Definition Dickeya dadantii Ech703 chromosome, complete genome.
Accession NC_012880
Length 4,679,450
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 32 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2469300..2470163)  PHAGE_Entero_PsP3: CI; Dd703_2082; phage(gi41057393)  2e-82  Click
2 2470626..2471135  PHAGE_Yersin_413C: gpB; Dd703_2083; phage(gi30065737)  6e-36  Click
3 2471206..2471412  hypothetical protein; Dd703_2084  N/A  Click
4 2471412..2471618  PHAGE_Yersin_413C: hypothetical protein L-413Cp36; Dd703_2085; phage(gi30065740)  2e-09  Click
5 2471746..2473938  PHAGE_Yersin_413C: gpA; Dd703_2086; phage(gi30065742)  2e-180  Click
6 2474037..2474258  hypothetical protein; Dd703_2087  N/A  Click
7 2474799..2475002  PHAGE_Yersin_413C: gpX; Dd703_2088; phage(gi30065711)  4e-22  Click
8 2475048..2475515  PHAGE_Yersin_413C: gpR; Dd703_2089; phage(gi30065716)  3e-35  Click
9 2475687..2476328  PHAGE_Yersin_413C: gpV; Dd703_2090; phage(gi30065718)  2e-76  Click
10 2476325..2476672  PHAGE_Yersin_413C: gpW; Dd703_2091; phage(gi30065719)  3e-35  Click
11 2476677..2477585  PHAGE_Yersin_413C: gpJ; Dd703_2092; phage(gi30065720)  9e-122  Click
12 2477578..2478189  PHAGE_Salmon_RE_2010: tail protein I; Dd703_2093; phage(gi418489712)  6e-70  Click
13 2478557..2479912  hypothetical protein; Dd703_2094  N/A  Click
14 2480119..2481462  major facilitator superfamily MFS_1; Dd703_2095  N/A  Click
15 complement(2481574..2482140)  Smr protein/MutS2; Dd703_2096  N/A  Click
16 2482562..2483113  PHAGE_Entero_HK97: tail fiber; Dd703_2097; phage(gi9634179)  2e-28  Click
17 2483113..2483727  PHAGE_Entero_HK106: tail fiber assembly protein; Dd703_2098; phage(gi428783304)  3e-35  Click
18 2483937..2485106  PHAGE_Yersin_413C: gpFI; Dd703_2099; phage(gi30065725)  2e-179  Click
19 2485121..2485639  PHAGE_Yersin_413C: FII; Dd703_2100; phage(gi30065726)  2e-68  Click
20 2485703..2485993  PHAGE_Yersin_413C: gpE; Dd703_2101; phage(gi30065727)  2e-28  Click
21 2485996..2486145  PHAGE_Yersin_413C: gpE+E'; Dd703_2102; phage(gi30065728)  2e-16  Click
22 2486138..2488351  PHAGE_Yersin_413C: gpT; Dd703_2103; phage(gi30065729)  3e-31  Click
23 2488365..2488859  PROPHAGE_Salmon_Ty2: putative phage tail protein; Dd703_2104; phage(gi29143763)  2e-41  Click
24 2488856..2490061  PHAGE_Yersin_413C: gpD; Dd703_2105; phage(gi30065731)  9e-70  Click
25 2490158..2490352  PHAGE_Yersin_413C: Ogr; Dd703_2106; phage(gi30065732)  5e-19  Click
26 2490854..2492707  PHAGE_Pseudo_MP1412: diguanylate-cyclase GGDEF domain; Dd703_2107; phage(gi399529005)  8e-05  Click
27 2492990..2494660  PHAGE_Burkho_KL1: tail tape measure; Dd703_2108; phage(gi399528734)  6e-06  Click
28 2495000..2495701  ThiJ/PfpI domain protein; Dd703_2109  N/A  Click
29 2496046..2496360  PHAGE_Yersin_413C: gpY; Dd703_2110; phage(gi30065712)  2e-28  Click
30 2496350..2496841  PHAGE_Yersin_413C: gpK; Dd703_2111; phage(gi30065713)  2e-65  Click
31 2496838..2497287  PHAGE_Yersin_413C: LysB; Dd703_2112; phage(gi30065715)  2e-08  Click
32 2497235..2497399  PHAGE_Entero_2: P2 LysC-like protein; Dd703_2113; phage(gi169936037)  2e-09  Click
Region 2, total : 40 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4420522..4420533  attL    TGTGGTTAATGA  N/A  Click
2 complement(4427508..4428470)  PHAGE_Ostreo_OlV5: 6-phosphofructokinase; Dd703_3812; phage(gi472341206)  3e-18  Click
3 complement(4428680..4429576)  ferrous iron efflux protein F; Dd703_3813  N/A  Click
4 complement(4429685..4430161)  PHAGE_Strept_R4: putative DNA binding protein, XRE family; Dd703_3814; phage(gi414090036)  3e-05  Click
5 4430411..4430866  NUDIX hydrolase; Dd703_3815  N/A  Click
6 complement(4430936..4432432)  PHAGE_Entero_2: P2 gpH-like protein; Dd703_3816; phage(gi169936030)  3e-77  Click
7 complement(4432696..4433322)  PHAGE_Entero_HK106: tail fiber assembly protein; Dd703_3817; phage(gi428783304)  7e-29  Click
