| Definition | Listeria monocytogenes 08-5923, complete genome. |
|---|---|
| Accession | NC_013768 |
| Length | 2,999,054 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 63 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1256386..1256997 | PHAGE_Uganda_virus: polyprotein; LM5923_1265; phage(gi314998982) | 2e-12 | Click |
| 2 | 1257034..1257558 | hypothetical protein; LM5923_1266 | N/A | Click |
| 3 | 1257669..1257742 | tRNA | N/A | Click |
| 4 | 1257727..1257748 | attL AATCCCTCTCAGGACGTAATAT | N/A | Click |
| 5 | complement(1257844..1258998) | PHAGE_Lister_2389: integrase; LM5923_1267; phage(gi17488529) | 0.0 | Click |
| 6 | complement(1259140..1259796) | hypothetical protein; LM5923_1268 | N/A | Click |
| 7 | complement(1259848..1260300) | PHAGE_Lister_B025: gp36; LM5923_1269; phage(gi157325252) | 3e-80 | Click |
| 8 | complement(1260317..1260640) | PHAGE_Lister_2389: Rep protein; LM5923_1270; phage(gi17488532) | 1e-40 | Click |
| 9 | complement(1261041..1261244) | hypothetical protein; LM5923_1271 | N/A | Click |
| 10 | 1261311..1261502 | PHAGE_Lister_2389: Gp28 protein; LM5923_1272; phage(gi17488533) | 9e-24 | Click |
| 11 | 1261524..1261766 | PHAGE_Lister_B025: gp39; LM5923_1273; phage(gi157325257) | 2e-42 | Click |
| 12 | 1262012..1262023 | attL AAATAATATTTA | N/A | Click |
| 13 | 1262189..1262341 | PHAGE_Lister_B025: gp41; LM5923_1274; phage(gi157325258) | 3e-15 | Click |
| 14 | 1262707..1262949 | hypothetical protein; LM5923_1275 | N/A | Click |
| 15 | 1263235..1263723 | PHAGE_Lister_B025: gp51; LM5923_1276; phage(gi157325268) | 3e-74 | Click |
| 16 | 1263766..1264230 | PHAGE_Lister_A118: putative methyltransferase; LM5923_1277; phage(gi16798837) | 6e-82 | Click |
| 17 | 1264227..1264940 | PHAGE_Lister_B025: gp42; LM5923_1278; phage(gi157325259) | 5e-134 | Click |
| 18 | 1264951..1265895 | PHAGE_Bacill_BCJA1c: integrase; LM5923_1279; phage(gi56694872) | 7e-51 | Click |
| 19 | 1265908..1266588 | PHAGE_Lister_B025: gp44; LM5923_1280; phage(gi157325261) | 4e-124 | Click |
| 20 | 1266585..1266818 | PHAGE_Lister_P40: gp42; LM5923_1281; phage(gi207270816) | 8e-14 | Click |
| 21 | 1266821..1267264 | hypothetical protein; LM5923_1282 | N/A | Click |
| 22 | 1267457..1267936 | hypothetical protein; LM5923_1283 | N/A | Click |
| 23 | 1267937..1268566 | PHAGE_Lister_P35: gp53; LM5923_1284; phage(gi157325418) | 1e-56 | Click |
| 24 | 1268585..1268818 | PHAGE_Bacill_W.Ph.: gp69; LM5923_1285; phage(gi371671129) | 4e-06 | Click |
| 25 | 1268815..1269033 | hypothetical protein; LM5923_1286 | N/A | Click |
| 26 | 1269003..1269194 | hypothetical protein; LM5923_1287 | N/A | Click |
| 27 | 1269397..1269660 | PHAGE_Lister_2389: Gp41 protein; LM5923_1288; phage(gi17488546) | 4e-26 | Click |
| 28 | 1269663..1269836 | PHAGE_Lister_2389: Gp44; LM5923_1289; phage(gi17488549) | 3e-26 | Click |
