Definition | Jonesia denitrificans DSM 20603 chromosome, complete genome. |
---|---|
Accession | NC_013174 |
Length | 2,749,646 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 45 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2324653..2324664 | attL AAGGTTTTTGGG | N/A | Click |
2 | 2324963..2326150 | PHAGE_Mycoba_Che9d: gp50; Jden_2126; phage(gi29566457) | 1e-53 | Click |
3 | complement(2326197..2326688) | hypothetical protein; Jden_2127 | N/A | Click |
4 | complement(2326685..2327065) | hypothetical protein; Jden_2128 | N/A | Click |
5 | complement(2327074..2327502) | hypothetical protein; Jden_2129 | N/A | Click |
6 | 2327636..2327866 | hypothetical protein; Jden_2130 | N/A | Click |
7 | 2327945..2328211 | hypothetical protein; Jden_2131 | N/A | Click |
8 | 2328208..2328384 | hypothetical protein; Jden_2132 | N/A | Click |
9 | 2328491..2329225 | PHAGE_Lactob_Lj928: putative antirepressor; Jden_2133; phage(gi41179298) | 6e-62 | Click |
10 | 2329222..2329413 | hypothetical protein; Jden_2134 | N/A | Click |
11 | 2329423..2329518 | hypothetical protein; Jden_2135 | N/A | Click |
12 | 2329515..2330573 | PHAGE_Cafete_BV_PW1: hypothetical protein; Jden_2136; phage(gi310831380) | 1e-35 | Click |
13 | 2330570..2330701 | hypothetical protein; Jden_2137 | N/A | Click |
14 | 2330698..2330856 | hypothetical protein; Jden_2138 | N/A | Click |
15 | 2330843..2330944 | hypothetical protein; Jden_2139 | N/A | Click |
16 | 2330941..2331225 | hypothetical protein; Jden_2140 | N/A | Click |
17 | 2331215..2331892 | PHAGE_Rhodoc_REQ2: exonuclease; Jden_2141; phage(gi372449878) | 4e-60 | Click |
18 | 2331892..2332425 | PHAGE_Rhodoc_REQ2: hypothetical protein; Jden_2142; phage(gi372449879) | 7e-34 | Click |
19 | 2332422..2332634 | hypothetical protein; Jden_2143 | N/A | Click |
20 | 2332609..2332743 | hypothetical protein; Jden_2144 | N/A | Click |
21 | 2332740..2332991 | PHAGE_Mycoba_Porky: gp37; Jden_2145; phage(gi194303333) | 5e-12 | Click |
22 | 2332993..2333406 | PHAGE_Rhodoc_REQ3: single stranded DNA binding protein; Jden_2146; phage(gi372449997) | 1e-11 | Click |
23 | 2333524..2333877 | hypothetical protein; Jden_2147 | N/A | Click |
24 | 2333874..2334338 | PHAGE_Mycoba_Pipefish: gp58; Jden_2148; phage(gi109521898) | 8e-26 | Click |
25 | 2334328..2334723 | PHAGE_Strept_phiNJ2: putative endodeoxyribonuclease RusA; Jden_2149; phage(gi414090233) | 7e-13 | Click |
26 | 2334842..2335027 | hypothetical protein; Jden_2150 | N/A | Click |
27 | 2335024..2335389 | PHAGE_Mycoba_TM4: hypothetical protein TM4_gp49; Jden_2151; phage(gi18496934) | 2e-07 | Click |
28 | 2335386..2335637 | hypothetical protein; Jden_2152 | N/A | Click |
29 | 2335627..2336583 | PHAGE_Mycoba_Llij: gp69; Jden_2153; phage(gi109392255) | 4e-32 | Click |
30 | 2336580..2336939 | hypothetical protein; Jden_2154 | N/A | Click |
31 | 2336936..2338219 | PHAGE_Burkho_KS9: helicase gp45; Jden_2155; phage(gi255033728) | 1e-46 | Click |
32 | 2338216..2338419 | hypothetical protein; Jden_2156 | N/A | Click |
33 | 2338565..2338837 | hypothetical protein; Jden_2157 | N/A | Click |
34 | 2338834..2339115 | hypothetical protein; Jden_2158 | N/A | Click |
35 | 2339112..2339492 | PHAGE_Mycoba_Brujita: gp60; Jden_2159; phage(gi206599604) | 3e-23 | Click |
36 | 2339698..2340252 | hypothetical protein; Jden_2160 | N/A | Click |
37 | 2340565..2340867 | PHAGE_Strept_R4: putative HNH endonuclease; Jden_2161; phage(gi414089986) | 1e-13 | Click |
38 | 2340947..2341699 | PHAGE_Mycoba_Llij: gp100; Jden_2162; phage(gi109392286) | 1e-15 | Click |
39 | 2341943..2342512 | PHAGE_Strept_VWB: hypothetical protein VWBp30; Jden_2163; phage(gi41057246) | 8e-36 | Click |
