Definition | Edwardsiella tarda EIB202 chromosome, complete genome. |
---|---|
Accession | NC_013508 |
Length | 3,760,463 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 28 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1721332..1721592) | PHAGE_Salmon_1: putative transcriptional regulator (repressor); ETAE_1614; phage(gi169257171) | 9e-21 | Click |
2 | 1722129..1722344 | PHAGE_Salmon_ST160: Cro; ETAE_1615; phage(gi318065926) | 4e-11 | Click |
3 | 1722442..1722798 | hypothetical protein; ETAE_1616 | N/A | Click |
4 | 1722795..1723028 | hypothetical protein; ETAE_1617 | N/A | Click |
5 | 1723060..1723311 | hypothetical protein; ETAE_1618 | N/A | Click |
6 | 1723514..1724512 | PHAGE_Entero_mEp460: replication protein; ETAE_1619; phage(gi428782359) | 9e-25 | Click |
7 | 1724515..1724817 | PHAGE_Pseudo_F116: hypothetical protein F116p35; ETAE_1620; phage(gi56692951) | 2e-16 | Click |
8 | 1725106..1725351 | prevent-host-death protein; ETAE_1621 | N/A | Click |
9 | complement(1725690..1726202) | predicted transcriptional regulator; ETAE_1622 | N/A | Click |
10 | complement(1726297..1726605) | PHAGE_Entero_N15: gp48; ETAE_1623; phage(gi9630515) | 1e-08 | Click |
11 | complement(1726595..1726726) | hypothetical protein; ETAE_1624 | N/A | Click |
12 | 1727399..1727992 | hypothetical protein; ETAE_1625 | N/A | Click |
13 | 1728164..1728502 | PHAGE_Salmon_1: bacteriophage lysis protein; holin; ETAE_1626; phage(gi169257181) | 3e-26 | Click |
14 | 1728505..1729056 | PHAGE_Erwini_vB_EamP_S6: endolysin; ETAE_1627; phage(gi422935930) | 1e-65 | Click |
15 | 1729411..1730028 | PHAGE_Escher_TL_2011c: putative antirepressor; ETAE_1628; phage(gi418487055) | 2e-16 | Click |
16 | 1730888..1731004 | hypothetical protein; ETAE_1629 | N/A | Click |
17 | 1731033..1731809 | PHAGE_Escher_TL_2011c: putative terminase small subunit; ETAE_1630; phage(gi418487072) | 1e-15 | Click |
18 | 1731787..1732500 | PHAGE_Entero_Min27: putative large subunit terminase; ETAE_1631; phage(gi170783661) | 1e-88 | Click |
19 | complement(1732512..1732697) | hypothetical protein; ETAE_1632 | N/A | Click |
20 | 1732777..1733940 | PHAGE_Burkho_DC1: multidomain (soluble lytic transglycosylase/helicase/methylase) protein; ETAE_1633; phage(gi401723087) | 2e-59 | Click |
21 | 1734117..1734563 | PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp35; ETAE_1634; phage(gi116222027) | 1e-19 | Click |
22 | 1734590..1735612 | PROPHAGE_Escher_CFT073: transposase; ETAE_1635; phage(gi26248360) | 0.0 | Click |
23 | 1735609..1736391 | PROPHAGE_Escher_CFT073: transposase/IS protein; ETAE_1636; phage(gi26248359) | 5e-139 | Click |
24 | 1736598..1741205 | PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp35; ETAE_1637; phage(gi116222027) | 2e-138 | Click |
25 | 1741957..1742070 | hypothetical protein; ETAE_1638 | N/A | Click |
26 | 1742286..1742843 | PHAGE_Escher_TL_2011c: outer membrane protein Lom precursor; ETAE_1639; phage(gi418487075) | 3e-15 | Click |
27 | 1742931..1743290 | PHAGE_Salmon_1: hypothetical protein STM0906.1n.Fels1; ETAE_1640; phage(gi169257180) | 1e-26 | Click |
28 | complement(1743532..1744014) | putative Gifsy-1 prophage protein; ETAE_1641 | N/A | Click |
Region 2, total : 23 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2594252..2594266 | attL TGCAGGGAACGCCAT | N/A | Click |
2 | 2594426..2595583 | PHAGE_Entero_HK633: integrase; ETAE_2465; phage(gi428782545) | 1e-178 | Click |
3 | complement(2595683..2596264) | PHAGE_Entero_HK106: tail fiber assembly protein; ETAE_2466; phage(gi428783304) | 4e-36 | Click |
4 | complement(2596267..2598423) | PHAGE_Salmon_1: putative bacteriophage tail fiber protein; Lambda gpN homolog; ETAE_2467; phage(gi169257204) | 3e-73 | Click |
5 | complement(2598480..2598620) | hypothetical protein; ETAE_2468 | N/A | Click |
6 | 2599259..2599396 | hypothetical protein; ETAE_2469 | N/A | Click |
7 | complement(2599536..2600198) | PHAGE_Escher_TL_2011c: outer membrane protein Lom precursor; ETAE_2470; phage(gi418487075) | 4e-16 | Click |