| 29 | 1269833..1270216 | PHAGE_Lister_B025: gp55; LM5923_1290; phage(gi157325272) | 7e-64 | Click |
| 30 | 1270218..1270697 | PHAGE_Lister_B025: gp56; LM5923_1291; phage(gi157325273) | 8e-80 | Click |
| 31 | 1270717..1271406 | PHAGE_Lister_2389: Gp47 protein; LM5923_1292; phage(gi17488552) | 5e-127 | Click |
| 32 | 1271584..1272726 | PHAGE_Lister_B025: gp58; LM5923_1293; phage(gi157325275) | 0.0 | Click |
| 33 | 1272751..1273233 | PHAGE_Lister_B025: gp59; LM5923_1294; phage(gi157325277) | 9e-90 | Click |
| 34 | 1273256..1275544 | PHAGE_Lister_B025: gp60; LM5923_1295; phage(gi157325276) | 0.0 | Click |
| 35 | 1275878..1276195 | PHAGE_Lister_B025: gp61; LM5923_1296; phage(gi157325278) | 9e-50 | Click |
| 36 | 1276197..1276409 | hypothetical protein; LM5923_1297 | N/A | Click |
| 37 | 1276857..1277396 | PHAGE_Lister_B025: gp62; LM5923_1298; phage(gi157325279) | 1e-76 | Click |
| 38 | 1277691..1277840 | hypothetical protein; LM5923_1299 | N/A | Click |
| 39 | 1277882..1278307 | PHAGE_Lister_2389: Gp53 protein; LM5923_1300; phage(gi17488558) | 4e-55 | Click |
| 40 | 1278405..1279148 | hypothetical protein; LM5923_1301 | N/A | Click |
| 41 | 1279943..1280257 | PHAGE_Lister_B025: gp65; LM5923_1302; phage(gi157325282) | 2e-60 | Click |
| 42 | 1280307..1280663 | PHAGE_Lister_B025: gp1; LM5923_1303; phage(gi157325218) | 5e-48 | Click |
| 43 | 1280660..1282303 | PHAGE_Lister_B025: putative terminase large subunit; LM5923_1304; phage(gi157325219) | 0.0 | Click |
| 44 | complement(1282313..1282702) | PHAGE_Staphy_phiN315: hypothetical protein SA1800; LM5923_1305; phage(gi30043979) | 9e-19 | Click |
| 45 | 1282753..1283883 | PHAGE_Staphy_P954: HK97 family phage portal protein; LM5923_1306; phage(gi257136404) | 4e-107 | Click |
| 46 | 1283880..1284596 | PHAGE_Lister_B025: gp4; LM5923_1307; phage(gi157325221) | 2e-67 | Click |
| 47 | 1284623..1285774 | PHAGE_Staphy_P954: major capsid protein a; LM5923_1308; phage(gi257136406) | 3e-122 | Click |
| 48 | 1285781..1285951 | PHAGE_Lister_B025: gp6; LM5923_1309; phage(gi157325223) | 5e-24 | Click |
| 49 | 1285961..1286260 | PHAGE_Lister_B025: gp7; LM5923_1310; phage(gi157325224) | 7e-50 | Click |
| 50 | 1286244..1286609 | PHAGE_Lister_B025: gp8; LM5923_1311; phage(gi157325226) | 4e-64 | Click |
| 51 | 1286606..1287007 | PHAGE_Lister_B025: gp9; LM5923_1312; phage(gi157325225) | 3e-69 | Click |
| 52 | 1287004..1287387 | PHAGE_Lister_B025: gp10; LM5923_1313; phage(gi157325227) | 2e-63 | Click |
| 53 | 1287408..1287995 | PHAGE_Staphy_phiSLT: major tail protein; LM5923_1314; phage(gi12719438) | 2e-27 | Click |
| 54 | 1288066..1288398 | PHAGE_Lister_B025: gp12; LM5923_1315; phage(gi157325229) | 7e-56 | Click |
| 55 | 1288449..1288610 | PHAGE_Lister_B025: gp13; LM5923_1316; phage(gi157325230) | 1e-21 | Click |
