Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
---|---|
Accession | NC_012779 |
Length | 3,812,315 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 11 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1510648..1511433) | PHAGE_Camelp_virus: CMLV126; NT01EI_1544; phage(gi18640360) | 2e-26 | Click |
2 | complement(1511557..1511721) | hypothetical protein; NT01EI_1545 | N/A | Click |
3 | 1511831..1512292 | hypothetical protein; NT01EI_1546 | N/A | Click |
4 | complement(1512347..1512493) | hypothetical protein; NT01EI_1547 | N/A | Click |
5 | complement(1513392..1513622) | PROPHAGE_Escher_CFT073: putative transposase; NT01EI_1548; phage(gi26246170) | 3e-10 | Click |
6 | 1513602..1513874 | PHAGE_Entero_P1: InsA; NT01EI_1549; phage(gi46401643) | 3e-15 | Click |
7 | 1514033..1514248 | PROPHAGE_Escher_MG1655: IS1 transposase B; NT01EI_1550; phage(gi16131317) | 2e-08 | Click |
8 | complement(1514256..1515356) | PHAGE_Burkho_KL1: tail tape measure; NT01EI_1551; phage(gi399528734) | 8e-06 | Click |
9 | complement(1515430..1516638) | PHAGE_Burkho_KL1: tail tape measure; NT01EI_1552; phage(gi399528734) | 6e-13 | Click |
10 | complement(1516700..1516909) | PROPHAGE_Escher_MG1655: IS1 transposase B; NT01EI_1553; phage(gi16131317) | 1e-06 | Click |
11 | complement(1517170..1517328) | PHAGE_Entero_P1: InsA; NT01EI_1554; phage(gi46401643) | 2e-07 | Click |
Region 2, total : 32 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1916322..1924148) | PHAGE_Entero_Min27: hypothetical protein; NT01EI_1990; phage(gi170783684) | 7e-138 | Click |
2 | complement(1924389..1925645) | PROPHAGE_Escher_CFT073: transposase; NT01EI_1991; phage(gi26246249) | 4e-171 | Click |
3 | complement(1925646..1927022) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1992; phage(gi418487119) | 6e-25 | Click |
4 | complement(1927046..1927213) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1993; phage(gi418487118) | 7e-08 | Click |
5 | complement(1927306..1927686) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1994; phage(gi418487117) | 5e-28 | Click |
6 | complement(1927774..1928397) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1995; phage(gi418487116) | 1e-44 | Click |
7 | complement(1928360..1928560) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1996; phage(gi418487115) | 5e-12 | Click |
8 | complement(1928728..1930266) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_1997; phage(gi418487112) | 5e-78 | Click |
9 | complement(1930263..1931831) | PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp25; NT01EI_1998; phage(gi116222017) | 7e-156 | Click |
10 | 1931784..1931912 | hypothetical protein; NT01EI_2000 | N/A | Click |
11 | complement(1931878..1932057) | hypothetical protein; NT01EI_1999 | N/A | Click |
12 | complement(1932072..1934303) | PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; NT01EI_2001; phage(gi169257320) | 3e-47 | Click |
13 | complement(1934309..1934941) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2002; phage(gi418487106) | 1e-61 | Click |
14 | complement(1934971..1935552) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2003; phage(gi418487105) | 1e-23 | Click |
15 | complement(1935552..1935995) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2004; phage(gi418487104) | 2e-31 | Click |
16 | complement(1936037..1936432) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2005; phage(gi418487103) | 2e-16 | Click |
17 | complement(1936590..1937846) | PHAGE_Escher_TL_2011c: hypothetical protein; NT01EI_2006; phage(gi418487102) | 4e-169 | Click |