8 | complement(2600252..2601253) | PHAGE_Pectob_My1: hypothetical protein; ETAE_2471; phage(gi410491159) | 1e-12 | Click |
9 | complement(2601250..2604345) | PHAGE_Stx2_c_1717: putative tail fiber component J; ETAE_2472; phage(gi209447196) | 0.0 | Click |
10 | complement(2604404..2604628) | PHAGE_Entero_4795: putative tail component; ETAE_2473; phage(gi157166056) | 3e-16 | Click |
11 | 2605093..2605230 | hypothetical protein; ETAE_2474 | N/A | Click |
12 | complement(2606388..2606531) | hypothetical protein; ETAE_2475 | N/A | Click |
13 | complement(2606608..2607303) | PHAGE_Salmon_1: putative bacteriophage minor tail protein; Lambda gpL homolog; ETAE_2476; phage(gi169257199) | 1e-81 | Click |
14 | complement(2608105..2609997) | PHAGE_Gifsy_1: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; ETAE_2477; phage(gi169257221) | 2e-39 | Click |
15 | 2610075..2611097 | PROPHAGE_Escher_CFT073: transposase; ETAE_2478; phage(gi26248360) | 0.0 | Click |
16 | 2611094..2611876 | PROPHAGE_Escher_CFT073: transposase/IS protein; ETAE_2479; phage(gi26248359) | 5e-139 | Click |
17 | 2612115..2612570 | hypothetical protein; ETAE_2480 | N/A | Click |
18 | 2612572..2613045 | PHAGE_Pectob_ZF40: putative methylase; ETAE_2481; phage(gi422936660) | 2e-70 | Click |
19 | 2613049..2613720 | PHAGE_Salmon_SPN3UB: putative Eaa protein; ETAE_2482; phage(gi423262432) | 2e-23 | Click |
20 | 2613720..2613869 | hypothetical protein; ETAE_2483 | N/A | Click |
21 | 2613862..2614467 | PHAGE_Salmon_epsilon34: putative exodeoxyribonuclease VIII; ETAE_2484; phage(gi221328652) | 3e-16 | Click |
22 | 2614744..2615547 | PHAGE_Entero_mEp390: hypothetical protein; ETAE_2485; phage(gi428782698) | 2e-82 | Click |
23 | 2615681..2615833 | PHAGE_Entero_HK633: hypothetical protein; ETAE_2486; phage(gi428782548) | 4e-18 | Click |
24 | 2615908..2615922 | attR TGCAGGGAACGCCAT | N/A | Click |
25 | complement(2616477..2619164) | PHAGE_Scotop_05: ORF1; ETAE_2487; phage(gi152994037) | 2e-10 | Click |
Region 3, total : 18 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3602929..3603063 | PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; ETAE_3411; phage(gi17546158) | 8e-12 | Click |
2 | 3603397..3603409 | attL AGATCACAGGAGT | N/A | Click |
3 | 3603440..3603553 | hypothetical protein; ETAE_3412 | N/A | Click |
4 | complement(3603641..3603757) | hypothetical protein; ETAE_3413 | N/A | Click |
5 | complement(3604038..3606365) | PHAGE_Entero_P4: DNA primase; ETAE_3414; phage(gi9627512) | 0.0 | Click |
6 | complement(3606380..3606700) | PHAGE_Entero_P4: hypothetical protein P4p07; ETAE_3415; phage(gi9627513) | 2e-50 | Click |
7 | complement(3606697..3606930) | hypothetical protein; ETAE_3416 | N/A | Click |
8 | complement(3606921..3607250) | PHAGE_Entero_P4: putative CI repressor; ETAE_3417; phage(gi9627516) | 4e-35 | Click |
9 | complement(3607466..3607687) | PHAGE_Entero_P4: transcriptional regulator; ETAE_3418; phage(gi9627517) | 4e-26 | Click |
10 | 3607837..3607965 | hypothetical protein; ETAE_3419 | N/A | Click |
11 | 3608285..3608596 | PHAGE_Entero_P4: head size determination protein sid; ETAE_3420; phage(gi9627518) | 2e-15 | Click |
12 | complement(3608640..3609422) | PROPHAGE_Escher_CFT073: transposase/IS protein; ETAE_3421; phage(gi26248359) | 5e-139 | Click |
13 | complement(3609419..3610441) | PROPHAGE_Escher_CFT073: transposase; ETAE_3422; phage(gi26248360) | 0.0 | Click |
14 | 3610634..3610996 | PHAGE_Entero_P4: head size determination protein sid; ETAE_3423; phage(gi9627518) | 2e-16 | Click |
15 | 3610996..3611235 | PHAGE_Entero_P2: Ogr; ETAE_3424; phage(gi9630356) | 2e-14 | Click |
16 | 3611208..3611825 | PHAGE_Entero_P4: amber mutation-suppressing protein; ETAE_3425; phage(gi9627520) | 3e-29 | Click |
17 | 3612225..3612863 | hypothetical protein; ETAE_3426 | N/A | Click |
18 | complement(3612982..3614007) | PHAGE_Salmon_ST160: regulatory protein; ETAE_3427; phage(gi318065923) | 5e-76 | Click |
19 | complement(3614030..3615196) | PROPHAGE_Escher_CFT073: putative prophage integrase; ETAE_3428; phage(gi26250313) | 1e-168 | Click |
20 | 3615366..3615378 | attR AGATCACAGGAGT | N/A | Click |