| 56 | 1288614..1293545 | PHAGE_Bacill_BtCS33: phage tail tape measure protein; LM5923_1317; phage(gi392972722) | 1e-122 | Click |
| 57 | 1293533..1295182 | PHAGE_Bacill_phIS3501: phage tail component; LM5923_1318; phage(gi422934339) | 3e-17 | Click |
| 58 | 1295195..1297489 | PHAGE_Lactob_JCL1032: putative tail component; LM5923_1319; phage(gi418489128) | 2e-35 | Click |
| 59 | 1297476..1298573 | PHAGE_Lister_A006: gp17; LM5923_1320; phage(gi157325431) | 8e-112 | Click |
| 60 | 1298621..1298923 | PHAGE_Lister_A006: gp18; LM5923_1321; phage(gi157325432) | 1e-44 | Click |
| 61 | 1298923..1299180 | PHAGE_Lactob_A2: holin; LM5923_1322; phage(gi22296539) | 5e-11 | Click |
| 62 | 1299180..1300025 | PHAGE_Lister_A118: L-alanoyl-D-glutamate peptidase; LM5923_1323; phage(gi16798808) | 1e-143 | Click |
| 63 | 1300129..1301127 | hypothetical protein; LM5923_1324 | N/A | Click |
| 64 | complement(1301352..1301534) | PHAGE_Strept_M102: hypothetical protein M102_gp24; LM5923_1325; phage(gi242345595) | 3e-09 | Click |
| 65 | complement(1301740..1301841) | hypothetical protein; LM5923_1326 | N/A | Click |
| 66 | 1301975..1302208 | PHAGE_Lister_B025: gp32; LM5923_1327; phage(gi157325250) | 2e-39 | Click |
| 67 | 1302391..1302402 | attR AAATAATATTTA | N/A | Click |
| 68 | 1302474..1302495 | attR AATCCCTCTCAGGACGTAATAT | N/A | Click |
Region 2, total : 59 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2430478..2430490 | attL AACTAAAAATTTC | N/A | Click |
| 2 | complement(2444791..2445024) | PHAGE_Lister_A006: gp26; LM5923_2424; phage(gi157325441) | 6e-36 | Click |
| 3 | 2445158..2445259 | hypothetical protein; LM5923_2425 | N/A | Click |
| 4 | 2445465..2445674 | PHAGE_Strept_M102: hypothetical protein M102_gp24; LM5923_2426; phage(gi242345595) | 4e-09 | Click |
| 5 | 2445776..2446180 | hypothetical protein; LM5923_2427 | N/A | Click |
| 6 | 2446182..2446610 | PHAGE_Lister_B054: gp34; LM5923_2428; phage(gi157325318) | 3e-30 | Click |
| 7 | 2446622..2447119 | PHAGE_Lister_A006: gp22; LM5923_2429; phage(gi157325437) | 8e-86 | Click |
| 8 | 2447394..2448167 | PHAGE_Lister_A006: gp21; LM5923_2430; phage(gi157325436) | 9e-152 | Click |
| 9 | complement(2448208..2449053) | PHAGE_Lister_A006: PlyA006; LM5923_2431; phage(gi157325435) | 4e-41 | Click |
| 10 | complement(2449053..2449334) | PHAGE_Lister_A118: holin; LM5923_2432; phage(gi16798807) | 1e-47 | Click |
| 11 | complement(2449347..2449712) | PHAGE_Lister_A118: gp23; LM5923_2433; phage(gi16798806) | 8e-63 | Click |
| 12 | complement(2449751..2451913) | PHAGE_Lister_A006: gp17; LM5923_2434; phage(gi157325431) | 0.0 | Click |
| 13 | complement(2451926..2453494) | PHAGE_Lister_A006: gp16; LM5923_2435; phage(gi157325430) | 0.0 | Click |
