Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1510648..1511433)  PHAGE_Camelp_virus: CMLV126; NT01EI_1544; phage(gi18640360)  2e-26  Click
2 complement(1511557..1511721)  hypothetical protein; NT01EI_1545  N/A  Click
3 1511831..1512292  hypothetical protein; NT01EI_1546  N/A  Click
4 complement(1512347..1512493)  hypothetical protein; NT01EI_1547  N/A  Click
5 complement(1513392..1513622)  PROPHAGE_Escher_CFT073: putative transposase; NT01EI_1548; phage(gi26246170)  3e-10  Click
6 1513602..1513874  PHAGE_Entero_P1: InsA; NT01EI_1549; phage(gi46401643)  3e-15  Click
7 1514033..1514248  PROPHAGE_Escher_MG1655: IS1 transposase B; NT01EI_1550; phage(gi16131317)  2e-08  Click
8 complement(1514256..1515356)  PHAGE_Burkho_KL1: tail tape measure; NT01EI_1551; phage(gi399528734)  8e-06  Click
9 complement(1515430..1516638)  PHAGE_Burkho_KL1: tail tape measure; NT01EI_1552; phage(gi399528734)  6e-13  Click
10 complement(1516700..1516909)  PROPHAGE_Escher_MG1655: IS1 transposase B; NT01EI_1553; phage(gi16131317)  1e-06  Click
11 complement(1517170..1517328)  PHAGE_Entero_P1: InsA; NT01EI_1554; phage(gi46401643)  2e-07  Click
Region 2, total : 32 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1916322..1924148)  PHAGE_Entero_Min27: hypothetical protein; NT01EI_1990; phage(gi170783684)  7e-138  Click
2 complement(1924389..1925645)  PROPHAGE_Escher_CFT073: transposase; NT01EI_1991; phage(gi26246249)  4e-171  Click
3 complement(1925646..1927022)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1992; phage(gi418487119)  6e-25  Click
4 complement(1927046..1927213)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1993; phage(gi418487118)  7e-08  Click
5 complement(1927306..1927686)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1994; phage(gi418487117)  5e-28  Click
6 complement(1927774..1928397)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1995; phage(gi418487116)  1e-44  Click
7 complement(1928360..1928560)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1996; phage(gi418487115)  5e-12  Click
8 complement(1928728..1930266)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1997; phage(gi418487112)  5e-78  Click
9 complement(1930263..1931831)  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp25; NT01EI_1998; phage(gi116222017)  7e-156  Click
10 1931784..1931912  hypothetical protein; NT01EI_2000  N/A  Click
11 complement(1931878..1932057)  hypothetical protein; NT01EI_1999  N/A  Click
12 complement(1932072..1934303)  PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; NT01EI_2001; phage(gi169257320)  3e-47  Click
13 complement(1934309..1934941)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2002; phage(gi418487106)  1e-61  Click
14 complement(1934971..1935552)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2003; phage(gi418487105)  1e-23  Click
15 complement(1935552..1935995)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2004; phage(gi418487104)  2e-31  Click
16 complement(1936037..1936432)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2005; phage(gi418487103)  2e-16  Click
17 complement(1936590..1937846)  PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2006; phage(gi418487102)  4e-169  Click
18 complement(1937864..1938865)  PHAGE_Escher_P13374: hypothetical protein; NT01EI_2007; phage(gi410491654)  7e-51  Click
