658..1930134  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1816; phage(gi431810519)  2e-43  Click
70 1930134..1930604  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1817; phage(gi431810518)  2e-27  Click
71 1930601..1930996  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1818; phage(gi431810526)  3e-36  Click
72 1930983..1933460  PHAGE_Cronob_ENT47670: putative tail protein; Kvar_1819; phage(gi431810495)  0.0  Click
73 1933545..1935653  PHAGE_Cronob_ENT47670: hypothetical protein; Kvar_1820; phage(gi431810496)  2e-06  Click
74 1935655..1936458  hypothetical protein; Kvar_1821  N/A  Click
75 1936566..1936856  PHAGE_Entero_mEp390: hypothetical protein; Kvar_1822; phage(gi428782690)  2e-12  Click
76 1936856..1938121  PHAGE_Salmon_vB_SosS_Oslo: error-prone lesion bypass DNA polymerase V; Kvar_1823; phage(gi399528790)  0.0  Click
77 complement(1938114..1938785)  PHAGE_Pseudo_F116: hypothetical protein F116p67; Kvar_1824; phage(gi56692976)  6e-45  Click
78 1939176..1939203  attR    ACAGGAATCGTATTCGGTCTCTTTTTAT  N/A  Click
Region 2, total : 46 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2184111..2184123  attL    CTGCCTGGCAATC  N/A  Click
2 complement(2184415..2185662)  PHAGE_Entero_phiP27: putative integrase; Kvar_2050; phage(gi18249865)  2e-82  Click
3 complement(2185662..2185877)  hypothetical protein; Kvar_2051  N/A  Click
4 complement(2185942..2186181)  PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; Kvar_2052; phage(gi169257270)  2e-24  Click
5 complement(2186189..2186497)  PHAGE_Cronob_phiES15: hypothetical protein; Kvar_2053; phage(gi401817569)  4e-26  Click
6 complement(2186494..2187204)  PHAGE_Entero_P1: PmgT; Kvar_2054; phage(gi46401715)  2e-74  Click
7 complement(2187197..2187550)  hypothetical protein; Kvar_2055  N/A  Click
8 complement(2187585..2188694)  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; Kvar_2056; phage(gi169257271)  0.0  Click
9 complement(2188707..2191805)  PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; Kvar_2057; phage(gi169257272)  0.0  Click
10 complement(2191943..2192098)  PHAGE_Gifsy_2: hypothetical protein STM1010.1n.Gifsy2; Kvar_2058; phage(gi169257274)  7e-16  Click
11 complement(2192107..2192301)  hypothetical protein; Kvar_2059  N/A  Click
12 complement(2192298..2192441)  hypothetical protein; Kvar_2060  N/A  Click
13 complement(2192441..2192536)  hypothetical protein; Kvar_2061  N/A  Click
14 complement(2192627..2192935)  PHAGE_Escher_HK639: hypothetical protein; Kvar_2062; phage(gi356870645)  3e-27  Click
15 complement(2193322..2193744)  PHAGE_Entero_4795: hypothetical protein PBV4795_ORF20; Kvar_2063; phage(gi157166005)  4e-26  Click
16 complement(2193769..2194347)  PHAGE_Entero_4795: hypothetical protein PBV4795_ORF21; Kvar_2064; phage(gi157166006)  7e-48  Click
17 complement(2194350..2194634)  PHAGE_Entero_4795: hypothetical protein PBV4795_ORF22; Kvar_2065; phage(gi157166007)  7e-37  Click
18 complement(2194720..2195103)  PHAGE_Entero_mEp237: prophage repressor; Kvar_2066; phage(gi435439304)  4e-52  Click
19 2195201..2195431  PHAGE_Gifsy_2: putative bacteriophage regulatory protein; Lambda gpCro analog; Kvar_2067; phage(gi169257277)  5e-11  Click
20 2195422..2195958  PHAGE_Entero_mEp237: CII protein; Kvar_2068; phage(gi435439306)  2e-67  Click
21 2195958..2196050  hypothetical protein; Kvar_2069  N/A  Click
22 2196087..2196881  PHAGE_Burkho_KS9: chromosome partitioning protein gp35; Kvar_2070; phage(gi255033718)  6e-69  Click
23 2196947..2197786  PHAGE_Burkho_DC1: replication protein; Kvar_2071; phage(gi401723032)  4e-25  Click
24 2197789..2198538  PHAGE_Gifsy_2: bacteriophage DNA replication protein; Kvar_2072; phage(gi169257280)  1e-119  Click
25 2198546..2198890  PHAGE_Gifsy_2: hypothetical protein STM1016.Gifsy2; Kvar_2073; phage(gi169257281)  4e-13  Click
26 2198874..2199458  hypothetical protein; Kvar_2074  N/A  Click
27 2199455..2199937  PHAGE_Pectob_ZF40: putative methylase; Kvar_2075; phage(gi422936660)  9e-68  Click
28 2199934..2200158  hypothetical protein; Kvar_2076  N/A  Click
29 2200151..2200768  PHAGE_Salmon_SPN3UB: hypothetical protein; Kvar_2077; phage(gi423262430)  6e-08  Click