40 | 2342561..2342929 | PHAGE_Mycoba_Faith1: gp2; Jden_2164; phage(gi338827014) | 4e-09 | Click |
41 | 2342913..2344694 | PHAGE_Strept_R4: putative terminase; Jden_2165; phage(gi414089990) | 9e-125 | Click |
42 | 2344691..2346025 | PHAGE_Strept_R4: putative portal; Jden_2166; phage(gi414089991) | 3e-54 | Click |
43 | 2346025..2346795 | PHAGE_Propio_PAS50: Gp4; Jden_2167; phage(gi330858355) | 8e-22 | Click |
44 | 2346872..2347399 | PHAGE_Rhodoc_REQ3: hypothetical protein; Jden_2168; phage(gi372450009) | 8e-05 | Click |
45 | 2347402..2348364 | PHAGE_Mycoba_TM4: major capsid subunit gp9; Jden_2169; phage(gi18496895) | 8e-41 | Click |
46 | 2348387..2348812 | PHAGE_Strept_R4: hypothetical protein; Jden_2170; phage(gi414089995) | 6e-05 | Click |
47 | 2350883..2350894 | attR AAGGTTTTTGGG | N/A | Click |
Region 2, total : 37 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(2457994..2458980) | PHAGE_Acanth_moumouvirus: NAD-dependent epimerase/dehydratase; Jden_2268; phage(gi441432391) | 6e-29 | Click |
2 | complement(2459063..2459401) | hypothetical protein; Jden_2269 | N/A | Click |
3 | 2459519..2459591 | tRNA | N/A | Click |
4 | 2459633..2459706 | tRNA | N/A | Click |
5 | 2459751..2459824 | tRNA | N/A | Click |
6 | 2459846..2459921 | tRNA | N/A | Click |
7 | complement(2460115..2460480) | hypothetical protein; Jden_2270 | N/A | Click |
8 | complement(2460491..2460916) | PHAGE_Lactob_Lj965: putative repressor; Jden_2271; phage(gi41179224) | 4e-05 | Click |
9 | 2461048..2461254 | transcriptional regulator, XRE family; Jden_2272 | N/A | Click |
10 | 2461339..2461605 | hypothetical protein; Jden_2273 | N/A | Click |
11 | 2461602..2461778 | hypothetical protein; Jden_2274 | N/A | Click |
12 | 2461885..2462655 | PHAGE_Lactob_Lrm1: antirepressor; Jden_2275; phage(gi195661228) | 3e-19 | Click |
13 | 2462652..2462855 | hypothetical protein; Jden_2276 | N/A | Click |
14 | 2462865..2462960 | hypothetical protein; Jden_2277 | N/A | Click |
15 | 2462957..2463976 | PHAGE_Cafete_BV_PW1: hypothetical protein; Jden_2278; phage(gi310831380) | 6e-24 | Click |
16 | 2463973..2464107 | hypothetical protein; Jden_2279 | N/A | Click |
17 | 2464202..2464483 | hypothetical protein; Jden_2280 | N/A | Click |
18 | 2464476..2465324 | PHAGE_Mycoba_Che9c: gp60; Jden_2281; phage(gi29566166) | 2e-25 | Click |
19 | 2465317..2465958 | PHAGE_Rhodoc_REQ3: Rect-like protein; Jden_2282; phage(gi372449982) | 3e-41 | Click |
20 | 2465955..2466167 | hypothetical protein; Jden_2283 | N/A | Click |
21 | 2466142..2466276 | hypothetical protein; Jden_2284 | N/A | Click |
22 | 2466273..2466524 | PHAGE_Mycoba_Porky: gp37; Jden_2285; phage(gi194303333) | 5e-12 | Click |
23 | 2466526..2466939 | PHAGE_Rhodoc_REQ3: single stranded DNA binding protein; Jden_2286; phage(gi372449997) | 1e-11 | Click |
24 | 2467057..2467410 | hypothetical protein; Jden_2287 | N/A | Click |
25 | 2467407..2467871 | PHAGE_Mycoba_Pipefish: gp58; Jden_2288; phage(gi109521898) | 8e-26 | Click |
26 | 2467861..2468256 | PHAGE_Strept_phiNJ2: putative endodeoxyribonuclease RusA; Jden_2289; phage(gi414090233) | 7e-13 | Click |
27 | 2468375..2468560 | hypothetical protein; Jden_2290 | N/A | Click |
28 | 2468557..2468922 | PHAGE_Mycoba_TM4: hypothetical protein TM4_gp49; Jden_2291; phage(gi18496934) | 2e-07 | Click |
29 | 2468919..2469170 | hypothetical protein; Jden_2292 | N/A | Click |
30 | 2469160..2470116 | PHAGE_Mycoba_Llij: gp69; Jden_2293; phage(gi109392255) | 4e-32 | Click |
31 | 2470113..2470472 | hypothetical protein; Jden_2294 | N/A | Click |
32 | 2470469..2471752 | PHAGE_Burkho_KS9: helicase gp45; Jden_2295; phage(gi255033728) | 1e-46 | Click |