18 | complement(1937864..1938865) | PHAGE_Escher_P13374: hypothetical protein; NT01EI_2007; phage(gi410491654) | 7e-51 | Click |
19 | 1939153..1939404 | hypothetical protein; NT01EI_2008 | N/A | Click |
20 | 1939394..1939675 | stability protein StbE; NT01EI_2009 | N/A | Click |
21 | complement(1939747..1941861) | PHAGE_Escher_TL_2011c: putative portal protein; NT01EI_2010; phage(gi418487074) | 0.0 | Click |
22 | complement(1941858..1943534) | PHAGE_Escher_P13374: phage terminase large subunit; NT01EI_2011; phage(gi410491652) | 0.0 | Click |
23 | complement(1943512..1944288) | PHAGE_Escher_TL_2011c: putative terminase small subunit; NT01EI_2012; phage(gi418487072) | 3e-15 | Click |
24 | complement(1944389..1944670) | PHAGE_Salmon_E1: tail protein; NT01EI_2013; phage(gi170676286) | 3e-08 | Click |
25 | complement(1945131..1945682) | PHAGE_Erwini_vB_EamP_S6: endolysin; NT01EI_2014; phage(gi422935930) | 3e-64 | Click |
26 | complement(1945685..1945984) | PHAGE_Salmon_1: bacteriophage lysis protein; holin; NT01EI_2015; phage(gi169257181) | 5e-24 | Click |
27 | complement(1946116..1946445) | hypothetical protein; NT01EI_2016 | N/A | Click |
28 | complement(1946420..1946632) | hypothetical protein; NT01EI_2017 | N/A | Click |
29 | complement(1946782..1946991) | PROPHAGE_Escher_Sakai: putative transposase; NT01EI_2018; phage(gi38704244) | 9e-16 | Click |
30 | complement(1947132..1947950) | hypothetical protein; NT01EI_2019 | N/A | Click |
31 | complement(1948039..1948278) | hypothetical protein; NT01EI_2020 | N/A | Click |
32 | complement(1948676..1949458) | PHAGE_Escher_TL_2011c: phage regulatory protein, Rha family; NT01EI_2021; phage(gi418487059) | 2e-24 | Click |
Region 3, total : 47 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2143622..2143633 | attL AACTGGCTGCCG | N/A | Click |
2 | 2143785..2144585 | PROPHAGE_Escher_MG1655: IS3 transposase B; NT01EI_2229; phage(gi16128284) | 1e-125 | Click |
3 | 2144596..2145852 | PROPHAGE_Escher_CFT073: transposase; NT01EI_2230; phage(gi26246249) | 2e-171 | Click |
4 | complement(2146191..2147285) | PROPHAGE_Shewan_MR-1: IS110 family transposase; NT01EI_2231; phage(gi24375433) | 3e-65 | Click |
5 | 2147377..2148678 | PHAGE_Acyrth_1: hypothetical protein APSE-1_41; NT01EI_2232; phage(gi9633588) | 0.0 | Click |
6 | 2148675..2148941 | PHAGE_Entero_mEp390: putative excisionase; NT01EI_2233; phage(gi428782692) | 7e-11 | Click |
7 | 2148941..2149951 | PHAGE_Entero_mEp390: integrase; NT01EI_2234; phage(gi428782691) | 2e-119 | Click |
8 | 2149995..2150035 | attL AAGACACAAAAAAACCACCTTGCGGTGGCTTAATAACAAAA | N/A | Click |
9 | complement(2150206..2151093) | PHAGE_Haemop_HP2: integrase; NT01EI_2235; phage(gi17981816) | 2e-92 | Click |
10 | complement(2151281..2151874) | hypothetical protein; NT01EI_2236 | N/A | Click |
11 | 2152542..2152700 | hypothetical protein; NT01EI_2237 | N/A | Click |
12 | complement(2152741..2152899) | hypothetical protein; NT01EI_2238 | N/A | Click |
13 | 2153215..2153406 | hypothetical protein; NT01EI_2239 | N/A | Click |
14 | 2153419..2153628 | PHAGE_Haemop_HP2: orf2(S)cox; NT01EI_2240; phage(gi17981819) | 5e-06 | Click |
15 | 2153673..2153984 | hypothetical protein; NT01EI_2241 | N/A | Click |
16 | complement(2154003..2154284) | hypothetical protein; NT01EI_2242 | N/A | Click |
17 | 2154428..2154703 | hypothetical protein; NT01EI_2243 | N/A | Click |
18 | 2154867..2155109 | hypothetical protein; NT01EI_2244 | N/A | Click |
19 | 2155094..2155630 | hypothetical protein; NT01EI_2245 | N/A | Click |
