Definition Bartonella grahamii as4aup, complete genome.
Accession NC_012846
Length 2,341,328
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 50 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 417970..419079  PHAGE_Bordet_1: phage tail protein; Bgr_03170; phage(gi41179369)  3e-07  Click
2 419150..419812  PHAGE_Acinet_AP22: putative endolysin/autolysin; Bgr_03180; phage(gi388570824)  6e-30  Click
3 419809..420036  hypothetical protein; Bgr_03190  N/A  Click
4 420059..420193  hypothetical protein; Bgr_03200  N/A  Click
5 420165..420383  hypothetical membrane protein; Bgr_03210  N/A  Click
6 420408..421193  PHAGE_Burkho_phiE125: DNA adenine methylase; Bgr_03220; phage(gi17975188)  2e-35  Click
7 421258..421632  putative transcriptional regulator; Bgr_03230  N/A  Click
8 421864..421882  attL    AAGGTGGTCTAAAAGGTGG  N/A  Click
9 421937..423094  PHAGE_Sulfit_pCB2047_C: integrase; Bgr_03240; phage(gi472341771)  2e-71  Click
10 complement(423319..423543)  hypothetical membrane protein; Bgr_03260  N/A  Click
11 complement(423663..423890)  hypothetical protein; Bgr_03270  N/A  Click
12 complement(423887..424549)  PHAGE_Acinet_AP22: putative endolysin/autolysin; Bgr_03280; phage(gi388570824)  2e-32  Click
13 424709..425011  PHAGE_Burkho_2: gp7, putative addiction module killer protein; Bgr_03290; phage(gi134288691)  1e-15  Click
14 424998..425318  PHAGE_Burkho_2: gp6, putative addiction module antidote protein; Bgr_03300; phage(gi134288715)  2e-12  Click
15 complement(425403..426707)  PHAGE_Vibrio_VHML: tail protein; Bgr_03310; phage(gi27311213)  3e-35  Click
16 complement(426704..426928)  PHAGE_Vibrio_VHML: ORF45; Bgr_03320; phage(gi27311212)  2e-08  Click
17 complement(426925..427305)  PHAGE_Vibrio_VHML: ORF44; Bgr_03330; phage(gi27311211)  5e-21  Click
18 complement(427311..429443)  PHAGE_Haemop_Aaphi23: putative tail length tape measure protein; Bgr_03340; phage(gi31544043)  5e-21  Click
19 complement(429550..429837)  putative phage related protein; Bgr_03350  N/A  Click
20 complement(429840..430346)  PROPHAGE_Salmon_Ty2: major tail tube protein; Bgr_03360; phage(gi29143759)  1e-20  Click
21 complement(430346..431737)  PHAGE_Vibrio_VHML: major tail sheath protein; Bgr_03370; phage(gi27311206)  7e-63  Click
22 complement(433254..434366)  PROPHAGE_Salmon_Ty2: variable tail fiber protein; Bgr_03390; phage(gi29143754)  6e-27  Click
23 complement(434381..437524)  PHAGE_Staphy_JD007: adsorption-associated tail protein; Bgr_03400; phage(gi428783003)  4e-65  Click
24 complement(437526..438632)  phage protein; Bgr_03410  N/A  Click
25 complement(438632..439459)  PHAGE_Erwini_ENT90: baseplate assembly protein; Bgr_03420; phage(gi431810943)  1e-21  Click
26 complement(439456..439785)  PHAGE_Vibrio_VHML: baseplate wedge subunit; Bgr_03430; phage(gi27311199)  4e-26  Click
27 complement(439794..440483)  PHAGE_Vibrio_VHML: ORF30; Bgr_03440; phage(gi27311198)  8e-15  Click
28 complement(440464..441012)  hypothetical protein; Bgr_03450  N/A  Click
29 441089..441388  hypothetical protein; Bgr_03460  N/A  Click