30 2200768..2201106  hypothetical protein; Kvar_2078  N/A  Click
31 2201103..2201702  PHAGE_Entero_HK022: hypothetical protein HK022p33; Kvar_2079; phage(gi19343382)  4e-21  Click
32 2201706..2202098  PHAGE_Entero_ST64T: Orf-101; Kvar_2080; phage(gi24371571)  9e-13  Click
33 2202206..2202490  hypothetical protein; Kvar_2081  N/A  Click
34 2202516..2203415  hypothetical protein; Kvar_2082  N/A  Click
35 2203693..2204331  hypothetical protein; Kvar_2083  N/A  Click
36 2205242..2205463  PHAGE_Entero_mEp237: hypothetical protein; Kvar_2085; phage(gi435439314)  1e-16  Click
37 2205511..2206107  PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; Kvar_2086; phage(gi169257286)  2e-85  Click
38 2206113..2206313  PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; Kvar_2087; phage(gi169257287)  1e-17  Click
39 2206310..2206612  PHAGE_Erwini_phiEt88: hypothetical protein; Kvar_2088; phage(gi327198620)  3e-36  Click
40 2206609..2207424  PHAGE_Gifsy_2: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; Kvar_2089; phage(gi169257290)  6e-42  Click
41 2207677..2208303  hypothetical protein; Kvar_2090  N/A  Click
42 2208882..2209277  PHAGE_Entero_mEp390: putative holin; Kvar_2091; phage(gi428782712)  9e-45  Click
43 2209264..2209545  PHAGE_Entero_mEp390: putative holin; Kvar_2092; phage(gi428782713)  6e-36  Click
44 2209545..2210171  PHAGE_Cronob_ENT39118: endolysin; Kvar_2093; phage(gi431811063)  8e-91  Click
45 2210179..2210355  hypothetical protein; Kvar_2094  N/A  Click
46 complement(2210377..2210559)  hypothetical protein; Kvar_2095  N/A  Click
47 2210645..2210938  PHAGE_Escher_HK639: hypothetical protein; Kvar_2096; phage(gi356870672)  7e-35  Click
48 2210854..2210866  attR    CTGCCTGGCAATC  N/A  Click
Region 3, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2213689..2213934  PHAGE_Salmon_ST160: hypothetical protein; Kvar_2099; phage(gi318065946)  3e-08  Click
2 2214492..2215496  PHAGE_Burkho_BcepMigl: terminase small subunit; Kvar_2100; phage(gi431809885)  1e-46  Click
3 2215474..2216778  PHAGE_Pseudo_H105/1: phage terminase large subunit; Kvar_2101; phage(gi327198525)  1e-107  Click
4 2216783..2218207  PHAGE_Escher_HK639: hypothetical protein; Kvar_2102; phage(gi356870603)  0.0  Click
5 2218278..2219303  PHAGE_Escher_HK639: hypothetical protein; Kvar_2103; phage(gi356870604)  2e-98  Click
6 2219410..2220174  PHAGE_Escher_HK639: hypothetical protein; Kvar_2104; phage(gi356870605)  3e-97  Click
7 2220262..2221398  PHAGE_Escher_HK639: hypothetical protein; Kvar_2105; phage(gi356870606)  2e-165  Click
8 2221438..2221650  PHAGE_Escher_HK639: hypothetical protein; Kvar_2106; phage(gi356870607)  1e-11  Click
9 2221654..2222064  hypothetical protein; Kvar_2107  N/A  Click
10 2222066..2222362  hypothetical protein; Kvar_2108  N/A  Click
11 2222334..2222717  PHAGE_Acinet_Bphi_B1251: hypothetical protein; Kvar_2109; phage(gi423262010)  3e-16  Click
12 2222719..2223270  PHAGE_Escher_HK639: hypothetical protein; Kvar_2110; phage(gi356870610)  3e-30  Click
13 2223267..2223659  PHAGE_Acinet_Bphi_B1251: hypothetical protein; Kvar_2111; phage(gi423262013)  4e-15  Click
14 2223683..2224855  PHAGE_Serrat_phiMAM1: putative phage tail fiber; Kvar_2112; phage(gi440789465)  9e-11  Click
15 2224909..2225391  hypothetical protein; Kvar_2113  N/A  Click
16 2225529..2225726  hypothetical protein; Kvar_2114  N/A  Click
17 2225793..2226125  PHAGE_Aeromo_65: hypothetical protein; Kvar_2115; phage(gi326536733)  4e-22  Click
18 2226245..2229871  PHAGE_Pseudo_MP29: putative tail component protein; Kvar_2116; phage(gi215480016)  3e-78  Click
19 2229871..2230344  PHAGE_Pseudo_PAJU2: hypothetical protein PAJU2_gp19; Kvar_2117; phage(gi209552438)  3e-38  Click
20 2230331..2230813  PHAGE_Pseudo_phi297: hypothetical protein; Kvar_2118; phage(gi374531302)  3e-27  Click
21 2230823..2231203  PHAGE_Pseudo_phi297: hypothetical protein; Kvar_2119; phage(gi374531303)  4e-18  Click
22 2231203..2234289  PHAGE_Pseudo_PAJU2: hypothetical protein PAJU2_gp22; Kvar_2120; phage(gi209552441)  9e-78  Click
23 2234367..2236256  PHAGE_Entero_epsilon15: tail fiber; Kvar_2121; phage(gi30387399)  9e-59  Click