| 14 | complement(2453491..2458290) | PHAGE_Lister_A006: gp15; LM5923_2436; phage(gi157325429) | 0.0 | Click |
| 15 | complement(2458295..2458528) | PHAGE_Lister_A006: gp14; LM5923_2437; phage(gi157325428) | 5e-37 | Click |
| 16 | complement(2458603..2459034) | PHAGE_Lister_A006: gp13; LM5923_2438; phage(gi157325427) | 2e-73 | Click |
| 17 | complement(2459090..2459776) | PHAGE_Lister_A006: Tsh; LM5923_2439; phage(gi157325426) | 1e-121 | Click |
| 18 | complement(2459781..2460152) | PHAGE_Lister_A006: gp11; LM5923_2440; phage(gi157325425) | 1e-64 | Click |
| 19 | complement(2460149..2460466) | PHAGE_Lister_A006: gp10; LM5923_2441; phage(gi157325424) | 2e-53 | Click |
| 20 | complement(2460456..2460821) | PHAGE_Lister_A006: gp9; LM5923_2442; phage(gi157325484) | 3e-66 | Click |
| 21 | complement(2460821..2461174) | PHAGE_Lister_A006: gp8; LM5923_2443; phage(gi157325483) | 7e-64 | Click |
| 22 | complement(2461175..2461342) | PHAGE_Lister_A006: gp7; LM5923_2444; phage(gi157325482) | 6e-18 | Click |
| 23 | complement(2461356..2462228) | PHAGE_Lister_A006: Cps; LM5923_2445; phage(gi157325479) | 7e-164 | Click |
| 24 | complement(2462251..2462805) | PHAGE_Lister_A006: gp5; LM5923_2446; phage(gi157325467) | 4e-103 | Click |
| 25 | complement(2462901..2463944) | PHAGE_Lister_A006: gp4; LM5923_2447; phage(gi157325456) | 0.0 | Click |
| 26 | complement(2463949..2465505) | PHAGE_Lister_A006: gp3; LM5923_2448; phage(gi157325445) | 0.0 | Click |
| 27 | complement(2465520..2466839) | PHAGE_Lister_A006: TerL; LM5923_2449; phage(gi157325434) | 0.0 | Click |
| 28 | complement(2466832..2467572) | PHAGE_Lister_A006: TerS; LM5923_2450; phage(gi157325423) | 3e-137 | Click |
| 29 | complement(2467612..2467839) | PHAGE_Lister_A006: gp62; LM5923_2451; phage(gi157325481) | 3e-36 | Click |
| 30 | complement(2468125..2468559) | PHAGE_Lister_A006: gp59; LM5923_2452; phage(gi157325477) | 2e-77 | Click |
| 31 | complement(2468582..2468707) | PHAGE_Lister_A500: gp60; LM5923_2453; phage(gi157325019) | 1e-16 | Click |
| 32 | complement(2468700..2469083) | PHAGE_Lister_A500: gp59; LM5923_2454; phage(gi157325018) | 4e-61 | Click |
| 33 | complement(2469087..2469491) | PHAGE_Lister_A500: gp58; LM5923_2455; phage(gi157325017) | 1e-64 | Click |
| 34 | complement(2469646..2470023) | hypothetical protein; LM5923_2456 | N/A | Click |
| 35 | complement(2470045..2470524) | PHAGE_Lister_A006: gp53; LM5923_2457; phage(gi157325471) | 1e-81 | Click |
| 36 | complement(2470521..2470922) | PHAGE_Lister_A006: gp52; LM5923_2458; phage(gi157325470) | 1e-52 | Click |
| 37 | complement(2470919..2471278) | PHAGE_Pseudo_Lu11: hypothetical protein; LM5923_2459; phage(gi388684677) | 7e-05 | Click |
| 38 | complement(2471300..2471548) | PHAGE_Entero_phiEF24C: hypothetical protein EFP_gp164; LM5923_2460; phage(gi158079460) | 9e-16 | Click |