30 441375..441647  hypothetical protein; Bgr_03470  N/A  Click
31 441686..442003  HicB family protein; Bgr_03480  N/A  Click
32 complement(442083..442247)  hypothetical protein; Bgr_03490  N/A  Click
33 complement(442358..443095)  PHAGE_Haemop_Aaphi23: putative antirepressor protein AntB; Bgr_03500; phage(gi31544013)  5e-40  Click
34 complement(443433..443786)  hypothetical protein; Bgr_03520  N/A  Click
35 complement(443788..444864)  PHAGE_Entero_01: major capsid protein; Bgr_03530; phage(gi38707831)  1e-24  Click
36 complement(444877..445260)  phage protein Gp19; Bgr_03540  N/A  Click
37 complement(445505..446569)  PHAGE_Burkho_phiE125: putative capsid assembly protein/protease; Bgr_03550; phage(gi17975166)  5e-44  Click
38 complement(446577..448121)  PHAGE_Vibrio_VHML: ORF23; Bgr_03560; phage(gi27311190)  4e-56  Click
39 complement(448121..448369)  PHAGE_Stenot_S1: putative peptidase b; Bgr_03570; phage(gi213163904)  5e-05  Click
40 complement(448373..450319)  PHAGE_Vibrio_VHML: ORF22; Bgr_03580; phage(gi27311189)  1e-75  Click
41 complement(450309..450878)  phage protein; Bgr_03590  N/A  Click
42 complement(451246..451791)  hypothetical protein; Bgr_03600  N/A  Click
43 complement(451834..452124)  hypothetical protein; Bgr_03610  N/A  Click
44 complement(452467..452862)  putative transcriptional regulator, CopG family; Bgr_03620  N/A  Click
45 complement(452859..453059)  PHAGE_Haemop_HP2: hypothetical protein HP2p13; Bgr_03630; phage(gi19289355)  3e-05  Click
46 complement(453127..453663)  hypothetical protein; Bgr_03640  N/A  Click
47 complement(453675..454115)  PHAGE_Salmon_E1: bacterial type single-stranded DNA-binding protein; Bgr_03650; phage(gi170676317)  8e-30  Click
48 454429..454620  hypothetical protein; Bgr_03660  N/A  Click
49 454687..455115  PHAGE_Yersin_PY54: hypothetical protein PY54p57; Bgr_03670; phage(gi33770566)  9e-13  Click
50 complement(455163..455345)  hypothetical protein; Bgr_03680  N/A  Click
51 complement(455438..456181)  PHAGE_Haemop_Aaphi23: putative antirepressor protein AntB; Bgr_03690; phage(gi31544013)  1e-44  Click
52 465249..465267  attR    AAGGTGGTCTAAAAGGTGG  N/A  Click
Region 2, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 907784..908062  PHAGE_Burkho_2: gp7, putative addiction module killer protein; Bgr_07520; phage(gi134288691)  8e-12  Click
2 908043..908363  PHAGE_Burkho_2: gp6, putative addiction module antidote protein; Bgr_07530; phage(gi134288715)  1e-11  Click
3 909300..909311  attL    AATGTGCAAAGC  N/A  Click
4 complement(909666..910709)  PHAGE_Azospi_Cd: integrase; Bgr_07570; phage(gi168495175)  8e-24  Click
5 complement(910716..910934)  hypothetical protein; Bgr_07580  N/A  Click
6 complement(911078..911620)  hypothetical protein; Bgr_07590  N/A  Click
7 complement(911636..912259)  PHAGE_Escher_TL_2011c: putative exonuclease; Bgr_07600; phage(gi418487057)  6e-21  Click
8 complement(912261..913088)  PHAGE_Entero_Min27: Bet protein; Bgr_07610; phage(gi170783624)  1e-35  Click
