Definition Xanthomonas albilineans GPE PC73 chromosome, complete genome.
Accession NC_013722
Length 3,768,695
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 18 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(230791..231288)  PHAGE_Xylell_Xfas53: gp18; XALc_0193; phage(gi273810437)  4e-14  Click
2 complement(231511..231744)  hypothetical protein; XALc_0194  N/A  Click
3 231937..232464  PHAGE_Stenot_S1: hypothetical protein StPS1_gp46; XALc_0195; phage(gi213163945)  6e-40  Click
4 232466..232681  hypothetical protein; XALc_0196  N/A  Click
5 232828..233022  hypothetical protein; XALc_0197  N/A  Click
6 232951..232962  attL    CACGCCGCCGCG  N/A  Click
7 233259..235727  PHAGE_Stenot_S1: putative primase; XALc_0198; phage(gi213163899)  0.0  Click
8 236084..236710  PHAGE_Stenot_S1: putative terminase small subunit; XALc_0199; phage(gi213163901)  2e-24  Click
9 237006..237311  PHAGE_Burkho_Bcep176: gp49; XALc_0200; phage(gi77864674)  2e-09  Click
10 237362..237589  hypothetical protein; XALc_0201  N/A  Click
11 237586..238029  PHAGE_Entero_IME10: hypothetical protein; XALc_0202; phage(gi422934273)  2e-11  Click
12 238328..239617  PHAGE_Vibrio_CP_T1: putative methylase; XALc_0203; phage(gi418489199)  2e-48  Click
13 239863..240066  PHAGE_Pseudo_Lu11: hypothetical protein; XALc_0204; phage(gi388684876)  1e-06  Click
14 240063..240320  hypothetical protein; XALc_0205  N/A  Click
15 240317..242512  PHAGE_Stenot_S1: putative terminase large subunit; XALc_0206; phage(gi213163902)  0.0  Click
16 242525..242878  hypothetical protein; XALc_0207  N/A  Click
17 243008..243223  hypothetical protein; XALc_0208  N/A  Click
18 243225..244853  PHAGE_Provid_Redjac: phage portal protein; XALc_0209; phage(gi410490794)  1e-46  Click
19 244850..246151  PHAGE_Klebsi_phiKO2: putative head maturation protease; XALc_0210; phage(gi46402091)  3e-28  Click
20 252544..252555  attR    CACGCCGCCGCG  N/A  Click
Region 2, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 251524..252282  PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0222; phage(gi448244628)  4e-26  Click
2 252286..252804  PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0223; phage(gi448244629)  3e-09  Click
3 252932..256642  PHAGE_Pseudo_MP29: putative tail component protein; XALc_0224; phage(gi215480016)  1e-59  Click
4 253436..253448  attL    GCCGCCGCCGCAG  N/A  Click
5 256642..257565  PHAGE_Burkho_KL1: hypothetical protein; XALc_0225; phage(gi399528705)  1e-32  Click
6 257565..258473  PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0226; phage(gi448244632)  2e-21  Click
7 258470..260173  PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0227; phage(gi448244633)  7e-128  Click
8 260170..260997  PHAGE_Salmon_iEPS5: putative tail assembly protein 2; XALc_0228; phage(gi526176452)  1e-47  Click
9 260997..263471  PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0229; phage(gi448244637)  1e-125  Click
10 263474..264292  hypothetical protein; XALc_0230  N/A  Click
11 264350..265141  PHAGE_Stenot_S1: putative methylase; XALc_0231; phage(gi213163922)  1e-116  Click
12 265340..265717  hypothetical protein; XALc_0232  N/A  Click
13 265710..266282  hypothetical protein; XALc_0233  N/A  Click
14 266438..266866  hypothetical protein; XALc_0234  N/A  Click
15 266863..267306  hypothetical protein; XALc_0235  N/A  Click
16 267440..267883  PHAGE_Rhodob_RcapMu: hypothetical protein; XALc_0236; phage(gi356870842)  7e-19  Click
17 268039..268413  hypothetical protein; XALc_0237  N/A  Click
18 268413..268703  hypothetical protein; XALc_0238  N/A  Click
19 268729..269193  hypothetical protein; XALc_0239  N/A  Click
20 269220..269699  hypothetical protein; XALc_0240  N/A  Click
21 270038..270520  hypothetical protein; XALc_0241  N/A  Click