20 | 2155627..2155932 | hypothetical protein; NT01EI_2246 | N/A | Click |
21 | 2156317..2156550 | hypothetical protein; NT01EI_2247 | N/A | Click |
22 | 2156622..2157080 | hypothetical protein; NT01EI_2248 | N/A | Click |
23 | 2157084..2159690 | PHAGE_Salmon_RE_2010: replication protein; NT01EI_2249; phage(gi418489692) | 5e-156 | Click |
24 | complement(2160029..2160685) | hypothetical protein; NT01EI_2250 | N/A | Click |
25 | complement(2160688..2161695) | PHAGE_Salmon_ST160: regulatory protein; NT01EI_2251; phage(gi318065923) | 3e-11 | Click |
26 | 2161742..2161912 | hypothetical protein; NT01EI_2252 | N/A | Click |
27 | complement(2162145..2162414) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; NT01EI_2253; phage(gi148727148) | 5e-09 | Click |
28 | complement(2162473..2163528) | PHAGE_Haemop_HP2: orf15; NT01EI_2254; phage(gi17981829) | 2e-85 | Click |
29 | complement(2163503..2165308) | PHAGE_Haemop_HP2: terminase; NT01EI_2255; phage(gi17981830) | 0.0 | Click |
30 | 2165496..2166395 | PHAGE_Haemop_HP2: scaffold; NT01EI_2256; phage(gi17981831) | 3e-41 | Click |
31 | 2166410..2167495 | PHAGE_Aeromo_phiO18P: putative major capsid protein; NT01EI_2257; phage(gi148727153) | 3e-83 | Click |
32 | 2167464..2168153 | PHAGE_Haemop_HP2: packaging protein; NT01EI_2258; phage(gi17981833) | 7e-40 | Click |
33 | 2168259..2168741 | PHAGE_Haemop_HP2: packaging protein; NT01EI_2259; phage(gi17981834) | 3e-20 | Click |
34 | 2168751..2169230 | PHAGE_Haemop_HP2: orf21; NT01EI_2260; phage(gi17981835) | 4e-16 | Click |
35 | 2169217..2169951 | PHAGE_Haemop_HP2: orf22; NT01EI_2261; phage(gi17981836) | 4e-10 | Click |
36 | 2169956..2171110 | PHAGE_Haemop_HP2: tail sheath; NT01EI_2262; phage(gi17981837) | 3e-87 | Click |
37 | 2171107..2171562 | PHAGE_Haemop_HP2: tail tube; NT01EI_2263; phage(gi17981838) | 3e-39 | Click |
38 | 2171566..2171856 | PHAGE_Burkho_KS9: holin gp22; NT01EI_2264; phage(gi255033753) | 7e-16 | Click |
39 | 2171873..2172424 | PHAGE_Erwini_vB_EamP_S6: endolysin; NT01EI_2265; phage(gi422935930) | 3e-64 | Click |
40 | 2172455..2172742 | PHAGE_Haemop_HP2: orf26; NT01EI_2266; phage(gi17981842) | 1e-11 | Click |
41 | 2172931..2175126 | PHAGE_Haemop_HP2: orf27; NT01EI_2267; phage(gi17981843) | 6e-118 | Click |
42 | 2175116..2175469 | PHAGE_Haemop_HP2: orf28; NT01EI_2268; phage(gi17981844) | 3e-26 | Click |
43 | 2175462..2176646 | PHAGE_Haemop_HP2: orf29; NT01EI_2269; phage(gi17981845) | 2e-117 | Click |
44 | 2176643..2177212 | PHAGE_Haemop_HP2: orf30; NT01EI_2270; phage(gi17981846) | 1e-38 | Click |
45 | 2177209..2178990 | PHAGE_Haemop_HP2: tail fibers; NT01EI_2271; phage(gi17981847) | 6e-50 | Click |
46 | 2178990..2179610 | PHAGE_Entero_HK106: tail fiber assembly protein; NT01EI_2272; phage(gi428783304) | 9e-36 | Click |
47 | 2179616..2180338 | PHAGE_Haemop_HP2: orf33; NT01EI_2273; phage(gi17981849) | 5e-13 | Click |
48 | 2180310..2180894 | PHAGE_Haemop_HP2: orf34; NT01EI_2274; phage(gi17981850) | 2e-26 | Click |
49 | 2180960..2182639 | PHAGE_Haemop_HP2: orf35; NT01EI_2275; phage(gi17981851) | 2e-90 | Click |
50 | 2183823..2183863 | attR AAGACACAAAAAAACCACCTTGCGGTGGCTTAATAACAAAA | N/A | Click |
51 | 2196747..2196758 | attR AACTGGCTGCCG | N/A | Click |
Region 4, total : 25 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2182916..2182927 | attL CCAAAATCGCAC | N/A | Click |
2 | complement(2190595..2191080) | PHAGE_Stx2_c_I: hypothetical protein Stx2Ip079; NT01EI_2290; phage(gi20065874) | 1e-29 | Click |
3 | complement(2191437..2191580) | PHAGE_Vibrio_VHML: ORF48; NT01EI_2291; phage(gi27311215) | 1e-08 | Click |