9 complement(913162..913731)  PHAGE_Strept_Sfi19: hypothetical protein Sfi19p28; Bgr_07620; phage(gi9632919)  2e-29  Click
10 complement(913737..914126)  PHAGE_Bacill_phiAGATE: putative hexapeptide repeat containing transferase like protein; Bgr_07630; phage(gi448260917)  7e-21  Click
11 complement(914123..914668)  PHAGE_Strept_Sfi19: hypothetical protein Sfi19p28; Bgr_07640; phage(gi9632919)  3e-34  Click
12 complement(914782..915162)  hypothetical protein; Bgr_07650  N/A  Click
13 complement(915384..915716)  PHAGE_Staphy_EW: ORF047; Bgr_07660; phage(gi66395850)  4e-05  Click
14 915830..916111  hypothetical protein; Bgr_07670  N/A  Click
15 916122..916709  PHAGE_Human__8: LANA; Bgr_07680; phage(gi139472804)  1e-13  Click
16 complement(917170..917793)  hypothetical protein; Bgr_07690  N/A  Click
17 917940..918326  PHAGE_Mycoba_Rosebush: gp9; Bgr_07700; phage(gi29566202)  3e-05  Click
18 918316..918681  PHAGE_Sulfit_pCB2047_C: hypothetical protein; Bgr_07710; phage(gi472341797)  5e-07  Click
19 918671..919813  PHAGE_Sulfit_pCB2047_C: hypothetical protein; Bgr_07720; phage(gi472341797)  2e-05  Click
20 920073..920402  hypothetical protein; Bgr_07730  N/A  Click
21 920389..920847  hypothetical membrane protein; Bgr_07740  N/A  Click
22 921184..921693  PHAGE_Escher_TL_2011c: putative antirepressor; Bgr_07760; phage(gi418487055)  5e-27  Click
23 921775..922215  PHAGE_Strept_phiNJ2: hypothetical protein; Bgr_07770; phage(gi414090251)  5e-21  Click
24 922493..923941  PHAGE_Strept_1: putative DNA polymerase III delta prime subunit; Bgr_07780; phage(gi28876155)  2e-76  Click
25 924030..924305  PHAGE_Abalon_virus: single-stranded DNA binding protein; Bgr_07790; phage(gi216906076)  5e-16  Click
26 complement(925789..926568)  PHAGE_Strept_Sfi19: hypothetical protein Sfi19p28; Bgr_07800; phage(gi9632919)  4e-29  Click
27 complement(926660..927214)  PHAGE_Strept_Sfi19: hypothetical protein Sfi19p28; Bgr_07810; phage(gi9632919)  4e-29  Click
28 complement(927300..928070)  PHAGE_Strept_Sfi19: hypothetical protein Sfi19p28; Bgr_07820; phage(gi9632919)  7e-27  Click
29 complement(929570..934480)  PHAGE_Africa_virus: helicase; Bgr_07840; phage(gi9628148)  1e-15  Click
30 935300..935311  attR    AATGTGCAAAGC  N/A  Click
Region 3, total : 71 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1005219..1005230  attL    TAAAATCCTTTC  N/A  Click
2 complement(1005412..1006578)  PHAGE_Sulfit_pCB2047_C: integrase; Bgr_08410; phage(gi472341771)  3e-75  Click
3 1006803..1007228  hypothetical protein; Bgr_08420  N/A  Click
4 1007230..1008159  PHAGE_Pseudo_UFV_P2: phage particle protein; Bgr_08430; phage(gi410491834)  2e-10  Click
5 1008193..1009593  PHAGE_Brucel_Tb: putative peptidoglycan hydrolase; Bgr_08440; phage(gi418487710)  3e-08  Click
6 1009595..1011781  hypothetical protein; Bgr_08450  N/A  Click
7 1011798..1012463  PHAGE_Caulob_CcrColossus: putative tail tape measure protein; Bgr_08460; phage(gi414088174)  4e-11  Click
8 1012476..1013477  PHAGE_Bdello_phi1402: phage tail collar protein; Bgr_08470; phage(gi338826948)  7e-19  Click