| 39 | complement(2471666..2472196) | PHAGE_Thermu_phiYS40: sugar-phospahte nucleotidyltransferase; LM5923_2461; phage(gi118197649) | 8e-16 | Click |
| 40 | complement(2472193..2472480) | PHAGE_Lister_A500: gp36; LM5923_2462; phage(gi157324995) | 1e-13 | Click |
| 41 | complement(2472477..2473460) | PHAGE_Lister_A006: gp43; LM5923_2463; phage(gi157325460) | 2e-73 | Click |
| 42 | complement(2473477..2474136) | PHAGE_Lister_A500: gp44; LM5923_2464; phage(gi157325003) | 1e-118 | Click |
| 43 | complement(2474142..2474618) | PHAGE_Lister_A500: gp43; LM5923_2465; phage(gi157325002) | 7e-78 | Click |
| 44 | complement(2474615..2474809) | PHAGE_Lister_A500: gp42; LM5923_2466; phage(gi157325001) | 1e-30 | Click |
| 45 | complement(2474905..2475033) | PHAGE_Lister_A500: gp41; LM5923_2467; phage(gi157325000) | 7e-19 | Click |
| 46 | complement(2475115..2475303) | PHAGE_Lister_A006: gp39; LM5923_2468; phage(gi157325455) | 5e-22 | Click |
| 47 | complement(2475412..2475627) | PHAGE_Lister_A118: gp44; LM5923_2469; phage(gi16798831) | 3e-31 | Click |
| 48 | complement(2475624..2476157) | PHAGE_Lister_A006: gp37; LM5923_2470; phage(gi157325453) | 2e-80 | Click |
| 49 | complement(2476281..2477057) | PHAGE_Lister_A500: gp37; LM5923_2471; phage(gi157324996) | 3e-120 | Click |
| 50 | complement(2477320..2477601) | PHAGE_Lister_A006: gp34; LM5923_2472; phage(gi157325450) | 7e-42 | Click |
| 51 | complement(2477598..2477834) | PHAGE_Lister_A006: gp33; LM5923_2473; phage(gi157325449) | 6e-38 | Click |
| 52 | 2477899..2478258 | PHAGE_Staphy_phiN315: hypothetical protein SA1800; LM5923_2474; phage(gi30043979) | 2e-06 | Click |
| 53 | complement(2478415..2478666) | PHAGE_Lister_A500: gp34; LM5923_2475; phage(gi157324993) | 3e-24 | Click |
| 54 | 2478829..2479134 | PHAGE_Lister_A006: gp31; LM5923_2476; phage(gi157325447) | 7e-29 | Click |
| 55 | 2479165..2479656 | PHAGE_Lister_A006: gp30; LM5923_2477; phage(gi157325446) | 1e-93 | Click |
| 56 | 2479683..2480390 | hypothetical protein; LM5923_2478 | N/A | Click |
| 57 | 2480449..2480883 | hypothetical protein; LM5923_2479 | N/A | Click |
| 58 | 2481088..2482602 | PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; LM5923_2480; phage(gi9631364) | 4e-05 | Click |
| 59 | 2482371..2482383 | attR AACTAAAAATTTC | N/A | Click |
| 60 | 2482663..2484021 | PHAGE_Lister_A118: putative integrase; LM5923_2481; phage(gi16798814) | 0.0 | Click |
| 61 | complement(2484543..2484890) | PHAGE_Bacill_phBC6A51: Transcriptional regulator; LM5923_2482; phage(gi31415744) | 5e-07 | Click |
Region 3, total : 26 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2859620..2861128 | PHAGE_Staphy_42E: ORF012; LM5923_2835; phage(gi66395520) | 3e-18 | Click |
| 2 | complement(2861198..2861947) | hypothetical protein; LM5923_2836 | N/A | Click |
