| Definition | Paenibacillus sp. JDR-2, complete genome. |
|---|---|
| Accession | NC_012914 |
| Length | 7,184,930 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 18 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1831555..1831947 | PHAGE_Bacill_SPO1: gp1.2; Pjdr2_1537; phage(gi209972874) | 4e-45 | Click |
| 2 | 1831944..1832258 | PHAGE_Clostr_phiMMP04: HNH endonuclease; Pjdr2_1538; phage(gi414090491) | 2e-21 | Click |
| 3 | 1832566..1832976 | PHAGE_Staphy_phi5967PVL: hypothetical protein; Pjdr2_1539; phage(gi431810268) | 3e-19 | Click |
| 4 | 1832973..1834685 | PHAGE_Clostr_phiMMP04: terminase; Pjdr2_1540; phage(gi414090443) | 7e-132 | Click |
| 5 | 1835107..1836342 | PHAGE_Clostr_phiMMP04: phage portal protein; Pjdr2_1541; phage(gi414090444) | 2e-74 | Click |
| 6 | 1836311..1836946 | PHAGE_Staphy_StB20: prohead protease; Pjdr2_1542; phage(gi431809768) | 4e-18 | Click |
| 7 | 1837012..1838193 | phage major capsid protein; Pjdr2_1543 | N/A | Click |
| 8 | 1838251..1838859 | hypothetical protein; Pjdr2_1544 | N/A | Click |
| 9 | 1838885..1839184 | phage protein (for DNA packaging); Pjdr2_1545 | N/A | Click |
| 10 | 1839181..1839492 | PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp23; Pjdr2_1546; phage(gi115334633) | 1e-11 | Click |
| 11 | 1839496..1839948 | phage protein, HK97 gp10 family; Pjdr2_1547 | N/A | Click |
| 12 | 1839956..1840336 | hypothetical protein; Pjdr2_1548 | N/A | Click |
| 13 | 1840349..1841056 | PHAGE_Entero_mEp237: major tail protein V; Pjdr2_1549; phage(gi435439277) | 6e-06 | Click |
| 14 | 1841108..1841458 | hypothetical protein; Pjdr2_1550 | N/A | Click |
| 15 | 1841512..1841793 | hypothetical protein; Pjdr2_1551 | N/A | Click |
| 16 | 1841844..1844450 | PHAGE_Clostr_phiCP26F: phage tail tape measure protein; Pjdr2_1552; phage(gi422933964) | 2e-37 | Click |
| 17 | 1844491..1844817 | PHAGE_Lactob_Lj965: hypothetical protein Ljo_0323; Pjdr2_1553; phage(gi41179261) | 1e-16 | Click |
| 18 | 1844827..1846401 | PHAGE_Entero_phiFL3A: PblB-like tail protein; Pjdr2_1554; phage(gi281416271) | 5e-08 | Click |
Region 2, total : 29 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1848261..1848275 | attL GATAGCACAACTACG | N/A | Click |
| 2 | complement(1861796..1862443) | PHAGE_Deep_s_D6E: transcriptional regulator; Pjdr2_1579; phage(gi423262353) | 1e-58 | Click |
| 3 | 1862619..1862831 | PHAGE_Deep_s_D6E: Cro-repressor; Pjdr2_1580; phage(gi423262354) | 2e-09 | Click |
| 4 | 1862864..1863493 | PHAGE_Bacill_BMBtp2: phage regulatory protein; Pjdr2_1581; phage(gi431809482) | 2e-35 | Click |
| 5 | 1863505..1863948 | hypothetical protein; Pjdr2_1582 | N/A | Click |
| 6 | 1864193..1864456 | hypothetical protein; Pjdr2_1583 | N/A | Click |
| 7 | 1864456..1865061 | hypothetical protein; Pjdr2_1584 | N/A | Click |
| 8 | 1865061..1866605 | PHAGE_Lister_B054: gp49; Pjdr2_1585; phage(gi157325333) | 1e-17 | Click |
| 9 | 1866602..1866847 | hypothetical protein; Pjdr2_1586 | N/A | Click |
| 10 | 1866837..1867736 | PHAGE_Lister_B054: gp50; Pjdr2_1587; phage(gi157325334) | 2e-08 | Click |
| 11 | 1867740..1868279 | PHAGE_Entero_HK629: HNH endonuclease; Pjdr2_1588; phage(gi428782073) | 2e-14 | Click |
| 12 | 1868267..1869022 | PHAGE_Lister_B054: gp51; Pjdr2_1589; phage(gi157325335) | 3e-18 | Click |
| 13 | 1869023..1869598 | hypothetical protein; Pjdr2_1590 | N/A | Click |
| 14 | 1869615..1870499 | PHAGE_Salmon_vB_SemP_Emek: DNA replication protein; Pjdr2_1591; phage(gi399498840) | 3e-07 | Click |
| 15 | 1870787..1872142 | PHAGE_Strept_1: putative DNA polymerase III delta prime subunit; Pjdr2_1593; phage(gi28876155) | 1e-103 | Click |
| 16 | 1872156..1872407 | hypothetical protein; Pjdr2_1594 | N/A | Click |
| 17 | 1872562..1872873 | PHAGE_Bacill_AP50: LexA-like protein; Pjdr2_1595; phage(gi211956452) | 2e-05 | Click |
| 18 | 1872873..1873445 | hypothetical protein; Pjdr2_1596 | N/A | Click |
| 19 | 1873902..1874132 | PHAGE_Bacill_phBC6A51: hypothetical protein BC1874; Pjdr2_1597; phage(gi31415768) | 5e-24 | Click |