9 1013486..1014499  PHAGE_Ralsto_phiRSA1: phage tail collar protein; Bgr_08480; phage(gi145708098)  1e-14  Click
10 1014507..1015634  PHAGE_Ralsto_phiRSA1: phage tail collar protein; Bgr_08490; phage(gi145708098)  1e-16  Click
11 1015644..1015877  hypothetical protein; Bgr_08500  N/A  Click
12 1015899..1020011  PHAGE_Pectob_My1: YadA domain-containing protein; Bgr_08510; phage(gi410491156)  3e-54  Click
13 1020021..1020350  hypothetical protein; Bgr_08520  N/A  Click
14 1020414..1021076  PHAGE_Acinet_AP22: putative endolysin/autolysin; Bgr_08530; phage(gi388570824)  1e-29  Click
15 1021103..1021300  hypothetical protein; Bgr_08540  N/A  Click
16 1021323..1021457  hypothetical protein; Bgr_08550  N/A  Click
17 1021429..1021647  hypothetical membrane protein; Bgr_08560  N/A  Click
18 1021672..1022487  PHAGE_Burkho_phiE125: DNA adenine methylase; Bgr_08570; phage(gi17975188)  8e-34  Click
19 1022497..1022508  attL    TAAAGAAATATT  N/A  Click
20 1022514..1022711  hypothetical protein; Bgr_08580  N/A  Click
21 1022734..1022868  hypothetical protein; Bgr_08590  N/A  Click
22 1022840..1023058  hypothetical membrane protein; Bgr_08600  N/A  Click
23 1023083..1023868  PHAGE_Burkho_phiE125: DNA adenine methylase; Bgr_08610; phage(gi17975188)  2e-35  Click
24 1024186..1025337  PHAGE_Sulfit_pCB2047_C: integrase; Bgr_08620; phage(gi472341771)  6e-71  Click
25 complement(1025512..1025748)  hypothetical membrane protein; Bgr_08630  N/A  Click
26 complement(1025856..1026083)  hypothetical protein; Bgr_08640  N/A  Click
27 complement(1026080..1026742)  PHAGE_Acinet_AP22: putative endolysin/autolysin; Bgr_08650; phage(gi388570824)  8e-33  Click
28 1026925..1027248  PHAGE_Burkho_2: gp7, putative addiction module killer protein; Bgr_08660; phage(gi134288691)  4e-15  Click
29 1027261..1027572  PHAGE_Burkho_2: gp6, putative addiction module antidote protein; Bgr_08670; phage(gi134288715)  3e-05  Click
30 complement(1027618..1027896)  hypothetical protein; Bgr_08680  N/A  Click
31 complement(1027893..1028654)  PHAGE_Haemop_Aaphi23: putative antirepressor protein AntB; Bgr_08690; phage(gi31544013)  4e-18  Click
32 complement(1028647..1028850)  transcriptional repressor Arc; Bgr_08700  N/A  Click
33 1028926..1029150  transcriptional repressor Arc; Bgr_08710  N/A  Click
34 complement(1029127..1029546)  PHAGE_Stx2_c_II: putative antirepressor protein AntB; Bgr_08720; phage(gi302393111)  4e-28  Click
35 complement(1029850..1031166)  PHAGE_Vibrio_VHML: tail protein; Bgr_08740; phage(gi27311213)  4e-35  Click
36 complement(1031163..1031387)  PHAGE_Vibrio_VHML: ORF45; Bgr_08750; phage(gi27311212)  3e-09  Click
37 complement(1031384..1031764)  PHAGE_Vibrio_VHML: ORF44; Bgr_08760; phage(gi27311211)  2e-21  Click
38 complement(1031770..1034067)  PHAGE_Haemop_Aaphi23: putative tail length tape measure protein; Bgr_08770; phage(gi31544043)  8e-20  Click
39 complement(1034174..1034461)  putative phage related protein; Bgr_08780  N/A  Click
40 complement(1034464..1034970)  PROPHAGE_Salmon_Ty2: major tail tube protein; Bgr_08790; phage(gi29143759)  1e-20  Click
