Definition | Xanthomonas albilineans GPE PC73 chromosome, complete genome. |
---|---|
Accession | NC_013722 |
Length | 3,768,695 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 18 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(230791..231288) | PHAGE_Xylell_Xfas53: gp18; XALc_0193; phage(gi273810437) | 4e-14 | Click |
2 | complement(231511..231744) | hypothetical protein; XALc_0194 | N/A | Click |
3 | 231937..232464 | PHAGE_Stenot_S1: hypothetical protein StPS1_gp46; XALc_0195; phage(gi213163945) | 6e-40 | Click |
4 | 232466..232681 | hypothetical protein; XALc_0196 | N/A | Click |
5 | 232828..233022 | hypothetical protein; XALc_0197 | N/A | Click |
6 | 232951..232962 | attL CACGCCGCCGCG | N/A | Click |
7 | 233259..235727 | PHAGE_Stenot_S1: putative primase; XALc_0198; phage(gi213163899) | 0.0 | Click |
8 | 236084..236710 | PHAGE_Stenot_S1: putative terminase small subunit; XALc_0199; phage(gi213163901) | 2e-24 | Click |
9 | 237006..237311 | PHAGE_Burkho_Bcep176: gp49; XALc_0200; phage(gi77864674) | 2e-09 | Click |
10 | 237362..237589 | hypothetical protein; XALc_0201 | N/A | Click |
11 | 237586..238029 | PHAGE_Entero_IME10: hypothetical protein; XALc_0202; phage(gi422934273) | 2e-11 | Click |
12 | 238328..239617 | PHAGE_Vibrio_CP_T1: putative methylase; XALc_0203; phage(gi418489199) | 2e-48 | Click |
13 | 239863..240066 | PHAGE_Pseudo_Lu11: hypothetical protein; XALc_0204; phage(gi388684876) | 1e-06 | Click |
14 | 240063..240320 | hypothetical protein; XALc_0205 | N/A | Click |
15 | 240317..242512 | PHAGE_Stenot_S1: putative terminase large subunit; XALc_0206; phage(gi213163902) | 0.0 | Click |
16 | 242525..242878 | hypothetical protein; XALc_0207 | N/A | Click |
17 | 243008..243223 | hypothetical protein; XALc_0208 | N/A | Click |
18 | 243225..244853 | PHAGE_Provid_Redjac: phage portal protein; XALc_0209; phage(gi410490794) | 1e-46 | Click |
19 | 244850..246151 | PHAGE_Klebsi_phiKO2: putative head maturation protease; XALc_0210; phage(gi46402091) | 3e-28 | Click |
20 | 252544..252555 | attR CACGCCGCCGCG | N/A | Click |
Region 2, total : 21 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 251524..252282 | PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0222; phage(gi448244628) | 4e-26 | Click |
2 | 252286..252804 | PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0223; phage(gi448244629) | 3e-09 | Click |
3 | 252932..256642 | PHAGE_Pseudo_MP29: putative tail component protein; XALc_0224; phage(gi215480016) | 1e-59 | Click |
4 | 253436..253448 | attL GCCGCCGCCGCAG | N/A | Click |
5 | 256642..257565 | PHAGE_Burkho_KL1: hypothetical protein; XALc_0225; phage(gi399528705) | 1e-32 | Click |
6 | 257565..258473 | PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0226; phage(gi448244632) | 2e-21 | Click |
7 | 258470..260173 | PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0227; phage(gi448244633) | 7e-128 | Click |
8 | 260170..260997 | PHAGE_Salmon_iEPS5: putative tail assembly protein 2; XALc_0228; phage(gi526176452) | 1e-47 | Click |
9 | 260997..263471 | PHAGE_Pseudo_JBD30: hypothetical protein; XALc_0229; phage(gi448244637) | 1e-125 | Click |
10 | 263474..264292 | hypothetical protein; XALc_0230 | N/A | Click |
11 | 264350..265141 | PHAGE_Stenot_S1: putative methylase; XALc_0231; phage(gi213163922) | 1e-116 | Click |
12 | 265340..265717 | hypothetical protein; XALc_0232 | N/A | Click |
13 | 265710..266282 | hypothetical protein; XALc_0233 | N/A | Click |
14 | 266438..266866 | hypothetical protein; XALc_0234 | N/A | Click |
15 | 266863..267306 | hypothetical protein; XALc_0235 | N/A | Click |
16 | 267440..267883 | PHAGE_Rhodob_RcapMu: hypothetical protein; XALc_0236; phage(gi356870842) | 7e-19 | Click |
17 | 268039..268413 | hypothetical protein; XALc_0237 | N/A | Click |
18 | 268413..268703 | hypothetical protein; XALc_0238 | N/A | Click |
19 | 268729..269193 | hypothetical protein; XALc_0239 | N/A | Click |
20 | 269220..269699 | hypothetical protein; XALc_0240 | N/A | Click |
21 | 270038..270520 | hypothetical protein; XALc_0241 | N/A | Click |