22 270626..270638  attR    GCCGCCGCCGCAG  N/A  Click
23 complement(270640..271683)  PHAGE_Burkho_AH2: integrase; XALc_0242; phage(gi399529076)  8e-52  Click
Region 3, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2842255..2842626)  site-specific integrase/resolvase; XALc_2383  N/A  Click
2 complement(2842626..2844014)  PHAGE_Deep_s_D6E: recombinase; XALc_2384; phage(gi423262352)  5e-41  Click
3 complement(2844011..2844463)  hypothetical protein; XALc_2385  N/A  Click
4 complement(2844460..2844651)  conservd protein; XALc_2386  N/A  Click
5 2845054..2845317  hypothetical protein; XALc_2387  N/A  Click
6 2845431..2845706  hypothetical protein; XALc_2388  N/A  Click
7 2845745..2845960  hypothetical protein; XALc_2389  N/A  Click
8 2845957..2848221  PHAGE_Bacill_phi105: hypothetical protein phi105_42; XALc_2390; phage(gi22855035)  5e-76  Click
9 2848366..2848830  PHAGE_Tetras_SI1: hypothetical protein; XALc_2391; phage(gi472342269)  1e-05  Click
10 2848835..2849038  hypothetical protein; XALc_2392  N/A  Click
11 2849031..2849459  hypothetical protein; XALc_2393  N/A  Click
12 2849628..2850926  PHAGE_Psychr_pOW20_A: DNA methylase; XALc_2394; phage(gi472339820)  9e-72  Click
13 complement(2851041..2851304)  hypothetical protein; XALc_2395  N/A  Click
14 complement(2851463..2851933)  hypothetical protein; XALc_2396  N/A  Click
15 2852041..2852406  PHAGE_Burkho_phi644_2: gp71; XALc_2397; phage(gi134288643)  2e-34  Click
16 2852659..2852865  hypothetical protein; XALc_2398  N/A  Click
17 2852852..2853316  PHAGE_Burkho_phi644_2: gp1, phage terminase, small subunit, P27 family; XALc_2399; phage(gi134288627)  1e-07  Click
18 2853405..2853599  phage terminase, small subunit, truncated protein; XALc_2400  N/A  Click
19 2853725..2853919  isxal4 transposase (fragment) protein; XALc_2401  N/A  Click
20 complement(2854013..2854402)  hypothetical protein; XALc_2402  N/A  Click
21 complement(2854350..2854613)  hypothetical protein; XALc_2403  N/A  Click
22 complement(2854641..2854913)  hypothetical protein; XALc_2404  N/A  Click
23 2855309..2856232  PROPHAGE_Xantho_33913: IS1477 transposase; XALc_2405; phage(gi77747809)  5e-35  Click
Region 4, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3107687..3107698  attL    GCCATGAGCTGG  N/A  Click
2 complement(3108036..3109424)  PHAGE_Deep_s_D6E: recombinase; XALc_2617; phage(gi423262352)  2e-41  Click
3 complement(3109421..3109873)  hypothetical protein; XALc_2618  N/A  Click
4 complement(3109870..3110061)  hypothetical protein; XALc_2619  N/A  Click
5 3110194..3110508  hypothetical protein; XALc_2620  N/A  Click
6 3111092..3111322  hypothetical protein; XALc_2621  N/A  Click
7 3111383..3111676  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; XALc_Yp03; phage(gi24373865)  4e-10  Click
8 3111721..3112533  PROPHAGE_Escher_CFT073: transposase insF; XALc_2622; phage(gi26249410)  6e-51  Click
9 3112538..3112894  PHAGE_Paenib_phiIBB_Pl23: RuvC-like protein; XALc_2623; phage(gi526245072)  3e-05  Click
10 3112899..3113102  hypothetical protein; XALc_2624  N/A  Click
11 3113095..3113523  hypothetical protein; XALc_2625  N/A  Click
12 3113734..3114990  PHAGE_Psychr_pOW20_A: DNA methylase; XALc_2626; phage(gi472339820)  2e-70  Click
13 complement(3115105..3115368)  hypothetical protein; XALc_2627  N/A  Click
14 complement(3115527..3116033)  hypothetical protein; XALc_2628  N/A  Click
15 3116105..3116470  PHAGE_Burkho_phi644_2: gp71; XALc_2629; phage(gi134288643)  2e-34  Click
16 3116928..3117392  PHAGE_Burkho_phi644_2: gp1, phage terminase, small subunit, P27 family; XALc_2630; phage(gi134288627)  7e-07  Click
17 complement(3117442..3118353)  PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; XALc_2631; phage(gi17975200)  3e-133  Click
18 3129023..3129034  attR    GCCATGAGCTGG  N/A  Click