Definition Chitinophaga pinensis DSM 2588, complete genome.
Accession NC_013132
Length 9,127,347
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 34 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4811338..4811349  attL    AGTGAATATGCC  N/A  Click
2 4811695..4812759  integrase family protein; Cpin_3827  N/A  Click
3 complement(4812740..4813015)  hypothetical protein; Cpin_3828  N/A  Click
4 complement(4813019..4813258)  hypothetical protein; Cpin_3829  N/A  Click
5 complement(4813323..4813580)  hypothetical protein; Cpin_3830  N/A  Click
6 complement(4813616..4814266)  PHAGE_Pseudo_F116: hypothetical protein F116p07; Cpin_3831; phage(gi56692934)  9e-32  Click
7 complement(4814967..4815245)  hypothetical protein; Cpin_3832  N/A  Click
8 complement(4815229..4815441)  hypothetical protein; Cpin_3833  N/A  Click
9 complement(4815658..4816326)  PHAGE_Cyanop_9515_10a: gp12; Cpin_3834; phage(gi372217724)  4e-52  Click
10 complement(4816323..4816583)  hypothetical protein; Cpin_3835  N/A  Click
11 complement(4816576..4816800)  hypothetical protein; Cpin_3836  N/A  Click
12 complement(4817087..4817278)  hypothetical protein; Cpin_3837  N/A  Click
13 complement(4817317..4817445)  hypothetical protein; Cpin_3838  N/A  Click
14 complement(4817457..4817687)  hypothetical protein; Cpin_3839  N/A  Click
15 complement(4817684..4817995)  hypothetical protein; Cpin_3840  N/A  Click
16 complement(4817992..4818177)  hypothetical protein; Cpin_3841  N/A  Click
17 complement(4818174..4818617)  PHAGE_Geobac_E2: hypothetical protein GBVE2_gp051; Cpin_3842; phage(gi148747778)  6e-10  Click
18 complement(4818652..4818930)  hypothetical protein; Cpin_3843  N/A  Click
19 complement(4818927..4819211)  hypothetical protein; Cpin_3844  N/A  Click
20 complement(4819201..4819623)  hypothetical protein; Cpin_3845  N/A  Click
21 complement(4819620..4819973)  hypothetical protein; Cpin_3846  N/A  Click
22 complement(4820017..4820745)  hypothetical protein; Cpin_3847  N/A  Click
23 complement(4820748..4821179)  PHAGE_Acinet_Bphi_B1251: hypothetical protein; Cpin_3848; phage(gi423261993)  2e-12  Click
24 complement(4821176..4821439)  PHAGE_Bacill_IEBH: prophage repressor; Cpin_3849; phage(gi197261591)  5e-06  Click
25 complement(4821436..4822191)  hypothetical protein; Cpin_3850  N/A  Click
26 complement(4822160..4823017)  PHAGE_Vibrio_VvAW1: hypothetical protein; Cpin_3851; phage(gi460042921)  1e-16  Click
27 complement(4823028..4823282)  PHAGE_Sulfit_pCB2047_A: hypothetical protein; Cpin_3852; phage(gi472341908)  1e-06  Click
28 complement(4823300..4823554)  hypothetical protein; Cpin_3853  N/A  Click
29 complement(4823582..4824022)  hypothetical protein; Cpin_3854  N/A  Click
30 complement(4824022..4824429)  hypothetical protein; Cpin_3855  N/A  Click
31 complement(4824454..4824855)  hypothetical protein; Cpin_3856  N/A  Click
32 complement(4824852..4825235)  PHAGE_Xantho_Xp15: hypothetical protein XPXV15_gp43; Cpin_3857; phage(gi66392087)  3e-24  Click
33 complement(4825232..4825870)  PHAGE_Strept_YMC_2011: hypothetical protein; Cpin_3858; phage(gi399498698)  2e-09  Click
34 complement(4825874..4826482)  PHAGE_Mycoba_Porky: gp68; Cpin_3859; phage(gi194303364)  8e-16  Click
35 complement(4826492..4827349)  PHAGE_Entero_ES18: gp53; Cpin_3860; phage(gi62362266)  1e-21  Click
36 4826727..4826738  attR    AGTGAATATGCC  N/A  Click
Region 2, total : 19 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4834894..4835538  PHAGE_Tetras_TJE1: hypothetical protein; Cpin_3878; phage(gi431810853)  1e-09  Click
2 4835528..4836943  PHAGE_Flavob_11b: terminase large subunit; Cpin_3879; phage(gi53793591)  3e-108  Click
3 4836928..4838367  PHAGE_Flavob_11b: phage portal protein; Cpin_3880; phage(gi53793592)  5e-32  Click
4 4838429..4839913  PHAGE_Mycoba_Ardmore: gp85; Cpin_3881; phage(gi291084943)  2e-107  Click
5 4839916..4840452  PHAGE_Escher_phAPEC8: hypothetical protein; Cpin_3882; phage(gi448260463)  6e-32  Click
6 4840449..4840832  PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; Cpin_3883; phage(gi399498797)  1e-17  Click
7 4840834..4841100  hypothetical protein; Cpin_3884  N/A  Click
8 4841097..4841273  hypothetical protein; Cpin_3885  N/A  Click
9 4841542..4841751  PHAGE_Entero_EcP1: hypothetical protein; Cpin_3886; phage(gi418489329)  2e-07  Click
10 4841878..4842219  hypothetical protein; Cpin_3887  N/A  Click
11 4842216..4842866  hypothetical protein; Cpin_3888  N/A  Click
12 4843080..4843454  hypothetical protein; Cpin_3889  N/A  Click
13 4843451..4844413  PHAGE_Flavob_11b: minor head protein; Cpin_3890; phage(gi53793594)  2e-12  Click
14 4844538..4845287  peptidase U35 phage prohead HK97; Cpin_3891  N/A  Click
15 4845292..4846557  PHAGE_Xantho_CP1: putative head protein; Cpin_3892; phage(gi431811003)  4e-36  Click
16 4846621..4846965  hypothetical protein; Cpin_3893  N/A  Click
17 4846969..4847499  hypothetical protein; Cpin_3894  N/A  Click
18 4847496..4847834  PHAGE_Geobac_E2: putative head-tail adaptor; Cpin_3895; phage(gi148747735)  2e-09  Click
19 4847834..4848319  PHAGE_Flavob_11b: hypothetical protein PHG11b_34; Cpin_3896; phage(gi53793610)  2e-09  Click