8 complement(4433319..4434992)  PHAGE_Entero_2: P2 gpH-like protein; Dd703_3818; phage(gi169936030)  5e-78  Click
9 complement(4434989..4435597)  PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; Dd703_3819; phage(gi169936031)  3e-67  Click
10 complement(4435590..4436486)  PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; Dd703_3820; phage(gi169936032)  3e-88  Click
11 complement(4436473..4436841)  PHAGE_Entero_2: P2 gpW-like baseplate protein; Dd703_3821; phage(gi169936033)  9e-21  Click
12 complement(4436838..4437419)  PHAGE_Erwini_ENT90: baseplate assembly protein; Dd703_3822; phage(gi431810950)  8e-42  Click
13 complement(4437416..4438054)  PHAGE_Burkho_phiE202: gp39, phage virion morphogenesis protein; Dd703_3823; phage(gi134288746)  1e-20  Click
14 complement(4438051..4438509)  PHAGE_Ralsto_phiRSA1: tail completion protein-like protein; Dd703_3824; phage(gi145708090)  5e-18  Click
15 complement(4438623..4439060)  conserved hypothetical protein; exported protein; Dd703_3825  N/A  Click
16 complement(4439057..4439602)  PHAGE_Pasteu_F108: Lys; Dd703_3826; phage(gi109302925)  2e-34  Click
17 complement(4439586..4439888)  hypothetical protein; Dd703_3827  N/A  Click
18 complement(4439857..4440078)  PHAGE_Entero_2: P2 gpX-like tail protein; Dd703_3828; phage(gi169936043)  7e-11  Click
19 complement(4440078..4440569)  PHAGE_Burkho_2: gp50, phage head completion protein (GPL); Dd703_3829; phage(gi134288689)  1e-23  Click
20 complement(4440668..4441549)  PHAGE_Ralsto_phiRSA1: terminase; Dd703_3830; phage(gi145708083)  5e-37  Click
21 complement(4441592..4442647)  PHAGE_Pseudo_phiCTX: predicted major capsid protein; Dd703_3831; phage(gi17313222)  3e-83  Click
22 complement(4442673..4443512)  PHAGE_Entero_2: P2 gpO-like protein; Dd703_3832; phage(gi169936047)  2e-48  Click
23 4443671..4445398  PHAGE_Entero_2: P2 gpP-like protein; Dd703_3833; phage(gi169936048)  3e-138  Click
24 4445398..4446450  PHAGE_Entero_2: P2 gpQ-like protein; Dd703_3834; phage(gi169936049)  2e-99  Click
25 complement(4446899..4448011)  PHAGE_Clostr_phiCD27: putative phage DNA-binding protein; Dd703_3835; phage(gi209901309)  8e-33  Click
26 complement(4448025..4448618)  hypothetical protein; Dd703_3836  N/A  Click
27 complement(4448798..4450852)  PHAGE_Erwini_ENT90: replication protein A; Dd703_3837; phage(gi431810936)  7e-148  Click
28 complement(4450849..4452075)  PHAGE_Burkho_phiE125: putative PAPS reductase/sulfotransferase; Dd703_3838; phage(gi17975219)  9e-54  Click
29 complement(4452075..4453031)  PHAGE_Entero_2: DNA adenine methylase-like protein; Dd703_3839; phage(gi169936055)  2e-86  Click
30 complement(4453028..4453252)  PHAGE_Entero_2: P2 gpOrf82-like protein; Dd703_3840; phage(gi169936056)  1e-13  Click
31 complement(4453252..4453482)  PHAGE_Entero_2: hypothetical protein STM2732.Fels2; Dd703_3841; phage(gi169936057)  2e-05  Click
32 complement(4453554..4453883)  hypothetical protein; Dd703_3842  N/A  Click
33 complement(4453896..4454051)  hypothetical protein; Dd703_3843  N/A  Click
34 complement(4454165..4454371)  hypothetical protein; Dd703_3844  N/A  Click
35 complement(4454382..4454654)  PHAGE_Yersin_413C: Cox; Dd703_3845; phage(gi30065735)  3e-24  Click
36 4454780..4455247  hypothetical protein; Dd703_3846  N/A  Click
37 complement(4455216..4455431)  hypothetical protein; Dd703_3847  N/A  Click
38 4455773..4455784  attR    TGTGGTTAATGA  N/A  Click
39 4455952..4456935  PHAGE_Entero_2: P2 Int-like protein; Dd703_3848; phage(gi169936064)  2e-62  Click
40 complement(4457179..4457703)  stress resistance protein; Dd703_3849  N/A  Click
41 4457857..4458555  PHAGE_Feldma_virus: putative sensor histidine kinase; Dd703_3850; phage(gi197322366)  7e-09  Click
42 4458552..4459922  PHAGE_Ectoca_1: EsV-1-65; Dd703_3851; phage(gi13242537)  5e-10  Click