| 3 | 2862135..2864489 | PROPHAGE_Pseudo_PAO1: coat protein A of bacteriophage Pf1; LM5923_2837; phage(gi15595921) | 7e-08 | Click |
| 4 | complement(2864528..2865256) | PHAGE_Bacill_SPP1: hypothetical protein SPP1p051; LM5923_2838; phage(gi22855096) | 5e-37 | Click |
| 5 | complement(2865237..2865659) | PHAGE_Bacill_WBeta: phage holin; LM5923_2839; phage(gi85701395) | 6e-32 | Click |
| 6 | complement(2865678..2866214) | PHAGE_Lister_B025: gp19; LM5923_2840; phage(gi157325236) | 1e-13 | Click |
| 7 | complement(2866211..2866690) | PHAGE_Deep_s_D6E: tail fiber protein; LM5923_2841; phage(gi423262345) | 2e-06 | Click |
| 8 | complement(2866705..2867280) | hypothetical protein; LM5923_2842 | N/A | Click |
| 9 | complement(2867295..2867594) | PHAGE_Deep_s_D6E: tail fiber protein; LM5923_2843; phage(gi423262345) | 5e-05 | Click |
| 10 | complement(2867584..2868720) | PHAGE_Lister_A500: gp18; LM5923_2844; phage(gi157324978) | 2e-49 | Click |
| 11 | complement(2868730..2869548) | PHAGE_Staphy_StB20: tail protein; LM5923_2845; phage(gi431809781) | 6e-40 | Click |
| 12 | complement(2869545..2871413) | PHAGE_Propio_ATCC29399B_C: putative tape measure; LM5923_2846; phage(gi410507479) | 4e-48 | Click |
| 13 | complement(2871400..2871804) | PHAGE_Strept_5: hypothetical protein SpyM3_1314; LM5923_2847; phage(gi28876396) | 7e-24 | Click |
| 14 | complement(2871846..2872148) | PHAGE_Strept_5: hypothetical protein SpyM3_1315; LM5923_2848; phage(gi28876397) | 9e-08 | Click |
| 15 | complement(2872196..2872708) | PHAGE_Strept_5: hypothetical protein SpyM3_1316; LM5923_2849; phage(gi28876398) | 5e-55 | Click |
| 16 | complement(2872721..2873110) | PHAGE_Strept_5: hypothetical protein SpyM3_1317; LM5923_2850; phage(gi28876399) | 5e-06 | Click |
| 17 | complement(2873388..2873804) | PHAGE_Lister_A500: gp62; LM5923_2851; phage(gi157325021) | 1e-23 | Click |
| 18 | complement(2873816..2874244) | PHAGE_Lister_A118: gp61; LM5923_2852; phage(gi16798848) | 2e-16 | Click |
| 19 | 2874461..2874796 | PHAGE_Staphy_92: ORF019; LM5923_2853; phage(gi66396425) | 4e-15 | Click |
| 20 | 2874802..2875254 | PHAGE_Lister_B025: gp36; LM5923_2854; phage(gi157325252) | 1e-33 | Click |
| 21 | 2875473..2876168 | hypothetical protein; LM5923_2855 | N/A | Click |
| 22 | complement(2876138..2876836) | hypothetical protein; LM5923_2856 | N/A | Click |
| 23 | complement(2876952..2878067) | PHAGE_Acanth_moumouvirus: putative triacylglycerol lipase; LM5923_2857; phage(gi441432487) | 2e-19 | Click |
| 24 | complement(2878103..2878936) | hypothetical protein; LM5923_2858 | N/A | Click |
| 25 | 2879079..2880821 | PHAGE_Bacill_SPBc2: ABC transporter; LM5923_2859; phage(gi9630145) | 1e-30 | Click |
| 26 | 2880814..2882595 | PHAGE_Bacill_SPBc2: ABC transporter; LM5923_2860; phage(gi9630145) | 4e-35 | Click |