33 | 2471749..2471952 | hypothetical protein; Jden_2296 | N/A | Click |
34 | 2472098..2472370 | hypothetical protein; Jden_2297 | N/A | Click |
35 | 2472367..2472648 | hypothetical protein; Jden_2298 | N/A | Click |
36 | 2472645..2473025 | PHAGE_Mycoba_Brujita: gp60; Jden_2299; phage(gi206599604) | 3e-23 | Click |
37 | 2473022..2473186 | hypothetical protein; Jden_2300 | N/A | Click |
38 | 2473183..2473386 | hypothetical protein; Jden_2301 | N/A | Click |
39 | 2473438..2473965 | hypothetical protein; Jden_2302 | N/A | Click |
40 | 2473962..2474144 | hypothetical protein; Jden_2303 | N/A | Click |
41 | 2474430..2474747 | PHAGE_Propio_P1.1: HNH endonuclease; Jden_2304; phage(gi410491407) | 6e-18 | Click |
Region 3, total : 29 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2468548..2468560 | attL AGGACTCTCATGA | N/A | Click |
2 | 2475125..2476549 | PHAGE_Propio_P104A: putative terminase large subunit; Jden_2306; phage(gi410491552) | 1e-111 | Click |
3 | 2476546..2477967 | PHAGE_Mycoba_BPs: portal protein; Jden_2307; phage(gi189043090) | 3e-45 | Click |
4 | 2477951..2478700 | PHAGE_Mycoba_Che9d: gp5; Jden_2308; phage(gi29566412) | 3e-17 | Click |
5 | 2478796..2479230 | PHAGE_Propio_P104A: putative head assembly scaffold; Jden_2309; phage(gi410491555) | 2e-11 | Click |
6 | 2479242..2480141 | PHAGE_Mycoba_BPs: capsid protein; Jden_2310; phage(gi189043094) | 1e-51 | Click |
7 | 2480141..2480320 | hypothetical protein; Jden_2311 | N/A | Click |
8 | 2480334..2480741 | hypothetical protein; Jden_2312 | N/A | Click |
9 | 2480743..2481078 | hypothetical protein; Jden_2313 | N/A | Click |
10 | 2481071..2481346 | hypothetical protein; Jden_2314 | N/A | Click |
11 | 2481339..2481686 | PHAGE_Strept_SM1: gp45; Jden_2315; phage(gi32469476) | 3e-06 | Click |
12 | 2481748..2482305 | PHAGE_Gordon_GTE2: main tail protein; Jden_2316; phage(gi338826868) | 7e-21 | Click |
13 | 2482410..2482691 | hypothetical protein; Jden_2317 | N/A | Click |
14 | 2482796..2483080 | PHAGE_Mycoba_BPs: potential virion protein; Jden_2318; phage(gi189043102) | 4e-08 | Click |
15 | complement(2483134..2483610) | hypothetical protein; Jden_2319 | N/A | Click |
16 | 2483652..2486030 | PHAGE_Microb_Min1: probable tape-measure protein; Jden_2320; phage(gi149882831) | 1e-63 | Click |
17 | 2486048..2488153 | PHAGE_Bacill_Andromeda: hypothetical protein; Jden_2321; phage(gi460042038) | 1e-14 | Click |
18 | 2488158..2490806 | hypothetical protein; Jden_2322 | N/A | Click |
19 | 2490849..2491652 | hypothetical protein; Jden_2323 | N/A | Click |
20 | 2491645..2492685 | PHAGE_Bacill_PBC1: hypothetical protein; Jden_2324; phage(gi389060341) | 2e-21 | Click |
21 | 2492686..2493294 | hypothetical protein; Jden_2325 | N/A | Click |
22 | 2493317..2493703 | hypothetical protein; Jden_2326 | N/A | Click |
23 | 2493700..2493984 | hypothetical protein; Jden_2327 | N/A | Click |
24 | 2494034..2494867 | PHAGE_Rhodoc_RRH1: putative lysin; Jden_2328; phage(gi372449805) | 3e-13 | Click |
25 | 2494879..2495094 | PHAGE_Lactoc_r1t: Holin; Jden_2329; phage(gi23455767) | 1e-05 | Click |
26 | 2495081..2495317 | hypothetical protein; Jden_2330 | N/A | Click |
27 | 2495304..2496452 | PHAGE_Propio_P104A: hypothetical protein; Jden_2331; phage(gi410491576) | 1e-08 | Click |
28 | complement(2496622..2497029) | hypothetical protein; Jden_2332 | N/A | Click |
29 | complement(2497085..2497330) | hypothetical protein; Jden_2333 | N/A | Click |
30 | complement(2497496..2498830) | PHAGE_Mycoba_Faith1: gp38; Jden_2334; phage(gi338827050) | 1e-44 | Click |
31 | 2503508..2503520 | attR AGGACTCTCATGA | N/A | Click |