22 | 270626..270638 | attR GCCGCCGCCGCAG | N/A | Click |
23 | complement(270640..271683) | PHAGE_Burkho_AH2: integrase; XALc_0242; phage(gi399529076) | 8e-52 | Click |
Region 3, total : 23 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(2842255..2842626) | site-specific integrase/resolvase; XALc_2383 | N/A | Click |
2 | complement(2842626..2844014) | PHAGE_Deep_s_D6E: recombinase; XALc_2384; phage(gi423262352) | 5e-41 | Click |
3 | complement(2844011..2844463) | hypothetical protein; XALc_2385 | N/A | Click |
4 | complement(2844460..2844651) | conservd protein; XALc_2386 | N/A | Click |
5 | 2845054..2845317 | hypothetical protein; XALc_2387 | N/A | Click |
6 | 2845431..2845706 | hypothetical protein; XALc_2388 | N/A | Click |
7 | 2845745..2845960 | hypothetical protein; XALc_2389 | N/A | Click |
8 | 2845957..2848221 | PHAGE_Bacill_phi105: hypothetical protein phi105_42; XALc_2390; phage(gi22855035) | 5e-76 | Click |
9 | 2848366..2848830 | PHAGE_Tetras_SI1: hypothetical protein; XALc_2391; phage(gi472342269) | 1e-05 | Click |
10 | 2848835..2849038 | hypothetical protein; XALc_2392 | N/A | Click |
11 | 2849031..2849459 | hypothetical protein; XALc_2393 | N/A | Click |
12 | 2849628..2850926 | PHAGE_Psychr_pOW20_A: DNA methylase; XALc_2394; phage(gi472339820) | 9e-72 | Click |
13 | complement(2851041..2851304) | hypothetical protein; XALc_2395 | N/A | Click |
14 | complement(2851463..2851933) | hypothetical protein; XALc_2396 | N/A | Click |
15 | 2852041..2852406 | PHAGE_Burkho_phi644_2: gp71; XALc_2397; phage(gi134288643) | 2e-34 | Click |
16 | 2852659..2852865 | hypothetical protein; XALc_2398 | N/A | Click |
17 | 2852852..2853316 | PHAGE_Burkho_phi644_2: gp1, phage terminase, small subunit, P27 family; XALc_2399; phage(gi134288627) | 1e-07 | Click |
18 | 2853405..2853599 | phage terminase, small subunit, truncated protein; XALc_2400 | N/A | Click |
19 | 2853725..2853919 | isxal4 transposase (fragment) protein; XALc_2401 | N/A | Click |
20 | complement(2854013..2854402) | hypothetical protein; XALc_2402 | N/A | Click |
21 | complement(2854350..2854613) | hypothetical protein; XALc_2403 | N/A | Click |
22 | complement(2854641..2854913) | hypothetical protein; XALc_2404 | N/A | Click |
23 | 2855309..2856232 | PROPHAGE_Xantho_33913: IS1477 transposase; XALc_2405; phage(gi77747809) | 5e-35 | Click |
Region 4, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3107687..3107698 | attL GCCATGAGCTGG | N/A | Click |
2 | complement(3108036..3109424) | PHAGE_Deep_s_D6E: recombinase; XALc_2617; phage(gi423262352) | 2e-41 | Click |
3 | complement(3109421..3109873) | hypothetical protein; XALc_2618 | N/A | Click |
4 | complement(3109870..3110061) | hypothetical protein; XALc_2619 | N/A | Click |
5 | 3110194..3110508 | hypothetical protein; XALc_2620 | N/A | Click |
6 | 3111092..3111322 | hypothetical protein; XALc_2621 | N/A | Click |
7 | 3111383..3111676 | PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; XALc_Yp03; phage(gi24373865) | 4e-10 | Click |
8 | 3111721..3112533 | PROPHAGE_Escher_CFT073: transposase insF; XALc_2622; phage(gi26249410) | 6e-51 | Click |
9 | 3112538..3112894 | PHAGE_Paenib_phiIBB_Pl23: RuvC-like protein; XALc_2623; phage(gi526245072) | 3e-05 | Click |
10 | 3112899..3113102 | hypothetical protein; XALc_2624 | N/A | Click |
11 | 3113095..3113523 | hypothetical protein; XALc_2625 | N/A | Click |
12 | 3113734..3114990 | PHAGE_Psychr_pOW20_A: DNA methylase; XALc_2626; phage(gi472339820) | 2e-70 | Click |
13 | complement(3115105..3115368) | hypothetical protein; XALc_2627 | N/A | Click |
14 | complement(3115527..3116033) | hypothetical protein; XALc_2628 | N/A | Click |
15 | 3116105..3116470 | PHAGE_Burkho_phi644_2: gp71; XALc_2629; phage(gi134288643) | 2e-34 | Click |
16 | 3116928..3117392 | PHAGE_Burkho_phi644_2: gp1, phage terminase, small subunit, P27 family; XALc_2630; phage(gi134288627) | 7e-07 | Click |
17 | complement(3117442..3118353) | PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; XALc_2631; phage(gi17975200) | 3e-133 | Click |
18 | 3129023..3129034 | attR GCCATGAGCTGG | N/A | Click |