19 1939153..1939404  hypothetical protein; NT01EI_2008  N/A  Click
20 1939394..1939675  stability protein StbE; NT01EI_2009  N/A  Click
21 complement(1939747..1941861)  PHAGE_Escher_TL_2011c: putative portal protein; NT01EI_2010; phage(gi418487074)  0.0  Click
22 complement(1941858..1943534)  PHAGE_Escher_P13374: phage terminase large subunit; NT01EI_2011; phage(gi410491652)  0.0  Click
23 complement(1943512..1944288)  PHAGE_Escher_TL_2011c: putative terminase small subunit; NT01EI_2012; phage(gi418487072)  3e-15  Click
24 complement(1944389..1944670)  PHAGE_Salmon_E1: tail protein; NT01EI_2013; phage(gi170676286)  3e-08  Click
25 complement(1945131..1945682)  PHAGE_Erwini_vB_EamP_S6: endolysin; NT01EI_2014; phage(gi422935930)  3e-64  Click
26 complement(1945685..1945984)  PHAGE_Salmon_1: bacteriophage lysis protein; holin; NT01EI_2015; phage(gi169257181)  5e-24  Click
27 complement(1946116..1946445)  hypothetical protein; NT01EI_2016  N/A  Click
28 complement(1946420..1946632)  hypothetical protein; NT01EI_2017  N/A  Click
29 complement(1946782..1946991)  PROPHAGE_Escher_Sakai: putative transposase; NT01EI_2018; phage(gi38704244)  9e-16  Click
30 complement(1947132..1947950)  hypothetical protein; NT01EI_2019  N/A  Click
31 complement(1948039..1948278)  hypothetical protein; NT01EI_2020  N/A  Click
32 complement(1948676..1949458)  PHAGE_Escher_TL_2011c: phage regulatory protein, Rha family; NT01EI_2021; phage(gi418487059)  2e-24  Click
Region 3, total : 47 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2143622..2143633  attL    AACTGGCTGCCG  N/A  Click
2 2143785..2144585  PROPHAGE_Escher_MG1655: IS3 transposase B; NT01EI_2229; phage(gi16128284)  1e-125  Click
3 2144596..2145852  PROPHAGE_Escher_CFT073: transposase; NT01EI_2230; phage(gi26246249)  2e-171  Click
4 complement(2146191..2147285)  PROPHAGE_Shewan_MR-1: IS110 family transposase; NT01EI_2231; phage(gi24375433)  3e-65  Click
5 2147377..2148678  PHAGE_Acyrth_1: hypothetical protein APSE-1_41; NT01EI_2232; phage(gi9633588)  0.0  Click
6 2148675..2148941  PHAGE_Entero_mEp390: putative excisionase; NT01EI_2233; phage(gi428782692)  7e-11  Click
7 2148941..2149951  PHAGE_Entero_mEp390: integrase; NT01EI_2234; phage(gi428782691)  2e-119  Click
8 2149995..2150035  attL    AAGACACAAAAAAACCACCTTGCGGTGGCTTAATAACAAAA  N/A  Click
9 complement(2150206..2151093)  PHAGE_Haemop_HP2: integrase; NT01EI_2235; phage(gi17981816)  2e-92  Click
10 complement(2151281..2151874)  hypothetical protein; NT01EI_2236  N/A  Click
11 2152542..2152700  hypothetical protein; NT01EI_2237  N/A  Click
12 complement(2152741..2152899)  hypothetical protein; NT01EI_2238  N/A  Click
13 2153215..2153406  hypothetical protein; NT01EI_2239  N/A  Click
14 2153419..2153628  PHAGE_Haemop_HP2: orf2(S)cox; NT01EI_2240; phage(gi17981819)  5e-06  Click
15 2153673..2153984  hypothetical protein; NT01EI_2241  N/A  Click
16 complement(2154003..2154284)  hypothetical protein; NT01EI_2242  N/A  Click
17 2154428..2154703  hypothetical protein; NT01EI_2243  N/A  Click
18 2154867..2155109  hypothetical protein; NT01EI_2244  N/A  Click
19 2155094..2155630  hypothetical protein; NT01EI_2245  N/A  Click
20 2155627..2155932  hypothetical protein; NT01EI_2246  N/A  Click