41 complement(1034970..1036181)  PHAGE_Vibrio_VHML: major tail sheath protein; Bgr_08800; phage(gi27311206)  2e-103  Click
42 1036538..1037128  PHAGE_Haemop_Aaphi23: putative antirepressor protein AntB; Bgr_08820; phage(gi31544013)  2e-30  Click
43 1037351..1037602  putative prevent-host-death protein; Bgr_08830  N/A  Click
44 complement(1037678..1037986)  PHAGE_Azospi_Cd: Helix-turn-helix motif; Bgr_08840; phage(gi168495160)  6e-10  Click
45 complement(1037997..1038275)  plasmid maintenance system killer protein; Bgr_08850  N/A  Click
46 complement(1038685..1038930)  phage related protein; Bgr_08860  N/A  Click
47 complement(1038940..1040295)  PHAGE_Human__4: EBNA-1; Bgr_08870; phage(gi82503233)  2e-28  Click
48 complement(1040310..1043453)  PHAGE_Staphy_JD007: adsorption-associated tail protein; Bgr_08880; phage(gi428783003)  5e-65  Click
49 complement(1043455..1044561)  phage protein; Bgr_08890  N/A  Click
50 complement(1044561..1045388)  PHAGE_Erwini_ENT90: baseplate assembly protein; Bgr_08900; phage(gi431810943)  1e-20  Click
51 complement(1045385..1045714)  PHAGE_Vibrio_VHML: baseplate wedge subunit; Bgr_08910; phage(gi27311199)  1e-26  Click
52 complement(1045723..1046412)  PHAGE_Vibrio_VHML: ORF30; Bgr_08920; phage(gi27311198)  8e-15  Click
53 complement(1046393..1046941)  hypothetical protein; Bgr_08930  N/A  Click
54 1047018..1047317  hypothetical protein; Bgr_08940  N/A  Click
55 1047304..1047576  hypothetical protein; Bgr_08950  N/A  Click
56 1047615..1047932  HicB family protein; Bgr_08960  N/A  Click
57 complement(1048011..1048175)  hypothetical protein; Bgr_08970  N/A  Click
58 complement(1048286..1049017)  PHAGE_Haemop_Aaphi23: putative antirepressor protein AntB; Bgr_08980; phage(gi31544013)  4e-48  Click
59 complement(1049437..1050333)  PHAGE_Strept_Sfi19: hypothetical protein Sfi19p28; Bgr_09000; phage(gi9632919)  5e-31  Click
60 complement(1050364..1050717)  hypothetical protein; Bgr_09010  N/A  Click
61 complement(1050719..1051795)  PHAGE_Entero_01: major capsid protein; Bgr_09020; phage(gi38707831)  1e-24  Click
62 complement(1051808..1052203)  phage protein Gp19; Bgr_09030  N/A  Click
63 complement(1052436..1053491)  PHAGE_Burkho_phiE125: putative capsid assembly protein/protease; Bgr_09040; phage(gi17975166)  9e-44  Click
64 complement(1053499..1055043)  PHAGE_Vibrio_VHML: ORF23; Bgr_09050; phage(gi27311190)  4e-56  Click
65 complement(1055043..1055291)  PHAGE_Stenot_S1: putative peptidase b; Bgr_09060; phage(gi213163904)  5e-05  Click
66 complement(1055295..1057241)  PHAGE_Vibrio_VHML: ORF22; Bgr_09070; phage(gi27311189)  1e-75  Click
67 complement(1057231..1057800)  phage protein; Bgr_09080  N/A  Click
68 complement(1058168..1058713)  hypothetical protein; Bgr_09090  N/A  Click
69 complement(1058756..1059070)  hypothetical protein; Bgr_09100  N/A  Click
70 1059420..1059602  YcfA family protein; Bgr_09110  N/A  Click
71 1059623..1060045  PHAGE_Yersin_PY54: hypothetical protein PY54p57; Bgr_09120; phage(gi33770566)  9e-18  Click
