Definition Edwardsiella tarda EIB202 chromosome, complete genome.
Accession NC_013508
Length 3,760,463
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1721332..1721592)  PHAGE_Salmon_1: putative transcriptional regulator (repressor); ETAE_1614; phage(gi169257171)  9e-21  Click
2 1722129..1722344  PHAGE_Salmon_ST160: Cro; ETAE_1615; phage(gi318065926)  4e-11  Click
3 1722442..1722798  hypothetical protein; ETAE_1616  N/A  Click
4 1722795..1723028  hypothetical protein; ETAE_1617  N/A  Click
5 1723060..1723311  hypothetical protein; ETAE_1618  N/A  Click
6 1723514..1724512  PHAGE_Entero_mEp460: replication protein; ETAE_1619; phage(gi428782359)  9e-25  Click
7 1724515..1724817  PHAGE_Pseudo_F116: hypothetical protein F116p35; ETAE_1620; phage(gi56692951)  2e-16  Click
8 1725106..1725351  prevent-host-death protein; ETAE_1621  N/A  Click
9 complement(1725690..1726202)  predicted transcriptional regulator; ETAE_1622  N/A  Click
10 complement(1726297..1726605)  PHAGE_Entero_N15: gp48; ETAE_1623; phage(gi9630515)  1e-08  Click
11 complement(1726595..1726726)  hypothetical protein; ETAE_1624  N/A  Click
12 1727399..1727992  hypothetical protein; ETAE_1625  N/A  Click
13 1728164..1728502  PHAGE_Salmon_1: bacteriophage lysis protein; holin; ETAE_1626; phage(gi169257181)  3e-26  Click
14 1728505..1729056  PHAGE_Erwini_vB_EamP_S6: endolysin; ETAE_1627; phage(gi422935930)  1e-65  Click
15 1729411..1730028  PHAGE_Escher_TL_2011c: putative antirepressor; ETAE_1628; phage(gi418487055)  2e-16  Click
16 1730888..1731004  hypothetical protein; ETAE_1629  N/A  Click
17 1731033..1731809  PHAGE_Escher_TL_2011c: putative terminase small subunit; ETAE_1630; phage(gi418487072)  1e-15  Click
18 1731787..1732500  PHAGE_Entero_Min27: putative large subunit terminase; ETAE_1631; phage(gi170783661)  1e-88  Click
19 complement(1732512..1732697)  hypothetical protein; ETAE_1632  N/A  Click
20 1732777..1733940  PHAGE_Burkho_DC1: multidomain (soluble lytic transglycosylase/helicase/methylase) protein; ETAE_1633; phage(gi401723087)  2e-59  Click
21 1734117..1734563  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp35; ETAE_1634; phage(gi116222027)  1e-19  Click
22 1734590..1735612  PROPHAGE_Escher_CFT073: transposase; ETAE_1635; phage(gi26248360)  0.0  Click
23 1735609..1736391  PROPHAGE_Escher_CFT073: transposase/IS protein; ETAE_1636; phage(gi26248359)  5e-139  Click
24 1736598..1741205  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp35; ETAE_1637; phage(gi116222027)  2e-138  Click
25 1741957..1742070  hypothetical protein; ETAE_1638  N/A  Click
26 1742286..1742843  PHAGE_Escher_TL_2011c: outer membrane protein Lom precursor; ETAE_1639; phage(gi418487075)  3e-15  Click
27 1742931..1743290  PHAGE_Salmon_1: hypothetical protein STM0906.1n.Fels1; ETAE_1640; phage(gi169257180)  1e-26  Click
28 complement(1743532..1744014)  putative Gifsy-1 prophage protein; ETAE_1641  N/A  Click
Region 2, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2594252..2594266  attL    TGCAGGGAACGCCAT  N/A  Click
2 2594426..2595583  PHAGE_Entero_HK633: integrase; ETAE_2465; phage(gi428782545)  1e-178  Click
3 complement(2595683..2596264)  PHAGE_Entero_HK106: tail fiber assembly protein; ETAE_2466; phage(gi428783304)  4e-36  Click
4 complement(2596267..2598423)  PHAGE_Salmon_1: putative bacteriophage tail fiber protein; Lambda gpN homolog; ETAE_2467; phage(gi169257204)  3e-73  Click
5 complement(2598480..2598620)  hypothetical protein; ETAE_2468  N/A  Click
6 2599259..2599396  hypothetical protein; ETAE_2469  N/A  Click
7 complement(2599536..2600198)  PHAGE_Escher_TL_2011c: outer membrane protein Lom precursor; ETAE_2470; phage(gi418487075)  4e-16  Click
8 complement(2600252..2601253)  PHAGE_Pectob_My1: hypothetical protein; ETAE_2471; phage(gi410491159)  1e-12  Click