4 | 2191645..2192901 | PROPHAGE_Escher_CFT073: transposase; NT01EI_2293; phage(gi26246249) | 2e-171 | Click |
5 | complement(2192892..2193452) | PHAGE_Salmon_ST64B: hypothetical protein sb54; NT01EI_2292; phage(gi23505498) | 5e-41 | Click |
6 | complement(2194292..2194843) | PHAGE_Erwini_vB_EamP_S6: endolysin; NT01EI_2294; phage(gi422935930) | 4e-65 | Click |
7 | complement(2194846..2195193) | PHAGE_Salmon_ST64B: lysis protein (holin); NT01EI_2295; phage(gi23505495) | 3e-26 | Click |
8 | complement(2195269..2195484) | hypothetical protein; NT01EI_2296 | N/A | Click |
9 | 2195802..2196245 | hypothetical protein; NT01EI_2297 | N/A | Click |
10 | complement(2196298..2196462) | PHAGE_Entero_mEp390: late gene regulator Q; NT01EI_2298; phage(gi428782710) | 5e-22 | Click |
11 | complement(2197065..2197292) | hypothetical protein; NT01EI_2299 | N/A | Click |
12 | complement(2197310..2198044) | PHAGE_Entero_phiV10: putative replication protein p; NT01EI_2300; phage(gi155370096) | 3e-46 | Click |
13 | complement(2198041..2199039) | PHAGE_Entero_phiP27: hypothetical protein P27p17; NT01EI_2301; phage(gi18249881) | 2e-28 | Click |
14 | complement(2199032..2199871) | PHAGE_Salmon_ST64B: putative antirepressor; NT01EI_2302; phage(gi23505485) | 3e-69 | Click |
15 | 2199929..2200213 | hypothetical protein; NT01EI_2303 | N/A | Click |
16 | 2200218..2200586 | hypothetical protein; NT01EI_2304 | N/A | Click |
17 | 2201964..2202635 | PHAGE_Salmon_SPN9CC: CI protein; NT01EI_2305; phage(gi389060508) | 2e-49 | Click |
18 | 2203372..2203503 | hypothetical protein; NT01EI_2306 | N/A | Click |
19 | 2203704..2204318 | hypothetical protein; NT01EI_2307 | N/A | Click |
20 | 2204964..2205083 | hypothetical protein; NT01EI_2308 | N/A | Click |
21 | 2205197..2206561 | hypothetical protein; NT01EI_2309 | N/A | Click |
22 | complement(2206758..2208014) | PROPHAGE_Escher_CFT073: transposase; NT01EI_2310; phage(gi26246249) | 4e-171 | Click |
23 | 2208432..2208557 | hypothetical protein; NT01EI_2311 | N/A | Click |
24 | complement(2208627..2209493) | hypothetical protein; NT01EI_2312 | N/A | Click |
25 | 2210934..2211185 | PHAGE_Entero_mEp390: hypothetical protein; NT01EI_2313; phage(gi428782698) | 2e-08 | Click |
26 | 2211366..2211377 | attR CCAAAATCGCAC | N/A | Click |
27 | 2211414..2212547 | PHAGE_Entero_mEp235: integrase; NT01EI_2314; phage(gi428781836) | 2e-61 | Click |
Region 5, total : 38 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2995165..2995177 | attL CTCTGGCGCAAAA | N/A | Click |
2 | complement(3002758..3002982) | PROPHAGE_Escher_CFT073: transposase; NT01EI_3114; phage(gi26246249) | 7e-24 | Click |
3 | complement(3003021..3003188) | PHAGE_Haemop_SuMu: IS1414 transposase; NT01EI_3115; phage(gi418489079) | 2e-11 | Click |
4 | 3004046..3004180 | hypothetical protein; NT01EI_3116 | N/A | Click |
5 | complement(3004218..3005204) | PHAGE_Ralsto_phiRSA1: bacteriophage gpQ; NT01EI_3117; phage(gi145708079) | 2e-118 | Click |
6 | complement(3005201..3006988) | PHAGE_Ralsto_phiRSA1: terminase; NT01EI_3118; phage(gi145708080) | 0.0 | Click |
7 | 3007143..3007970 | PHAGE_Pseudo_phiCTX: presumed capsid scaffold; NT01EI_3119; phage(gi17313221) | 2e-66 | Click |
8 | 3007981..3009000 | PHAGE_Burkho_phiE202: gp2, phage major capsid protein, P2 family; NT01EI_3120; phage(gi134288740) | 4e-110 | Click |
9 | 3008997..3009650 | PHAGE_Ralsto_phiRSA1: terminase; NT01EI_3121; phage(gi145708083) | 1e-51 | Click |