21 2156317..2156550  hypothetical protein; NT01EI_2247  N/A  Click
22 2156622..2157080  hypothetical protein; NT01EI_2248  N/A  Click
23 2157084..2159690  PHAGE_Salmon_RE_2010: replication protein; NT01EI_2249; phage(gi418489692)  5e-156  Click
24 complement(2160029..2160685)  hypothetical protein; NT01EI_2250  N/A  Click
25 complement(2160688..2161695)  PHAGE_Salmon_ST160: regulatory protein; NT01EI_2251; phage(gi318065923)  3e-11  Click
26 2161742..2161912  hypothetical protein; NT01EI_2252  N/A  Click
27 complement(2162145..2162414)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; NT01EI_2253; phage(gi148727148)  5e-09  Click
28 complement(2162473..2163528)  PHAGE_Haemop_HP2: orf15; NT01EI_2254; phage(gi17981829)  2e-85  Click
29 complement(2163503..2165308)  PHAGE_Haemop_HP2: terminase; NT01EI_2255; phage(gi17981830)  0.0  Click
30 2165496..2166395  PHAGE_Haemop_HP2: scaffold; NT01EI_2256; phage(gi17981831)  3e-41  Click
31 2166410..2167495  PHAGE_Aeromo_phiO18P: putative major capsid protein; NT01EI_2257; phage(gi148727153)  3e-83  Click
32 2167464..2168153  PHAGE_Haemop_HP2: packaging protein; NT01EI_2258; phage(gi17981833)  7e-40  Click
33 2168259..2168741  PHAGE_Haemop_HP2: packaging protein; NT01EI_2259; phage(gi17981834)  3e-20  Click
34 2168751..2169230  PHAGE_Haemop_HP2: orf21; NT01EI_2260; phage(gi17981835)  4e-16  Click
35 2169217..2169951  PHAGE_Haemop_HP2: orf22; NT01EI_2261; phage(gi17981836)  4e-10  Click
36 2169956..2171110  PHAGE_Haemop_HP2: tail sheath; NT01EI_2262; phage(gi17981837)  3e-87  Click
37 2171107..2171562  PHAGE_Haemop_HP2: tail tube; NT01EI_2263; phage(gi17981838)  3e-39  Click
38 2171566..2171856  PHAGE_Burkho_KS9: holin gp22; NT01EI_2264; phage(gi255033753)  7e-16  Click
39 2171873..2172424  PHAGE_Erwini_vB_EamP_S6: endolysin; NT01EI_2265; phage(gi422935930)  3e-64  Click
40 2172455..2172742  PHAGE_Haemop_HP2: orf26; NT01EI_2266; phage(gi17981842)  1e-11  Click
41 2172931..2175126  PHAGE_Haemop_HP2: orf27; NT01EI_2267; phage(gi17981843)  6e-118  Click
42 2175116..2175469  PHAGE_Haemop_HP2: orf28; NT01EI_2268; phage(gi17981844)  3e-26  Click
43 2175462..2176646  PHAGE_Haemop_HP2: orf29; NT01EI_2269; phage(gi17981845)  2e-117  Click
44 2176643..2177212  PHAGE_Haemop_HP2: orf30; NT01EI_2270; phage(gi17981846)  1e-38  Click
45 2177209..2178990  PHAGE_Haemop_HP2: tail fibers; NT01EI_2271; phage(gi17981847)  6e-50  Click
46 2178990..2179610  PHAGE_Entero_HK106: tail fiber assembly protein; NT01EI_2272; phage(gi428783304)  9e-36  Click
47 2179616..2180338  PHAGE_Haemop_HP2: orf33; NT01EI_2273; phage(gi17981849)  5e-13  Click
48 2180310..2180894  PHAGE_Haemop_HP2: orf34; NT01EI_2274; phage(gi17981850)  2e-26  Click
49 2180960..2182639  PHAGE_Haemop_HP2: orf35; NT01EI_2275; phage(gi17981851)  2e-90  Click
50 2183823..2183863  attR    AAGACACAAAAAAACCACCTTGCGGTGGCTTAATAACAAAA  N/A  Click
51 2196747..2196758  attR    AACTGGCTGCCG  N/A  Click
Region 4, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2182916..2182927  attL    CCAAAATCGCAC  N/A  Click
2 complement(2190595..2191080)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip079; NT01EI_2290; phage(gi20065874)  1e-29  Click
3 complement(2191437..2191580)  PHAGE_Vibrio_VHML: ORF48; NT01EI_2291; phage(gi27311215)  1e-08  Click
