Definition Aggregatibacter aphrophilus NJ8700 chromosome, complete genome.
Accession NC_012913
Length 2,313,035
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 56 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 463523..463534  attL    AAAGTGCGGTGA  N/A  Click
2 complement(467873..469183)  PHAGE_Cafete_BV_PW1: putative 3'-5' exonuclease/tRNA(Ile) lysidine synthetase; NT05HA_0458; phage(gi310831050)  5e-06  Click
3 complement(469228..470085)  pyridoxamine kinase; NT05HA_0459  N/A  Click
4 complement(470148..471101)  acetyl-CoA carboxylase carboxyltransferase subunit alpha; NT05HA_0460  N/A  Click
5 complement(471669..472631)  PHAGE_Cronob_vB_CsaM_GAP32: hypothetical protein; NT05HA_0461; phage(gi414086941)  2e-51  Click
6 complement(473026..473241)  PHAGE_Haemop_HP1: hypothetical protein HP1p15; NT05HA_0462; phage(gi9628615)  1e-13  Click
7 473333..473476  hypothetical protein; NT05HA_0463  N/A  Click
8 complement(473724..473957)  PHAGE_Pasteu_F108: hypothetical protein F108p13; NT05HA_0464; phage(gi109302909)  2e-05  Click
9 complement(473959..474300)  hypothetical protein; NT05HA_0465  N/A  Click
10 complement(474358..475152)  PHAGE_Burkho_DC1: hypothetical protein; NT05HA_0466; phage(gi401723024)  3e-29  Click
11 complement(475221..475580)  PHAGE_Burkho_BcepMigl: hypothetical protein; NT05HA_0467; phage(gi431809867)  1e-09  Click
12 complement(475660..475806)  hypothetical protein; NT05HA_0468  N/A  Click
13 complement(476076..476687)  PHAGE_Marino_P12026: phage exonuclease; NT05HA_0469; phage(gi399528365)  8e-29  Click
14 complement(476684..477466)  PHAGE_Entero_4795: putative Bet protein; NT05HA_0470; phage(gi157165998)  2e-60  Click
15 complement(477473..478435)  PHAGE_Thalas_BA3: hypothetical protein BA3_0032; NT05HA_0471; phage(gi160700626)  5e-14  Click
16 complement(478438..478602)  hypothetical protein; NT05HA_0472  N/A  Click
17 complement(478580..478861)  PHAGE_Aggreg_S1249: hypothetical protein; NT05HA_0473; phage(gi273809599)  7e-11  Click
18 479764..480231  PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p09; NT05HA_0474; phage(gi31544007)  5e-55  Click
19 complement(480325..480537)  outer capsid spike VP4 protein; NT05HA_0475  N/A  Click
20 complement(480915..481334)  hypothetical protein; NT05HA_0476  N/A  Click
21 complement(481324..481797)  PHAGE_Entero_mEp234: HicB protein; NT05HA_0477; phage(gi428782291)  2e-21  Click
22 complement(482217..482912)  PHAGE_Haemop_Aaphi23: putative CI protein; NT05HA_0478; phage(gi31544010)  8e-79  Click
23 483031..483243  PHAGE_Mannhe_phiMHaA1: Cro repressor; NT05HA_0479; phage(gi109289971)  5e-14  Click
24 483292..483735  PHAGE_Entero_mEp390: hypothetical protein; NT05HA_0480; phage(gi428782704)  6e-17  Click
25 483787..484494  PHAGE_Aggreg_S1249: uncharacterized phage-encoded protein; NT05HA_0481; phage(gi273809589)  3e-133  Click
26 484491..485216  PHAGE_Aggreg_S1249: replication protein; NT05HA_0482; phage(gi273809588)  9e-108  Click
27 485213..485857  PHAGE_Aggreg_S1249: possible bacteriophage replication protein P; NT05HA_0483; phage(gi273809587)  3e-39  Click
28 485854..486372  PHAGE_Aggreg_S1249: DNA adenine methylase; NT05HA_0484; phage(gi273809586)  1e-79  Click
29 486342..486977  PHAGE_Entero_mEp237: hypothetical protein; NT05HA_0485; phage(gi435439315)  2e-19  Click
