Definition Variovorax paradoxus S110 chromosome chromosome 1, complete sequence.
Accession NC_012791
Length 5,626,353
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2603132..2603551)  PHAGE_Burkho_BcepC6B: putative prophage repressor protein; Vapar_2451; phage(gi48697234)  1e-08  Click
2 2603697..2603942  hypothetical protein; Vapar_2452  N/A  Click
3 2604119..2604601  hypothetical protein; Vapar_2453  N/A  Click
4 2604601..2605317  hypothetical protein; Vapar_2454  N/A  Click
5 2605314..2605559  hypothetical protein; Vapar_2455  N/A  Click
6 2605559..2605843  AsnC family transcriptional regulator; Vapar_2456  N/A  Click
7 2605840..2606697  PHAGE_Burkho_BcepMigl: replication protein; Vapar_2457; phage(gi431809879)  1e-19  Click
8 2606690..2607256  hypothetical protein; Vapar_2458  N/A  Click
9 2607256..2607648  hypothetical protein; Vapar_2459  N/A  Click
10 2607645..2608049  hypothetical protein; Vapar_2460  N/A  Click
11 2608046..2608339  PHAGE_Mycoba_Brujita: gp56; Vapar_2461; phage(gi206599600)  1e-22  Click
12 2608336..2608530  hypothetical protein; Vapar_2462  N/A  Click
13 2608527..2608862  PHAGE_Burkho_BcepMigl: hypothetical protein; Vapar_2463; phage(gi431809876)  4e-23  Click
14 2608868..2609311  PHAGE_Escher_TL_2011c: hypothetical protein; Vapar_2464; phage(gi418487093)  3e-06  Click
15 2609308..2609802  PHAGE_Burkho_Bcep176: gp5; Vapar_2465; phage(gi77864630)  1e-14  Click
16 2609799..2610023  PHAGE_Deftia_14: hypothetical protein; Vapar_2466; phage(gi282599121)  5e-12  Click
17 2610020..2610244  hypothetical protein; Vapar_2467  N/A  Click
18 2610223..2610321  hypothetical protein; Vapar_2468  N/A  Click
19 2610321..2611046  hypothetical protein; Vapar_2469  N/A  Click
20 2611729..2611804  tRNA  N/A  Click
21 2612594..2613085  PHAGE_Entero_mEp235: terminase small subunit; Vapar_2470; phage(gi428781811)  2e-29  Click
Region 2, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2613111..2614763  PHAGE_Tetras_SI1: terminase; Vapar_2471; phage(gi472342258)  3e-94  Click
2 2614754..2616382  PHAGE_Entero_phiP27: putative portal protein; Vapar_2472; phage(gi18249902)  8e-38  Click
3 2616379..2617062  PHAGE_Entero_mEp213: head maturation protease; Vapar_2473; phage(gi428782594)  2e-42  Click
4 2617139..2618590  PHAGE_Azospi_Cd: Phage major capsid protein; Vapar_2474; phage(gi168495136)  2e-12  Click
5 2618642..2619094  hypothetical protein; Vapar_2475  N/A  Click
6 2619112..2619378  hypothetical protein; Vapar_2476  N/A  Click
7 2619383..2620051  hypothetical protein; Vapar_2477  N/A  Click
8 2620087..2620425  head-tail adaptor protein; Vapar_2478  N/A  Click
9 2620418..2620957  PHAGE_Entero_HK97: Gp10; Vapar_2479; phage(gi9634169)  5e-11  Click
10 2620954..2621319  PHAGE_Escher_HK75: hypothetical protein; Vapar_2480; phage(gi356870686)  8e-09  Click
11 2621404..2622054  PHAGE_Burkho_phiE125: putative major tail subunit protein; Vapar_2481; phage(gi17975173)  1e-11  Click
12 2622056..2622283  hypothetical protein; Vapar_2482  N/A  Click
13 2622280..2622642  hypothetical protein; Vapar_2483  N/A  Click
14 2622657..2622923  hypothetical protein; Vapar_2484  N/A  Click
15 2622923..2625478  PHAGE_Pseudo_MP38: putative tail component protein; Vapar_2485; phage(gi215479964)  6e-21  Click
16 2625475..2626407  hypothetical protein; Vapar_2486  N/A  Click
17 2626404..2627282  PHAGE_Tetras_SI1: hypothetical protein; Vapar_2487; phage(gi472342235)  1e-24  Click
18 2627279..2627719  PHAGE_Caulob_phiCbK: putative NlpC/P60 family cell wall peptidase; Vapar_2488; phage(gi414087811)  3e-15  Click
19 2627716..2630946  PHAGE_Tetras_SI1: hypothetical protein; Vapar_2489; phage(gi472342233)  7e-52  Click
20 2630943..2633180  PHAGE_Cyanop_PSS2: capsid decoration protein; Vapar_2490; phage(gi254729536)  2e-22  Click
21 2633243..2633575  PHAGE_Burkho_BcepC6B: putative holin protein; Vapar_2491; phage(gi48697210)  6e-06  Click
22 2633572..2633877  hypothetical protein; Vapar_2492  N/A  Click
23 2633880..2634380  PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; Vapar_2493; phage(gi169257296)  6e-34  Click