4 2191645..2192901  PROPHAGE_Escher_CFT073: transposase; NT01EI_2293; phage(gi26246249)  2e-171  Click
5 complement(2192892..2193452)  PHAGE_Salmon_ST64B: hypothetical protein sb54; NT01EI_2292; phage(gi23505498)  5e-41  Click
6 complement(2194292..2194843)  PHAGE_Erwini_vB_EamP_S6: endolysin; NT01EI_2294; phage(gi422935930)  4e-65  Click
7 complement(2194846..2195193)  PHAGE_Salmon_ST64B: lysis protein (holin); NT01EI_2295; phage(gi23505495)  3e-26  Click
8 complement(2195269..2195484)  hypothetical protein; NT01EI_2296  N/A  Click
9 2195802..2196245  hypothetical protein; NT01EI_2297  N/A  Click
10 complement(2196298..2196462)  PHAGE_Entero_mEp390: late gene regulator Q; NT01EI_2298; phage(gi428782710)  5e-22  Click
11 complement(2197065..2197292)  hypothetical protein; NT01EI_2299  N/A  Click
12 complement(2197310..2198044)  PHAGE_Entero_phiV10: putative replication protein p; NT01EI_2300; phage(gi155370096)  3e-46  Click
13 complement(2198041..2199039)  PHAGE_Entero_phiP27: hypothetical protein P27p17; NT01EI_2301; phage(gi18249881)  2e-28  Click
14 complement(2199032..2199871)  PHAGE_Salmon_ST64B: putative antirepressor; NT01EI_2302; phage(gi23505485)  3e-69  Click
15 2199929..2200213  hypothetical protein; NT01EI_2303  N/A  Click
16 2200218..2200586  hypothetical protein; NT01EI_2304  N/A  Click
17 2201964..2202635  PHAGE_Salmon_SPN9CC: CI protein; NT01EI_2305; phage(gi389060508)  2e-49  Click
18 2203372..2203503  hypothetical protein; NT01EI_2306  N/A  Click
19 2203704..2204318  hypothetical protein; NT01EI_2307  N/A  Click
20 2204964..2205083  hypothetical protein; NT01EI_2308  N/A  Click
21 2205197..2206561  hypothetical protein; NT01EI_2309  N/A  Click
22 complement(2206758..2208014)  PROPHAGE_Escher_CFT073: transposase; NT01EI_2310; phage(gi26246249)  4e-171  Click
23 2208432..2208557  hypothetical protein; NT01EI_2311  N/A  Click
24 complement(2208627..2209493)  hypothetical protein; NT01EI_2312  N/A  Click
25 2210934..2211185  PHAGE_Entero_mEp390: hypothetical protein; NT01EI_2313; phage(gi428782698)  2e-08  Click
26 2211366..2211377  attR    CCAAAATCGCAC  N/A  Click
27 2211414..2212547  PHAGE_Entero_mEp235: integrase; NT01EI_2314; phage(gi428781836)  2e-61  Click
Region 5, total : 38 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2995165..2995177  attL    CTCTGGCGCAAAA  N/A  Click
2 complement(3002758..3002982)  PROPHAGE_Escher_CFT073: transposase; NT01EI_3114; phage(gi26246249)  7e-24  Click
3 complement(3003021..3003188)  PHAGE_Haemop_SuMu: IS1414 transposase; NT01EI_3115; phage(gi418489079)  2e-11  Click
4 3004046..3004180  hypothetical protein; NT01EI_3116  N/A  Click
5 complement(3004218..3005204)  PHAGE_Ralsto_phiRSA1: bacteriophage gpQ; NT01EI_3117; phage(gi145708079)  2e-118  Click
6 complement(3005201..3006988)  PHAGE_Ralsto_phiRSA1: terminase; NT01EI_3118; phage(gi145708080)  0.0  Click
7 3007143..3007970  PHAGE_Pseudo_phiCTX: presumed capsid scaffold; NT01EI_3119; phage(gi17313221)  2e-66  Click
8 3007981..3009000  PHAGE_Burkho_phiE202: gp2, phage major capsid protein, P2 family; NT01EI_3120; phage(gi134288740)  4e-110  Click
9 3008997..3009650  PHAGE_Ralsto_phiRSA1: terminase; NT01EI_3121; phage(gi145708083)  1e-51  Click
10 3009736..3010203  PHAGE_Ralsto_phiRSA1: head completion/stabilization protein L; NT01EI_3122; phage(gi145708084)  2e-32  Click