30 487152..487328  PHAGE_Pectob_ZF40: hypothetical protein; NT05HA_0486; phage(gi422936664)  6e-17  Click
31 487325..487687  PHAGE_Cronob_ENT47670: endodeoxyribonuclease RUS; NT05HA_0487; phage(gi431810529)  4e-16  Click
32 487680..488186  PHAGE_Escher_HK639: Q antitermination protein; NT05HA_0488; phage(gi356870666)  1e-19  Click
33 488350..488565  hypothetical protein; NT05HA_0489  N/A  Click
34 488577..489104  PHAGE_Mannhe_phiMHaA1: endolysin; NT05HA_0490; phage(gi109289945)  5e-40  Click
35 489056..489226  PHAGE_Aggreg_S1249: putative lytic protein Rz; NT05HA_0491; phage(gi273809574)  4e-06  Click
36 489371..489583  PHAGE_Aggreg_S1249: putative lytic protein Rz1; NT05HA_0492; phage(gi273809573)  4e-06  Click
37 490044..490508  PHAGE_Escher_HK75: terminase small subunit; NT05HA_0493; phage(gi356870678)  2e-19  Click
38 490508..492019  PHAGE_Entero_mEp390: terminase large subunit; NT05HA_0494; phage(gi428782666)  0.0  Click
39 492016..493254  PHAGE_Entero_mEp235: portal protein; NT05HA_0495; phage(gi428781813)  3e-82  Click
40 493244..493903  PHAGE_Salmon_ST64B: Pro-head protease; NT05HA_0496; phage(gi23505450)  6e-47  Click
41 493905..495098  PHAGE_Xantho_CP1: putative head protein; NT05HA_0497; phage(gi431811003)  7e-102  Click
42 495420..495782  PHAGE_Geobac_E2: putative head-tail adaptor; NT05HA_0498; phage(gi148747735)  1e-16  Click
43 495775..496257  PHAGE_Stx2_c_1717: hypothetical protein Stx2-1717_gp63; NT05HA_0499; phage(gi209447186)  2e-16  Click
44 496259..496603  hypothetical protein; NT05HA_0500  N/A  Click
45 496607..497263  hypothetical protein; NT05HA_0501  N/A  Click
46 497325..497732  hypothetical protein; NT05HA_0502  N/A  Click
47 497741..498001  hypothetical protein; NT05HA_0503  N/A  Click
48 498054..498509  PHAGE_Salmon_SSU5: putative lipoprotein; NT05HA_0504; phage(gi410491532)  4e-12  Click
49 498601..498792  hypothetical protein; NT05HA_0505  N/A  Click
50 498851..502183  PHAGE_Pseudo_MP22: putative tail component protein; NT05HA_0506; phage(gi157835013)  3e-64  Click
51 502199..502534  PHAGE_Stx2_c_1717: minor tail protein; NT05HA_0507; phage(gi209447191)  3e-15  Click
52 502534..503268  PHAGE_Salmon_1: putative bacteriophage minor tail protein; Lambda gpL homolog; NT05HA_0508; phage(gi169257199)  8e-62  Click
53 503271..504032  PHAGE_Entero_2008: putative tail component K-like protein; NT05HA_0509; phage(gi209427789)  1e-55  Click
54 504056..504577  PHAGE_Entero_mEp460: tail assembly protein; NT05HA_0510; phage(gi428782333)  1e-23  Click
55 508808..509698  hypothetical protein; NT05HA_0513  N/A  Click
56 509768..510061  hypothetical protein; NT05HA_0514  N/A  Click
57 complement(510414..511613)  PHAGE_Escher_TL_2011b: putative integrase; NT05HA_0516; phage(gi418487628)  5e-132  Click
58 511576..511713  integrase; NT05HA_0515  N/A  Click
59 516009..516020  attR    AAAGTGCGGTGA  N/A  Click
Region 2, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1022948..1023322  PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; NT05HA_1000; phage(gi17546156)  9e-05  Click
2 1023109..1023121  attL    TTATACAAACCTT  N/A  Click
3 1023355..1024125  PROPHAGE_Escher_MG1655: IS150 transposase B; NT05HA_1001; phage(gi16131429)  4e-66  Click
4 complement(1024217..1024723)  PHAGE_Clostr_phiMMP04: cell wall hydrolase; NT05HA_1002; phage(gi414090458)  1e-09  Click