| 20 | 1874136..1874708 | PHAGE_Bacill_phBC6A51: hypothetical protein BC1875; Pjdr2_1598; phage(gi31415769) | 2e-43 | Click |
| 21 | 1874705..1875202 | PHAGE_Deep_s_D6E: dUTPase; Pjdr2_1599; phage(gi423262368) | 4e-18 | Click |
| 22 | 1875205..1876881 | PHAGE_Pectob_ZF40: putative methylase; Pjdr2_1600; phage(gi422936661) | 3e-170 | Click |
| 23 | 1876886..1877041 | hypothetical protein; Pjdr2_1601 | N/A | Click |
| 24 | 1877054..1878130 | PHAGE_Salico_CGphi29: DNA methylase; Pjdr2_1602; phage(gi472340158) | 8e-78 | Click |
| 25 | 1878234..1878662 | hypothetical protein; Pjdr2_1603 | N/A | Click |
| 26 | 1878684..1879403 | PHAGE_Lister_B054: gp58; Pjdr2_1604; phage(gi157325342) | 1e-11 | Click |
| 27 | 1879548..1880168 | hypothetical protein; Pjdr2_1605 | N/A | Click |
| 28 | 1880249..1880737 | PHAGE_Staphy_SpaA1: sigma70, RNA polymerase sigma factor, positive control factor Xpf (C-terminal region); Pjdr2_1606; phage(gi399498918) | 2e-08 | Click |
| 29 | 1880753..1880989 | hypothetical protein; Pjdr2_1607 | N/A | Click |
| 30 | complement(1881028..1881102) | tRNA | N/A | Click |
| 31 | 1881221..1882903 | PHAGE_Deep_s_D6E: recombinase; Pjdr2_1608; phage(gi423262352) | 1e-15 | Click |
| 32 | 1891173..1891187 | attR GATAGCACAACTACG | N/A | Click |
Region 3, total : 21 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(5926465..5927250) | PHAGE_Clostr_phiSM101: autolytic lysozyme; Pjdr2_5161; phage(gi110804057) | 1e-36 | Click |
| 2 | complement(5927240..5927476) | hypothetical protein; Pjdr2_5162 | N/A | Click |
| 3 | complement(5927476..5927706) | PHAGE_Entero_phiFL4A: holin; Pjdr2_5163; phage(gi281416487) | 5e-06 | Click |
| 4 | complement(5927837..5929303) | PHAGE_Cyanop_NATL2A_133: hypothetical protein; Pjdr2_5164; phage(gi372217847) | 2e-16 | Click |
| 5 | complement(5929300..5929923) | PHAGE_Clostr_phiMMP04: hypothetical protein; Pjdr2_5165; phage(gi414090462) | 2e-19 | Click |
| 6 | complement(5929928..5930344) | PHAGE_Deep_s_D6E: tail fiber protein; Pjdr2_5166; phage(gi423262345) | 9e-07 | Click |
| 7 | complement(5930344..5931366) | PHAGE_Burkho_BcepNazgul: tail fiber protein; Pjdr2_5167; phage(gi34610150) | 5e-15 | Click |
| 8 | complement(5931371..5931766) | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; Pjdr2_5168 | N/A | Click |
| 9 | complement(5931769..5932830) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p25; Pjdr2_5169; phage(gi134287359) | 1e-56 | Click |
| 10 | complement(5932831..5933208) | PHAGE_Strept_1: hypothetical protein EJ-1p60; Pjdr2_5170; phage(gi39653734) | 8e-15 | Click |
| 11 | complement(5933205..5933459) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p23; Pjdr2_5171; phage(gi134287358) | 7e-08 | Click |
| 12 | complement(5933456..5934436) | PHAGE_Clostr_phiC2: putative hydrolase; Pjdr2_5172; phage(gi134287357) | 5e-47 | Click |
| 13 | complement(5934436..5935224) | PHAGE_Clostr_phiC2: putative LysM; Pjdr2_5173; phage(gi134287356) | 1e-11 | Click |
| 14 | complement(5935288..5937447) | PHAGE_Clostr_phiC2: putative tail tape measure protein; Pjdr2_5174; phage(gi134287355) | 2e-39 | Click |
| 15 | complement(5937642..5938049) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p16; Pjdr2_5175; phage(gi134287351) | 2e-10 | Click |
| 16 | complement(5938085..5938552) | PHAGE_Clostr_phiC2: putative core tail; Pjdr2_5176; phage(gi134287349) | 7e-33 | Click |
| 17 | complement(5938566..5939882) | PHAGE_Clostr_phiC2: putative sheath tail protein; Pjdr2_5177; phage(gi134287348) | 7e-76 | Click |
| 18 | complement(5939886..5940059) | hypothetical protein; Pjdr2_5178 | N/A | Click |
| 19 | complement(5940056..5940481) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p12; Pjdr2_5179; phage(gi134287347) | 1e-09 | Click |
| 20 | complement(5940799..5941422) | hypothetical protein; Pjdr2_5180 | N/A | Click |
| 21 | 5941813..5942130 | PHAGE_Staphy_EW: ORF047; Pjdr2_5181; phage(gi66395850) | 1e-09 | Click |