9 complement(2601250..2604345)  PHAGE_Stx2_c_1717: putative tail fiber component J; ETAE_2472; phage(gi209447196)  0.0  Click
10 complement(2604404..2604628)  PHAGE_Entero_4795: putative tail component; ETAE_2473; phage(gi157166056)  3e-16  Click
11 2605093..2605230  hypothetical protein; ETAE_2474  N/A  Click
12 complement(2606388..2606531)  hypothetical protein; ETAE_2475  N/A  Click
13 complement(2606608..2607303)  PHAGE_Salmon_1: putative bacteriophage minor tail protein; Lambda gpL homolog; ETAE_2476; phage(gi169257199)  1e-81  Click
14 complement(2608105..2609997)  PHAGE_Gifsy_1: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; ETAE_2477; phage(gi169257221)  2e-39  Click
15 2610075..2611097  PROPHAGE_Escher_CFT073: transposase; ETAE_2478; phage(gi26248360)  0.0  Click
16 2611094..2611876  PROPHAGE_Escher_CFT073: transposase/IS protein; ETAE_2479; phage(gi26248359)  5e-139  Click
17 2612115..2612570  hypothetical protein; ETAE_2480  N/A  Click
18 2612572..2613045  PHAGE_Pectob_ZF40: putative methylase; ETAE_2481; phage(gi422936660)  2e-70  Click
19 2613049..2613720  PHAGE_Salmon_SPN3UB: putative Eaa protein; ETAE_2482; phage(gi423262432)  2e-23  Click
20 2613720..2613869  hypothetical protein; ETAE_2483  N/A  Click
21 2613862..2614467  PHAGE_Salmon_epsilon34: putative exodeoxyribonuclease VIII; ETAE_2484; phage(gi221328652)  3e-16  Click
22 2614744..2615547  PHAGE_Entero_mEp390: hypothetical protein; ETAE_2485; phage(gi428782698)  2e-82  Click
23 2615681..2615833  PHAGE_Entero_HK633: hypothetical protein; ETAE_2486; phage(gi428782548)  4e-18  Click
24 2615908..2615922  attR    TGCAGGGAACGCCAT  N/A  Click
25 complement(2616477..2619164)  PHAGE_Scotop_05: ORF1; ETAE_2487; phage(gi152994037)  2e-10  Click
Region 3, total : 18 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3602929..3603063  PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; ETAE_3411; phage(gi17546158)  8e-12  Click
2 3603397..3603409  attL    AGATCACAGGAGT  N/A  Click
3 3603440..3603553  hypothetical protein; ETAE_3412  N/A  Click
4 complement(3603641..3603757)  hypothetical protein; ETAE_3413  N/A  Click
5 complement(3604038..3606365)  PHAGE_Entero_P4: DNA primase; ETAE_3414; phage(gi9627512)  0.0  Click
6 complement(3606380..3606700)  PHAGE_Entero_P4: hypothetical protein P4p07; ETAE_3415; phage(gi9627513)  2e-50  Click
7 complement(3606697..3606930)  hypothetical protein; ETAE_3416  N/A  Click
8 complement(3606921..3607250)  PHAGE_Entero_P4: putative CI repressor; ETAE_3417; phage(gi9627516)  4e-35  Click
9 complement(3607466..3607687)  PHAGE_Entero_P4: transcriptional regulator; ETAE_3418; phage(gi9627517)  4e-26  Click
10 3607837..3607965  hypothetical protein; ETAE_3419  N/A  Click
11 3608285..3608596  PHAGE_Entero_P4: head size determination protein sid; ETAE_3420; phage(gi9627518)  2e-15  Click
12 complement(3608640..3609422)  PROPHAGE_Escher_CFT073: transposase/IS protein; ETAE_3421; phage(gi26248359)  5e-139  Click
13 complement(3609419..3610441)  PROPHAGE_Escher_CFT073: transposase; ETAE_3422; phage(gi26248360)  0.0  Click
14 3610634..3610996  PHAGE_Entero_P4: head size determination protein sid; ETAE_3423; phage(gi9627518)  2e-16  Click
15 3610996..3611235  PHAGE_Entero_P2: Ogr; ETAE_3424; phage(gi9630356)  2e-14  Click
16 3611208..3611825  PHAGE_Entero_P4: amber mutation-suppressing protein; ETAE_3425; phage(gi9627520)  3e-29  Click
17 3612225..3612863  hypothetical protein; ETAE_3426  N/A  Click
18 complement(3612982..3614007)  PHAGE_Salmon_ST160: regulatory protein; ETAE_3427; phage(gi318065923)  5e-76  Click
19 complement(3614030..3615196)  PROPHAGE_Escher_CFT073: putative prophage integrase; ETAE_3428; phage(gi26250313)  1e-168  Click
20 3615366..3615378  attR    AGATCACAGGAGT  N/A  Click