5 complement(1024903..1025757)  PHAGE_Cafete_BV_PW1: putative bifunctional KDO 8-P synthase/dTDP-6-deoxy-L-hexose 3-O-methyltransferase; NT05HA_1003; phage(gi310831256)  1e-48  Click
6 complement(1025767..1026666)  protein-(glutamine-N5) methyltransferase; NT05HA_1004  N/A  Click
7 complement(1026914..1027186)  hypothetical protein; NT05HA_1005  N/A  Click
8 complement(1027231..1028313)  PHAGE_Pseudo_73: hypothetical protein ORF037; NT05HA_1006; phage(gi148912865)  1e-08  Click
9 complement(1028459..1028914)  PHAGE_Escher_TL_2011b: putative outer membrane lipoprotein; NT05HA_1007; phage(gi418487638)  1e-07  Click
10 1043659..1043671  attR    TTATACAAACCTT  N/A  Click
Region 3, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2249878..2249889  attL    TTATTAAATAGA  N/A  Click
2 2252868..2253260  PHAGE_Entero_P4: DNA primase; NT05HA_2309; phage(gi9627512)  2e-25  Click
3 2253253..2253972  PHAGE_Entero_P4: DNA primase; NT05HA_2310; phage(gi9627512)  6e-40  Click
4 complement(2254137..2254388)  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; NT05HA_2311; phage(gi16130540)  4e-11  Click
5 complement(2254385..2254906)  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; NT05HA_2312; phage(gi16130540)  4e-30  Click
6 complement(2255218..2256159)  PHAGE_Rhodob_RcapMu: major capsid protein; NT05HA_2313; phage(gi356870880)  3e-26  Click
7 complement(2256163..2256612)  PHAGE_Burkho_phiE255: gp6; NT05HA_2314; phage(gi134288810)  3e-05  Click
8 complement(2256622..2257191)  PHAGE_Cyanop_S_TIM5: virion structural protein; NT05HA_2315; phage(gi422936221)  3e-09  Click
9 complement(2257494..2259317)  PHAGE_Entero_P4: DNA primase; NT05HA_2316; phage(gi9627512)  3e-58  Click
10 complement(2259307..2259627)  hypothetical protein; NT05HA_2317  N/A  Click
11 complement(2259620..2260168)  PHAGE_Entero_N15: gp32; NT05HA_2318; phage(gi9630502)  7e-05  Click
12 complement(2260249..2260440)  excisionase family DNA binding domain-containing protein; NT05HA_2319  N/A  Click
13 2260558..2260569  attL    TTTTTAAAAACG  N/A  Click
14 complement(2260843..2261211)  PHAGE_Escher_D108: late gene transcriptional activator; NT05HA_2320; phage(gi281199664)  1e-13  Click
15 2261262..2261387  hypothetical protein; NT05HA_2321  N/A  Click
16 complement(2261686..2262927)  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; NT05HA_2322; phage(gi16130540)  3e-72  Click
17 complement(2263117..2263193)  tRNA  N/A  Click
18 complement(2263326..2265197)  PHAGE_Synech_S_CBS1: group2 RNA polymerase sigma factor; NT05HA_2324; phage(gi356870821)  7e-35  Click
19 complement(2265250..2267046)  PHAGE_Helico_phiHP33: DNA primase; NT05HA_2325; phage(gi371671350)  2e-43  Click
20 complement(2267169..2267384)  30S ribosomal protein S21; NT05HA_2326  N/A  Click
21 2267419..2267586  hypothetical protein; NT05HA_2327  N/A  Click
22 2267609..2268637  PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; NT05HA_2328; phage(gi16130960)  3e-147  Click
23 2268709..2268942  hypothetical protein; NT05HA_2329  N/A  Click
24 2268942..2269520  PHAGE_Entero_RB43: Tk thymidine kinase; NT05HA_2330; phage(gi66391595)  3e-54  Click
25 complement(2269705..2271720)  PHAGE_Clostr_st: putative NAD-dependent DNA ligase; NT05HA_2331; phage(gi80159718)  2e-96  Click
26 2271792..2271803  attR    TTTTTAAAAACG  N/A  Click
27 2273824..2273835  attR    TTATTAAATAGA  N/A  Click