Definition | Nakamurella multipartita DSM 44233 chromosome, complete genome. |
---|---|
Accession | NC_013235 |
Length | 6,060,298 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 14 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1322412..1323158 | PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; Namu_1202; phage(gi16129761) | 1e-09 | Click |
2 | 1323155..1323607 | PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp13; Namu_1203; phage(gi48697203) | 2e-06 | Click |
3 | 1323604..1324668 | PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; Namu_1204; phage(gi16130960) | 8e-72 | Click |
4 | 1324805..1324816 | attL GTGTCGATGACC | N/A | Click |
5 | 1324811..1325254 | hypothetical protein; Namu_1205 | N/A | Click |
6 | 1325371..1325769 | hypothetical protein; Namu_1206 | N/A | Click |
7 | 1325975..1326274 | PHAGE_Bacill_36: GroES; Namu_1207; phage(gi156564025) | 8e-15 | Click |
8 | 1326457..1328088 | PHAGE_Halocy_JM_2012: chaperonin GroEL; Namu_1208; phage(gi389060206) | 1e-53 | Click |
9 | complement(1328394..1328678) | PHAGE_Mycoba_Ramsey: gp57; Namu_1209; phage(gi206600238) | 9e-10 | Click |
10 | 1329266..1329862 | LuxR family two component transcriptional regulator; Namu_1210 | N/A | Click |
11 | 1330059..1330667 | LuxR family transcriptional regulator; Namu_1211 | N/A | Click |
12 | 1330667..1331944 | PHAGE_Equid__1: envelope glycoprotein J; Namu_1212; phage(gi50313312) | 3e-14 | Click |
13 | 1332067..1333608 | PHAGE_Staphy_42E: ORF012; Namu_1213; phage(gi66395520) | 2e-31 | Click |
14 | complement(1336249..1336782) | PROPHAGE_Escher_CFT073: transposase/IS protein; Namu_1214; phage(gi26248359) | 2e-20 | Click |
15 | 1336595..1336606 | attR GTGTCGATGACC | N/A | Click |
16 | 1336864..1338045 | PHAGE_Lactoc_bIL310: integrase; Namu_1215; phage(gi13095863) | 6e-08 | Click |
Region 2, total : 18 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1383195..1383209 | attL GTCCCGGTTCGGGTC | N/A | Click |
2 | 1390299..1391309 | PHAGE_Papiin_2: envelope glycoprotein G; Namu_1267; phage(gi83722632) | 3e-07 | Click |
3 | 1391382..1392254 | hypothetical protein; Namu_1268 | N/A | Click |
4 | 1392320..1393780 | PHAGE_Mycoba_Gumball: gp62; Namu_1269; phage(gi206599766) | 7e-05 | Click |
5 | complement(1393796..1395577) | PHAGE_Papiin_2: large tegument protein; Namu_1270; phage(gi83722605) | 2e-06 | Click |
6 | 1395753..1396379 | PHAGE_Prochl_P_SSM7: PRGA-formyltransferase; Namu_1271; phage(gi326784531) | 8e-24 | Click |
7 | 1396376..1397947 | PHAGE_Prochl_P_SSM2: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase; Namu_1272; phage(gi61806062) | 1e-65 | Click |
8 | 1397990..1398610 | PHAGE_Entero_ST104: ORF19; Namu_1273; phage(gi46358666) | 1e-11 | Click |
9 | 1398745..1399455 | hypothetical protein; Namu_1274 | N/A | Click |
10 | 1399785..1400831 | transposase IS116/IS110/IS902 family protein; Namu_1275 | N/A | Click |
11 | complement(1400862..1401221) | PHAGE_Lymant_MNPV: mucin-like protein; Namu_1276; phage(gi292397678) | 5e-08 | Click |
12 | 1401289..1401924 | hypothetical protein; Namu_1277 | N/A | Click |
13 | 1401949..1402812 | methylenetetrahydrofolate dehydrogenase (NADP(+)); Namu_1278 | N/A | Click |
14 | 1402809..1403075 | hypothetical protein; Namu_1279 | N/A | Click |
15 | complement(1403086..1403547) | MarR family transcriptional regulator; Namu_1280 | N/A | Click |
16 | 1403749..1404963 | isocitrate dehydrogenase; Namu_1281 | N/A | Click |
17 | complement(1405093..1406493) | transposase IS116/IS110/IS902 family protein; Namu_1282 | N/A | Click |
18 | 1407968..1408561 | hypothetical protein; Namu_1284 | N/A | Click |
19 | 1408444..1408458 | attR GTCCCGGTTCGGGTC | N/A | Click |
20 | 1408673..1410154 | PROPHAGE_Xantho_306: ISxac2 transposase; Namu_1285; phage(gi21244662) | 2e-13 | Click |
Region 3, total : 19 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3819084..3819096 | attL CCGGCGGGCCGCC | N/A | Click |
2 | 3820047..3820059 | attL CTCGGTCAGGCTG | N/A | Click |
3 | complement(3827691..3829994) | PHAGE_Coryne_BFK20: gp15, minor tail protein; Namu_3481; phage(gi157168388) | 2e-32 | Click |
4 | 3830055..3830381 | PROPHAGE_Escher_Sakai: putative transposase; Namu_3482; phage(gi15832212) | 2e-18 | Click |
5 | 3830429..3831334 | PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; Namu_3483; phage(gi17975200) | 2e-85 | Click |
6 | complement(3831362..3832591) | PHAGE_Coryne_BFK20: gp15, minor tail protein; tail; phage length tape measure motif protein; Namu_3484(gi157168388) | 2e-53 | Click |
7 | complement(3832872..3834308) | PHAGE_Mycoba_LeBron: gp4; Namu_3485; phage(gi304360953) | 5e-40 | Click |
8 | complement(3834308..3834511) | hypothetical protein; Namu_3486 | N/A | Click |
9 | complement(3834789..3835682) | PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; Namu_3487; phage(gi17975200) | 1e-06 | Click |
10 | complement(3835877..3836221) | hypothetical protein; Namu_3488 | N/A | Click |
11 | complement(3836296..3836448) | hypothetical protein; Namu_3489 | N/A | Click |
12 | complement(3836455..3837171) | hypothetical protein; Namu_3490 | N/A | Click |
13 | complement(3837183..3837575) | excisionase family DNA binding domain-containing protein; Namu_3491 | N/A | Click |
14 | complement(3837572..3837856) | hypothetical protein; Namu_3492 | N/A | Click |
15 | complement(3838038..3838253) | hypothetical protein; Namu_3493 | N/A | Click |
16 | complement(3838250..3839464) | PHAGE_Coryne_BFK20: gp43, RepA like protein; Namu_3494; phage(gi157168416) | 4e-07 | Click |
17 | 3839725..3840000 | hypothetical protein; Namu_3495 | N/A | Click |
18 | 3840036..3840048 | attR CTCGGTCAGGCTG | N/A | Click |
19 | complement(3840041..3840235) | PHAGE_Mycoba_Che12: gp39; Namu_3496; phage(gi109392489) | 2e-06 | Click |
20 | complement(3840542..3841423) | PROPHAGE_Escher_CFT073: transposase insF; Namu_3497; phage(gi26250329) | 7e-33 | Click |
21 | complement(3841444..3841731) | PHAGE_Lactob_phiAT3: putative transposase A; Namu_3498; phage(gi48697273) | 2e-07 | Click |
22 | complement(3842275..3843381) | PHAGE_Mycoba_SWU1: integrase; Namu_3499; phage(gi388570553) | 1e-55 | Click |
23 | 3852652..3852664 | attR CCGGCGGGCCGCC | N/A | Click |