11 3010519..3010896  PHAGE_Ralsto_phiRSA1: phage-related transmembrane protein; NT01EI_3123; phage(gi145708086)  2e-13  Click
12 3010893..3011204  PHAGE_Ralsto_phiRSA1: phage-related transmembrane protein; NT01EI_3124; phage(gi145708087)  2e-07  Click
13 3011182..3011772  PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp14; NT01EI_3125; phage(gi145708088)  4e-50  Click
14 3011874..3012332  PHAGE_Ralsto_phiRSA1: tail completion protein-like protein; NT01EI_3126; phage(gi145708090)  4e-33  Click
15 3012332..3012967  PHAGE_Pseudo_phiCTX: predicted tail completion; NT01EI_3127; phage(gi17313233)  4e-25  Click
16 complement(3012995..3013291)  hypothetical protein; NT01EI_3128  N/A  Click
17 complement(3013367..3013684)  hypothetical protein; NT01EI_3129  N/A  Click
18 3013863..3014462  PHAGE_Erwini_ENT90: baseplate assembly protein; NT01EI_3130; phage(gi431810950)  2e-49  Click
19 3014462..3014812  PHAGE_Ralsto_phiRSA1: gpW/gp25 family protein; NT01EI_3131; phage(gi145708094)  2e-23  Click
20 3014809..3015720  PHAGE_Erwini_ENT90: baseplate assembly protein; NT01EI_3132; phage(gi431810943)  7e-106  Click
21 3015728..3016330  PHAGE_Ralsto_phiRSA1: phage tail protein gpI; NT01EI_3133; phage(gi145708096)  5e-65  Click
22 3016327..3017433  PROPHAGE_Salmon_Ty2: variable tail fiber protein; NT01EI_3134; phage(gi29143754)  1e-56  Click
23 3017445..3017618  hypothetical protein; NT01EI_3135  N/A  Click
24 3017691..3018449  PHAGE_Vibrio_VP882: DNA adenine methylase; NT01EI_3136; phage(gi126010878)  6e-105  Click
25 3018555..3019733  PHAGE_Ralsto_phiRSA1: major tail seath protein gpFI; NT01EI_3137; phage(gi145708101)  3e-158  Click
26 3019748..3020263  PHAGE_Salmon_RE_2010: major tail tube protein; NT01EI_3138; phage(gi418489721)  8e-50  Click
27 3020273..3020569  PHAGE_Ralsto_phiRSA1: bacteriophage gpE; NT01EI_3139; phage(gi145708103)  2e-17  Click
28 3020718..3023540  PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; NT01EI_3140; phage(gi428782750)  3e-100  Click
29 3023551..3023979  PHAGE_Ralsto_phiRSA1: bacteriophage gpU; NT01EI_3141; phage(gi145708105)  2e-37  Click
30 3023976..3025025  PHAGE_Entero_2: P2 gpD-like tail protein; NT01EI_3142; phage(gi169936019)  8e-99  Click
31 complement(3025028..3026332)  hypothetical protein; NT01EI_3143  N/A  Click
32 complement(3026323..3026997)  hypothetical protein; NT01EI_3144  N/A  Click
33 3027498..3027635  PHAGE_Burkho_phiE202: gp20, conserved hypothetical protein; NT01EI_3145; phage(gi134288764)  2e-06  Click
34 3027668..3027898  PHAGE_Ralsto_phiRSA1: phage transcription activator Org/Delta; NT01EI_3146; phage(gi145708112)  4e-10  Click
35 3027984..3030641  PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp40; NT01EI_3147; phage(gi17313257)  0.0  Click
36 3030654..3031025  hypothetical protein; NT01EI_3148  N/A  Click
37 3031018..3031824  PHAGE_Pseudo_F116: DNA adenine methyltransferase; NT01EI_3149; phage(gi56692911)  4e-67  Click
38 3031860..3032114  PHAGE_Salmon_SPN1S: putative transcriptional regulator; NT01EI_3150; phage(gi374531228)  1e-09  Click
39 3032090..3032102  attR    CTCTGGCGCAAAA  N/A  Click
40 complement(3032118..3033320)  PHAGE_Salmon_SPN1S: putative integrase; NT01EI_3151; phage(gi374531221)  7e-139  Click