72 complement(1060049..1060591)  hypothetical protein; Bgr_09130  N/A  Click
73 complement(1060603..1061058)  PHAGE_Salmon_E1: bacterial type single-stranded DNA-binding protein; Bgr_09140; phage(gi170676317)  2e-30  Click
74 1072874..1072885  attR    TAAAGAAATATT  N/A  Click
75 1073529..1073540  attR    TAAAATCCTTTC  N/A  Click
Region 4, total : 24 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1110764..1110775  attL    TATTCTTTTTTA  N/A  Click
2 1123117..1123578  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; Bgr_09750; phage(gi428782751)  7e-11  Click
3 1123575..1123829  PHAGE_Burkho_phi52237: putative bacteriophage tail protein X; Bgr_09760; phage(gi117676338)  5e-05  Click
4 1123820..1124851  PHAGE_Burkho_phi52237: bacteriophage late control gene D protein; Bgr_09770; phage(gi72537694)  2e-32  Click
5 1124823..1126268  PHAGE_Strept_1: putative DNA polymerase III delta prime subunit; Bgr_09780; phage(gi28876155)  2e-76  Click
6 1126666..1126947  proteic killer suppression protein; Bgr_09790  N/A  Click
7 1126963..1127262  PHAGE_Aeromo_Aes012: putative XRE family plasmid maintenance system antidote protein; Bgr_09800; phage(gi472438177)  1e-09  Click
8 complement(1127300..1128337)  PHAGE_Azospi_Cd: integrase; Bgr_09810; phage(gi168495175)  2e-22  Click
9 complement(1128340..1128588)  hypothetical protein; Bgr_09820  N/A  Click
10 complement(1128664..1129119)  PHAGE_Strept_phiNJ2: hypothetical protein; Bgr_09830; phage(gi414090251)  5e-22  Click
11 complement(1129116..1129661)  PHAGE_Strept_Sfi19: hypothetical protein Sfi19p28; Bgr_09840; phage(gi9632919)  6e-36  Click
12 complement(1129794..1130282)  hypothetical protein; Bgr_09850  N/A  Click
13 complement(1130350..1130973)  PHAGE_Escher_TL_2011c: putative exonuclease; Bgr_09860; phage(gi418487057)  2e-21  Click
14 complement(1130975..1131106)  putative phage recombination protein; Bgr_09870  N/A  Click
15 complement(1131067..1131768)  PHAGE_Pseudo_D3: Orf52; Bgr_09880; phage(gi9635643)  1e-18  Click
16 complement(1131908..1132666)  PHAGE_Haemop_Aaphi23: putative antirepressor protein AntB; Bgr_09890; phage(gi31544013)  1e-43  Click
17 complement(1132731..1133105)  hypothetical protein; Bgr_09900  N/A  Click
18 complement(1133264..1133881)  PHAGE_Pseudo_PAJU2: putative repressor cI; Bgr_09910; phage(gi209552478)  3e-08  Click
19 1133991..1134242  putative transcriptional regulator; Bgr_09920  N/A  Click
20 1134370..1135500  PHAGE_Sulfit_pCB2047_C: hypothetical protein; Bgr_09930; phage(gi472341797)  7e-13  Click
21 1135484..1135870  hypothetical protein; Bgr_09940  N/A  Click
22 1136053..1136400  hypothetical protein; Bgr_09950  N/A  Click
23 1136803..1136814  attR    TATTCTTTTTTA  N/A  Click
24 complement(1137032..1137337)  PHAGE_Burkho_phi52237: hypothetical protein BPSphi5223_0048; Bgr_09970; phage(gi117676336)  1e-06  Click
25 complement(1137315..1137614)  hypothetical protein; Bgr_09980  N/A  Click
26 1137823..1138251  PHAGE_Vibrio_VvAW1: single-stranded DNA-binding protein; Bgr_09990; phage(gi460042909)  3e-30  Click