10 | 3009736..3010203 | PHAGE_Ralsto_phiRSA1: head completion/stabilization protein L; NT01EI_3122; phage(gi145708084) | 2e-32 | Click |
11 | 3010519..3010896 | PHAGE_Ralsto_phiRSA1: phage-related transmembrane protein; NT01EI_3123; phage(gi145708086) | 2e-13 | Click |
12 | 3010893..3011204 | PHAGE_Ralsto_phiRSA1: phage-related transmembrane protein; NT01EI_3124; phage(gi145708087) | 2e-07 | Click |
13 | 3011182..3011772 | PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp14; NT01EI_3125; phage(gi145708088) | 4e-50 | Click |
14 | 3011874..3012332 | PHAGE_Ralsto_phiRSA1: tail completion protein-like protein; NT01EI_3126; phage(gi145708090) | 4e-33 | Click |
15 | 3012332..3012967 | PHAGE_Pseudo_phiCTX: predicted tail completion; NT01EI_3127; phage(gi17313233) | 4e-25 | Click |
16 | complement(3012995..3013291) | hypothetical protein; NT01EI_3128 | N/A | Click |
17 | complement(3013367..3013684) | hypothetical protein; NT01EI_3129 | N/A | Click |
18 | 3013863..3014462 | PHAGE_Erwini_ENT90: baseplate assembly protein; NT01EI_3130; phage(gi431810950) | 2e-49 | Click |
19 | 3014462..3014812 | PHAGE_Ralsto_phiRSA1: gpW/gp25 family protein; NT01EI_3131; phage(gi145708094) | 2e-23 | Click |
20 | 3014809..3015720 | PHAGE_Erwini_ENT90: baseplate assembly protein; NT01EI_3132; phage(gi431810943) | 7e-106 | Click |
21 | 3015728..3016330 | PHAGE_Ralsto_phiRSA1: phage tail protein gpI; NT01EI_3133; phage(gi145708096) | 5e-65 | Click |
22 | 3016327..3017433 | PROPHAGE_Salmon_Ty2: variable tail fiber protein; NT01EI_3134; phage(gi29143754) | 1e-56 | Click |
23 | 3017445..3017618 | hypothetical protein; NT01EI_3135 | N/A | Click |
24 | 3017691..3018449 | PHAGE_Vibrio_VP882: DNA adenine methylase; NT01EI_3136; phage(gi126010878) | 6e-105 | Click |
25 | 3018555..3019733 | PHAGE_Ralsto_phiRSA1: major tail seath protein gpFI; NT01EI_3137; phage(gi145708101) | 3e-158 | Click |
26 | 3019748..3020263 | PHAGE_Salmon_RE_2010: major tail tube protein; NT01EI_3138; phage(gi418489721) | 8e-50 | Click |
27 | 3020273..3020569 | PHAGE_Ralsto_phiRSA1: bacteriophage gpE; NT01EI_3139; phage(gi145708103) | 2e-17 | Click |
28 | 3020718..3023540 | PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; NT01EI_3140; phage(gi428782750) | 3e-100 | Click |
29 | 3023551..3023979 | PHAGE_Ralsto_phiRSA1: bacteriophage gpU; NT01EI_3141; phage(gi145708105) | 2e-37 | Click |
30 | 3023976..3025025 | PHAGE_Entero_2: P2 gpD-like tail protein; NT01EI_3142; phage(gi169936019) | 8e-99 | Click |
31 | complement(3025028..3026332) | hypothetical protein; NT01EI_3143 | N/A | Click |
32 | complement(3026323..3026997) | hypothetical protein; NT01EI_3144 | N/A | Click |
33 | 3027498..3027635 | PHAGE_Burkho_phiE202: gp20, conserved hypothetical protein; NT01EI_3145; phage(gi134288764) | 2e-06 | Click |
34 | 3027668..3027898 | PHAGE_Ralsto_phiRSA1: phage transcription activator Org/Delta; NT01EI_3146; phage(gi145708112) | 4e-10 | Click |
35 | 3027984..3030641 | PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp40; NT01EI_3147; phage(gi17313257) | 0.0 | Click |
36 | 3030654..3031025 | hypothetical protein; NT01EI_3148 | N/A | Click |
37 | 3031018..3031824 | PHAGE_Pseudo_F116: DNA adenine methyltransferase; NT01EI_3149; phage(gi56692911) | 4e-67 | Click |
38 | 3031860..3032114 | PHAGE_Salmon_SPN1S: putative transcriptional regulator; NT01EI_3150; phage(gi374531228) | 1e-09 | Click |
39 | 3032090..3032102 | attR CTCTGGCGCAAAA | N/A | Click |
40 | complement(3032118..3033320) | PHAGE_Salmon_SPN1S: putative integrase; NT01EI_3151; phage(gi374531221) | 7e-139 | Click |